RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 FAM163AQ96GL9 167 aaPredicted RBP10.8□□□□□ -0.68
TARDBP-222ENST00000620505 PHF12Q96QT6 1004 aa10.8□□□□□ -0.68
TARDBP-222ENST00000620505 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.8□□□□□ -0.68
TARDBP-222ENST00000620505 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
TARDBP-222ENST00000620505 IPO8O15397 1037 aaKnown RBP10.79□□□□□ -0.68
TARDBP-222ENST00000620505 CTNND1O60716 968 aaKnown RBP10.79□□□□□ -0.68
TARDBP-222ENST00000620505 CCL5P13501 91 aa10.79□□□□□ -0.68
TARDBP-222ENST00000620505 MCAMP43121 646 aa10.79□□□□□ -0.68
TARDBP-222ENST00000620505 ATF7IPQ6VMQ6 1270 aa10.79□□□□□ -0.68
TARDBP-222ENST00000620505 FASTKD5Q7L8L6 764 aaKnown RBP10.79□□□□□ -0.68
TARDBP-222ENST00000620505 TMEM57Q8N5G2 664 aa10.79□□□□□ -0.68
TARDBP-222ENST00000620505 SMCR8Q8TEV9 937 aaPredicted RBP10.79□□□□□ -0.68
TARDBP-222ENST00000620505 NSUN4Q96CB9 384 aaKnown RBP10.79□□□□□ -0.68
TARDBP-222ENST00000620505 SHISA4Q96DD7 197 aa10.79□□□□□ -0.68
TARDBP-222ENST00000620505 C1orf115Q9H7X2 142 aa10.79□□□□□ -0.68
TARDBP-222ENST00000620505 LRP2BPQ9P2M1 347 aa10.79□□□□□ -0.68
TARDBP-222ENST00000620505 PDS5AQ29RF7 1337 aaKnown RBP10.79□□□□□ -0.68
TARDBP-222ENST00000620505 HTTP42858 3142 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 H0YGN5 161 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 TNPO2O14787 897 aaKnown RBP10.78□□□□□ -0.68
TARDBP-222ENST00000620505 LDHCP07864 332 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 ELNP15502 786 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 GSTO1P78417 241 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 MAP3K10Q02779 954 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 SPP2Q13103 211 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 OS9Q13438 667 aaPredicted RBP10.78□□□□□ -0.68
TARDBP-222ENST00000620505 RRP1BQ14684 758 aaKnown RBP10.78□□□□□ -0.68
TARDBP-222ENST00000620505 TTC39AQ5SRH9 613 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 TREML2Q5T2D2 321 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 TEX11Q8IYF3 940 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 ANKRD13CQ8N6S4 541 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 SH3RF3Q8TEJ3 882 aaPredicted RBP10.78□□□□□ -0.68
TARDBP-222ENST00000620505 DPF3Q92784 378 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 RNF208Q9H0X6 261 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 UNC93B1Q9H1C4 597 aa10.78□□□□□ -0.68
TARDBP-222ENST00000620505 COLQQ9Y215 455 aaPredicted RBP10.78□□□□□ -0.68
TARDBP-222ENST00000620505 DOCK1Q14185 1865 aa10.77□□□□□ -0.69
TARDBP-222ENST00000620505 ADCY3O60266 1144 aa10.77□□□□□ -0.69
TARDBP-222ENST00000620505 ARID4AP29374 1257 aaPredicted RBP10.77□□□□□ -0.69
TARDBP-222ENST00000620505 FLT3LGP49771 235 aa10.77□□□□□ -0.69
TARDBP-222ENST00000620505 UBXN2AP68543 259 aa10.77□□□□□ -0.69
TARDBP-222ENST00000620505 DBNDD2Q9BQY9 259 aa10.77□□□□□ -0.69
TARDBP-222ENST00000620505 OSBPL5Q9H0X9 879 aaPredicted RBP10.77□□□□□ -0.69
TARDBP-222ENST00000620505 AATFQ9NY61 560 aaKnown RBP eCLIP10.77□□□□□ -0.69
TARDBP-222ENST00000620505 TBC1D12O60347 775 aa10.76□□□□□ -0.69
TARDBP-222ENST00000620505 SURF6O75683 361 aaKnown RBP10.76□□□□□ -0.69
TARDBP-222ENST00000620505 UQCRFS1P1P0C7P4 283 aa10.76□□□□□ -0.69
TARDBP-222ENST00000620505 HMGCS2P54868 508 aa10.76□□□□□ -0.69
TARDBP-222ENST00000620505 TNNI3KQ59H18 835 aa10.76□□□□□ -0.69
TARDBP-222ENST00000620505 ZKSCAN2Q63HK3 967 aa10.76□□□□□ -0.69
TARDBP-222ENST00000620505 NAA16Q6N069 864 aaPredicted RBP10.76□□□□□ -0.69
TARDBP-222ENST00000620505 MAPKAPK5Q8IW41 473 aa10.76□□□□□ -0.69
TARDBP-222ENST00000620505 SLAIN1Q8ND83 568 aa10.76□□□□□ -0.69
TARDBP-222ENST00000620505 TGFBRAP1Q8WUH2 860 aa10.76□□□□□ -0.69
TARDBP-222ENST00000620505 NOL10Q9BSC4 688 aaKnown RBP10.76□□□□□ -0.69
TARDBP-222ENST00000620505 AGTPBP1Q9UPW5 1226 aa10.76□□□□□ -0.69
TARDBP-222ENST00000620505 FPGT-TNNI3KV9GXZ4 949 aa10.76□□□□□ -0.69
TARDBP-222ENST00000620505 PHIPQ8WWQ0 1821 aa10.75□□□□□ -0.69
TARDBP-222ENST00000620505 KIAA0100Q14667 2235 aaKnown RBP10.75□□□□□ -0.69
TARDBP-222ENST00000620505 INHAP05111 366 aa10.75□□□□□ -0.69
TARDBP-222ENST00000620505 GJB1P08034 283 aa10.75□□□□□ -0.69
TARDBP-222ENST00000620505 CAP2P40123 477 aa10.75□□□□□ -0.69
TARDBP-222ENST00000620505 ZAP70P43403 619 aa10.75□□□□□ -0.69
TARDBP-222ENST00000620505 GJA8P48165 433 aa10.75□□□□□ -0.69
TARDBP-222ENST00000620505 FXR1P51114 621 aaKnown RBP eCLIP10.75□□□□□ -0.69
TARDBP-222ENST00000620505 SHROOM1Q2M3G4 852 aaPredicted RBP10.75□□□□□ -0.69
TARDBP-222ENST00000620505 CCDC158Q5M9N0 1113 aa10.75□□□□□ -0.69
TARDBP-222ENST00000620505 ADGRA1Q86SQ6 560 aa10.75□□□□□ -0.69
TARDBP-222ENST00000620505 ZNF280CQ8ND82 737 aa10.75□□□□□ -0.69
TARDBP-222ENST00000620505 NKX2-3Q8TAU0 364 aa10.75□□□□□ -0.69
TARDBP-222ENST00000620505 U2AF1L4Q8WU68 220 aaKnown RBP10.75□□□□□ -0.69
TARDBP-222ENST00000620505 SAP30BPQ9UHR5 308 aaKnown RBP10.75□□□□□ -0.69
TARDBP-222ENST00000620505 SLC45A1Q9Y2W3 748 aa10.75□□□□□ -0.69
TARDBP-222ENST00000620505 MGAMO43451 1857 aa10.74□□□□□ -0.69
TARDBP-222ENST00000620505 USP17L5A8MUK1 530 aa10.74□□□□□ -0.69
TARDBP-222ENST00000620505 PEX10O60683 326 aa10.74□□□□□ -0.69
TARDBP-222ENST00000620505 GDF11O95390 407 aa10.74□□□□□ -0.69
TARDBP-222ENST00000620505 CYP2E1P05181 493 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-222ENST00000620505 DYNLL1P63167 89 aaKnown RBP10.74□□□□□ -0.69
TARDBP-222ENST00000620505 JAG1P78504 1218 aa10.74□□□□□ -0.69
TARDBP-222ENST00000620505 ATP8B2P98198 1209 aa10.74□□□□□ -0.69
TARDBP-222ENST00000620505 ITPRIPQ8IWB1 547 aa10.74□□□□□ -0.69
TARDBP-222ENST00000620505 DEFB118Q96PH6 123 aa10.74□□□□□ -0.69
TARDBP-222ENST00000620505 CCDC8Q9H0W5 538 aaPredicted RBP10.74□□□□□ -0.69
TARDBP-222ENST00000620505 PIH1D3Q9NQM4 214 aaKnown RBP10.74□□□□□ -0.69
TARDBP-222ENST00000620505 TLR7Q9NYK1 1049 aaKnown RBP10.74□□□□□ -0.69
TARDBP-222ENST00000620505 PNMA3Q9UL41 463 aa10.74□□□□□ -0.69
TARDBP-222ENST00000620505 FARP2O94887 1054 aaPredicted RBP10.73□□□□□ -0.69
TARDBP-222ENST00000620505 SGPL1O95470 568 aa10.73□□□□□ -0.69
TARDBP-222ENST00000620505 BAG3O95817 575 aa10.73□□□□□ -0.69
TARDBP-222ENST00000620505 TFRCP02786 760 aaKnown RBP10.73□□□□□ -0.69
TARDBP-222ENST00000620505 RLBP1P12271 317 aa10.73□□□□□ -0.69
TARDBP-222ENST00000620505 HNRNPUQ00839 825 aaKnown RBP eCLIP10.73□□□□□ -0.69
TARDBP-222ENST00000620505 MTMR2Q13614 643 aa10.73□□□□□ -0.69
TARDBP-222ENST00000620505 LCE2DQ5TA82 110 aaPredicted RBP10.73□□□□□ -0.69
TARDBP-222ENST00000620505 FTSJ3Q8IY81 847 aaKnown RBP10.73□□□□□ -0.69
TARDBP-222ENST00000620505 CRACR2BQ8N4Y2 399 aaPredicted RBP10.73□□□□□ -0.69
TARDBP-222ENST00000620505 PROCA1Q8NCQ7 364 aaPredicted RBP10.73□□□□□ -0.69
TARDBP-222ENST00000620505 SSH3Q8TE77 659 aa10.73□□□□□ -0.69
TARDBP-222ENST00000620505 COA7Q96BR5 231 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms