RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, human

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-223	ENST00000620507	PLEKHG2	Q9H7P9	1386 aa		10.52	□□□□□ -0.73
RBFOX1-223	ENST00000620507	PPP6R2	O75170	966 aa		10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	ARID4A	P29374	1257 aa	Predicted RBP	10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	ZNF174	Q15697	407 aa		10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	PYM1	Q9BRP8	204 aa	Known RBP	10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CCNL1	Q9UK58	526 aa	Predicted RBP	10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	COL5A2	P05997	1499 aa	Predicted RBP	10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	LRRC37A3	O60309	1634 aa		10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	FDPS	P14324	419 aa	Known RBP	10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CALML3	P27482	149 aa		10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	GNAQ	P50148	359 aa		10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	NEDD4	P46934	1319 aa		10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	VWA3A	A6NCI4	1184 aa		10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	FMNL1	O95466	1100 aa	Predicted RBP	10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	POSTN	Q15063	836 aa		10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	ERFE	Q4G0M1	354 aa		10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	ZNF34	Q8IZ26	560 aa		10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	FUCA2	Q9BTY2	467 aa		10.51	□□□□□ -0.73
RBFOX1-223	ENST00000620507	MCM7	P33993	719 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	EIF5	P55010	431 aa	Known RBP	10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	ANTXR2	P58335	489 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	SLF2	Q8IX21	1173 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	VAT1L	Q9HCJ6	419 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CGN	Q9P2M7	1197 aa	Known RBP	10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	UBAP1L	F5GYI3	381 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CDC27	P30260	824 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	STX17	P56962	302 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	ALX1	Q15699	326 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	DNAI1	Q9UI46	699 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CDC25B	P30305	580 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	ARHGAP29	Q52LW3	1261 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	FAM47A	Q5JRC9	791 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	KRBA2	Q6ZNG9	492 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	HEATR3	Q7Z4Q2	680 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	ZNF804A	Q7Z570	1209 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	MLKL	Q8NB16	471 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	AGXT2	Q9BYV1	514 aa		10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	THRAP3	Q9Y2W1	955 aa	Known RBP	10.5	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CCDC178	Q5BJE1	867 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	RRAGB	Q5VZM2	374 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	IQUB	Q8NA54	791 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	TIGD1	Q96MW7	591 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	LY9	Q9HBG7	655 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	TCP11L1	Q9NUJ3	509 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	SERTAD1	Q9UHV2	236 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	NFE2L3	Q9Y4A8	694 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	PCDHA5	Q9Y5H7	936 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	GSG1L2	A8MUP6	293 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	N4BP3	O15049	544 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	IK	Q13123	557 aa	Predicted RBP	10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	TRAPPC3L	Q5T215	181 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CCDC12	Q8WUD4	166 aa	Predicted RBP	10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507		V9GYY5	206 aa	Predicted RBP	10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	MMP1	P03956	469 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	DYNLL1	P63167	89 aa	Known RBP	10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	NR5A1	Q13285	461 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	SYT10	Q6XYQ8	523 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	PIK3AP1	Q6ZUJ8	805 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CCDC148	Q8NFR7	591 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	FOXP1	Q9H334	677 aa	Predicted RBP	10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	LMO7	Q8WWI1	1683 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	GOLGA6L9	A6NEM1	432 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	KIF28P	B7ZC32	967 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	GNG11	P61952	73 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	TTC38	Q5R3I4	469 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	SARM1	Q6SZW1	724 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CLEC4G	Q6UXB4	293 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	SGMS1	Q86VZ5	419 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	PLA2G4D	Q86XP0	818 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CNBD1	Q8NA66	436 aa		10.49	□□□□□ -0.73
RBFOX1-223	ENST00000620507	SPDYE4	A6NLX3	237 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CASQ1	P31415	396 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	STAT6	P42226	847 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	STAG1	Q8WVM7	1258 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CTAGE1	Q96RT6	745 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	RNF26	Q9BY78	433 aa	Predicted RBP	10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	TMX1	Q9H3N1	280 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	MED1	Q15648	1581 aa	Predicted RBP	10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	SLU7	O95391	586 aa	Known RBP	10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	ST5	P78524	1137 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	WDR66	Q8TBY9	1149 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	NUP88	Q99567	741 aa	Predicted RBP	10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	RMND1	Q9NWS8	449 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	HPS5	Q9UPZ3	1129 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	RGPD2	P0DJD1	1756 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CAMTA1	Q9Y6Y1	1673 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	UBN2	Q6ZU65	1347 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	CYP2D7	A0A087X1C5	515 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	GPS2	Q13227	327 aa		10.48	□□□□□ -0.73
RBFOX1-223	ENST00000620507	BCL2L12	Q9HB09	334 aa		10.48	□□□□□ -0.73

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