RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 NAPBQ9H115 298 aa16.3■□□□□ 0.2
NEK3-210ENST00000620675 ANO2Q9NQ90 1003 aa16.3■□□□□ 0.2
NEK3-210ENST00000620675 CTDSPL2Q05D32 466 aa16.29■□□□□ 0.2
NEK3-210ENST00000620675 DSCC1Q9BVC3 393 aa16.29■□□□□ 0.2
NEK3-210ENST00000620675 MFAP1P55081 439 aaKnown RBP16.28■□□□□ 0.2
NEK3-210ENST00000620675 ALX1Q15699 326 aa16.28■□□□□ 0.2
NEK3-210ENST00000620675 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
NEK3-210ENST00000620675 USP2O75604 605 aaPredicted RBP16.28■□□□□ 0.2
NEK3-210ENST00000620675 CASC1Q6TDU7 716 aa16.28■□□□□ 0.2
NEK3-210ENST00000620675 MAP4K1Q92918 833 aa16.28■□□□□ 0.2
NEK3-210ENST00000620675 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.28■□□□□ 0.2
NEK3-210ENST00000620675 PI4KBQ9UBF8 816 aa16.28■□□□□ 0.2
NEK3-210ENST00000620675 JAG1P78504 1218 aa16.27■□□□□ 0.2
NEK3-210ENST00000620675 GABPAQ06546 454 aa16.27■□□□□ 0.2
NEK3-210ENST00000620675 FSTL1Q12841 308 aa16.27■□□□□ 0.2
NEK3-210ENST00000620675 SBK1Q52WX2 424 aa16.27■□□□□ 0.2
NEK3-210ENST00000620675 NACAP1Q9BZK3 213 aa16.27■□□□□ 0.2
NEK3-210ENST00000620675 DHX36Q9H2U1 1008 aaKnown RBP16.27■□□□□ 0.2
NEK3-210ENST00000620675 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.27■□□□□ 0.2
NEK3-210ENST00000620675 RBM8AQ9Y5S9 174 aaKnown RBP16.27■□□□□ 0.2
NEK3-210ENST00000620675 INPP5BP32019 993 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 HTRA3P83110 453 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 PPARAQ07869 468 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 SUPT20HL1Q3ZLR7 823 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 ARPP21Q9UBL0 812 aaPredicted RBP16.26■□□□□ 0.19
NEK3-210ENST00000620675 ANGEL1Q9UNK9 670 aaKnown RBP16.26■□□□□ 0.19
NEK3-210ENST00000620675 DOCK1Q14185 1865 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 PHF20L1A8MW92 1017 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 UBE2Q2LH0YL09 131 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 PRDM1O75626 825 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 SHMT1P34896 483 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 MAP3K10Q02779 954 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 COL9A3Q14050 684 aaPredicted RBP16.26■□□□□ 0.19
NEK3-210ENST00000620675 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 METTL16Q86W50 562 aaKnown RBP16.26■□□□□ 0.19
NEK3-210ENST00000620675 DDRGK1Q96HY6 314 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.26■□□□□ 0.19
NEK3-210ENST00000620675 SERPINB13Q9UIV8 391 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 PHIPQ8WWQ0 1821 aa16.26■□□□□ 0.19
NEK3-210ENST00000620675 HLA-DOAP06340 250 aa16.25■□□□□ 0.19
NEK3-210ENST00000620675 TTLL12Q14166 644 aaPredicted RBP16.25■□□□□ 0.19
NEK3-210ENST00000620675 TBC1D10CQ8IV04 446 aa16.25■□□□□ 0.19
NEK3-210ENST00000620675 ZKSCAN4Q969J2 545 aaPredicted RBP16.25■□□□□ 0.19
NEK3-210ENST00000620675 CLMNQ96JQ2 1002 aa16.25■□□□□ 0.19
NEK3-210ENST00000620675 GBA2Q9HCG7 927 aaPredicted RBP16.25■□□□□ 0.19
NEK3-210ENST00000620675 ZMYM6O95789 1325 aa16.25■□□□□ 0.19
NEK3-210ENST00000620675 CYP21A2P08686 494 aa16.25■□□□□ 0.19
NEK3-210ENST00000620675 KIAA1211Q6ZU35 1233 aa16.25■□□□□ 0.19
NEK3-210ENST00000620675 CRACR2BQ8N4Y2 399 aaPredicted RBP16.25■□□□□ 0.19
NEK3-210ENST00000620675 KLRG1Q96E93 195 aa16.25■□□□□ 0.19
NEK3-210ENST00000620675 GDF11O95390 407 aa16.24■□□□□ 0.19
NEK3-210ENST00000620675 CDK8P49336 464 aa16.24■□□□□ 0.19
NEK3-210ENST00000620675 CCDC84Q86UT8 332 aaPredicted RBP16.24■□□□□ 0.19
NEK3-210ENST00000620675 WRNIP1Q96S55 665 aa16.24■□□□□ 0.19
NEK3-210ENST00000620675 EHD4Q9H223 541 aa16.24■□□□□ 0.19
NEK3-210ENST00000620675 ROBO3Q96MS0 1386 aa16.24■□□□□ 0.19
NEK3-210ENST00000620675 GREB1LQ9C091 1923 aaPredicted RBP16.23■□□□□ 0.19
NEK3-210ENST00000620675 NF2P35240 595 aa16.23■□□□□ 0.19
NEK3-210ENST00000620675 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.23■□□□□ 0.19
NEK3-210ENST00000620675 C16orf86Q6ZW13 317 aa16.23■□□□□ 0.19
NEK3-210ENST00000620675 FOXP4Q8IVH2 680 aaPredicted RBP16.23■□□□□ 0.19
NEK3-210ENST00000620675 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.23■□□□□ 0.19
NEK3-210ENST00000620675 TBC1D12O60347 775 aa16.23■□□□□ 0.19
NEK3-210ENST00000620675 NECTIN1Q15223 517 aa16.23■□□□□ 0.19
NEK3-210ENST00000620675 CNKSR2Q8WXI2 1034 aa16.23■□□□□ 0.19
NEK3-210ENST00000620675 ZNF341Q9BYN7 854 aa16.23■□□□□ 0.19
NEK3-210ENST00000620675 ZNF112Q9UJU3 913 aa16.23■□□□□ 0.19
NEK3-210ENST00000620675 PTPRFP10586 1907 aa16.22■□□□□ 0.19
NEK3-210ENST00000620675 PPP1R12BO60237 982 aaPredicted RBP16.22■□□□□ 0.19
NEK3-210ENST00000620675 DCAF15Q66K64 600 aa16.22■□□□□ 0.19
NEK3-210ENST00000620675 STOX1Q6ZVD7 989 aa16.22■□□□□ 0.19
NEK3-210ENST00000620675 RASEFQ8IZ41 740 aa16.22■□□□□ 0.19
NEK3-210ENST00000620675 HERC5Q9UII4 1024 aaKnown RBP16.22■□□□□ 0.19
NEK3-210ENST00000620675 ANAPC4Q9UJX5 808 aa16.22■□□□□ 0.19
NEK3-210ENST00000620675 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
NEK3-210ENST00000620675 NEDD4P46934 1319 aa16.22■□□□□ 0.19
NEK3-210ENST00000620675 MYH4Q9Y623 1939 aa16.22■□□□□ 0.19
NEK3-210ENST00000620675 SLC27A2O14975 620 aa16.22■□□□□ 0.19
NEK3-210ENST00000620675 VGLL4Q14135 290 aa16.22■□□□□ 0.19
NEK3-210ENST00000620675 CREB3L3Q68CJ9 461 aa16.22■□□□□ 0.19
NEK3-210ENST00000620675 TATDN1Q6P1N9 297 aa16.22■□□□□ 0.19
NEK3-210ENST00000620675 AMOTL1Q8IY63 956 aa16.22■□□□□ 0.19
NEK3-210ENST00000620675 USP26Q9BXU7 913 aa16.22■□□□□ 0.19
NEK3-210ENST00000620675 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.22■□□□□ 0.19
NEK3-210ENST00000620675 TMEM88BA6NKF7 163 aa16.21■□□□□ 0.19
NEK3-210ENST00000620675 ZNF213O14771 459 aa16.21■□□□□ 0.19
NEK3-210ENST00000620675 AKR1B1P15121 316 aa16.21■□□□□ 0.19
NEK3-210ENST00000620675 RASA1P20936 1047 aa16.21■□□□□ 0.19
NEK3-210ENST00000620675 APLP1P51693 650 aa16.21■□□□□ 0.19
NEK3-210ENST00000620675 C1QTNF8P60827 252 aa16.21■□□□□ 0.19
NEK3-210ENST00000620675 MAP3K11Q16584 847 aa16.21■□□□□ 0.19
NEK3-210ENST00000620675 LDLRAD1Q5T700 205 aa16.21■□□□□ 0.19
NEK3-210ENST00000620675 SAPCD2Q86UD0 394 aa16.21■□□□□ 0.19
NEK3-210ENST00000620675 CLEC10AQ8IUN9 316 aa16.21■□□□□ 0.19
NEK3-210ENST00000620675 C2orf69Q8N8R5 385 aa16.21■□□□□ 0.19
NEK3-210ENST00000620675 TRIM34Q9BYJ4 488 aa16.21■□□□□ 0.19
NEK3-210ENST00000620675 HUNKP57058 714 aa16.2■□□□□ 0.18
NEK3-210ENST00000620675 FAM47AQ5JRC9 791 aa16.2■□□□□ 0.18
NEK3-210ENST00000620675 SNCAIPQ9Y6H5 919 aa16.2■□□□□ 0.18
NEK3-210ENST00000620675 REC8O95072 547 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms