RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 FAM227BQ96M60 508 aa22.61■■□□□ 1.21
FGFR1-241ENST00000619564 SMC6Q96SB8 1091 aa22.61■■□□□ 1.21
FGFR1-241ENST00000619564 DDX39AO00148 427 aaKnown RBP22.61■■□□□ 1.21
FGFR1-241ENST00000619564 IRX3P78415 501 aaPredicted RBP22.61■■□□□ 1.21
FGFR1-241ENST00000619564 LIN9Q5TKA1 542 aa22.61■■□□□ 1.21
FGFR1-241ENST00000619564 KRT222Q8N1A0 295 aa22.61■■□□□ 1.21
FGFR1-241ENST00000619564 NOX5Q96PH1 765 aa22.61■■□□□ 1.21
FGFR1-241ENST00000619564 SPOPO43791 374 aa22.61■■□□□ 1.21
FGFR1-241ENST00000619564 USH1GQ495M9 461 aa22.61■■□□□ 1.21
FGFR1-241ENST00000619564 SNX29Q8TEQ0 813 aa22.61■■□□□ 1.21
FGFR1-241ENST00000619564 KIFC2Q96AC6 838 aa22.61■■□□□ 1.21
FGFR1-241ENST00000619564 IFT81Q8WYA0 676 aa22.61■■□□□ 1.21
FGFR1-241ENST00000619564 CUTAO60888 179 aa22.61■■□□□ 1.21
FGFR1-241ENST00000619564 DNM2P50570 870 aa22.61■■□□□ 1.21
FGFR1-241ENST00000619564 SNX14Q9Y5W7 946 aa22.61■■□□□ 1.21
FGFR1-241ENST00000619564 KRT9P35527 623 aa22.6■■□□□ 1.21
FGFR1-241ENST00000619564 NCOA5Q9HCD5 579 aaKnown RBP22.6■■□□□ 1.21
FGFR1-241ENST00000619564 DNM3Q9UQ16 869 aa22.6■■□□□ 1.21
FGFR1-241ENST00000619564 H7C1D1 291 aa22.6■■□□□ 1.21
FGFR1-241ENST00000619564 ZAP70P43403 619 aa22.6■■□□□ 1.21
FGFR1-241ENST00000619564 CCDC6Q16204 474 aa22.6■■□□□ 1.21
FGFR1-241ENST00000619564 MAST1Q9Y2H9 1570 aa22.6■■□□□ 1.21
FGFR1-241ENST00000619564 BAG1Q99933 345 aaPredicted RBP22.6■■□□□ 1.21
FGFR1-241ENST00000619564 ANKS4BQ8N8V4 417 aa22.6■■□□□ 1.21
FGFR1-241ENST00000619564 NAP1L3Q99457 506 aaPredicted RBP22.6■■□□□ 1.21
FGFR1-241ENST00000619564 RPS8P62241 208 aaKnown RBP22.59■■□□□ 1.21
FGFR1-241ENST00000619564 CSGALNACT2Q8N6G5 542 aa22.59■■□□□ 1.21
FGFR1-241ENST00000619564 CFBP00751 764 aa22.59■■□□□ 1.21
FGFR1-241ENST00000619564 ODF2LQ9ULJ1 636 aa22.59■■□□□ 1.21
FGFR1-241ENST00000619564 FLAD1Q8NFF5 587 aa22.59■■□□□ 1.21
FGFR1-241ENST00000619564 DDX17Q92841 729 aaKnown RBP22.59■■□□□ 1.21
FGFR1-241ENST00000619564 WDR70Q9NW82 654 aa22.59■■□□□ 1.21
FGFR1-241ENST00000619564 OTUD7AQ8TE49 926 aaPredicted RBP22.58■■□□□ 1.21
FGFR1-241ENST00000619564 ZKSCAN5Q9Y2L8 839 aa22.58■■□□□ 1.21
FGFR1-241ENST00000619564 M0QZ92 97 aa22.58■■□□□ 1.21
FGFR1-241ENST00000619564 SGSM2O43147 1006 aa22.58■■□□□ 1.21
FGFR1-241ENST00000619564 MAP7D1Q3KQU3 841 aa22.58■■□□□ 1.21
FGFR1-241ENST00000619564 DDX23Q9BUQ8 820 aaKnown RBP22.58■■□□□ 1.21
FGFR1-241ENST00000619564 FAM204AQ9H8W3 233 aa22.58■■□□□ 1.21
FGFR1-241ENST00000619564 SMIM23A6NLE4 172 aa22.58■■□□□ 1.21
FGFR1-241ENST00000619564 TNFAIP1Q13829 316 aa22.58■■□□□ 1.21
FGFR1-241ENST00000619564 CCDC26Q8TAB7 109 aa22.58■■□□□ 1.21
FGFR1-241ENST00000619564 VPS16Q9H269 839 aa22.58■■□□□ 1.21
FGFR1-241ENST00000619564 EIF4A1P60842 406 aaKnown RBP22.58■■□□□ 1.2
FGFR1-241ENST00000619564 ARPP21Q9UBL0 812 aaPredicted RBP22.58■■□□□ 1.2
FGFR1-241ENST00000619564 CALCRLQ16602 461 aa22.58■■□□□ 1.2
FGFR1-241ENST00000619564 IGSF22Q8N9C0 903 aa22.58■■□□□ 1.2
FGFR1-241ENST00000619564 TFAP4Q01664 338 aa22.57■■□□□ 1.2
FGFR1-241ENST00000619564 ASIC2Q16515 512 aa22.57■■□□□ 1.2
FGFR1-241ENST00000619564 MAEAQ7L5Y9 396 aa22.57■■□□□ 1.2
FGFR1-241ENST00000619564 USP40Q9NVE5 1235 aa22.57■■□□□ 1.2
FGFR1-241ENST00000619564 POLR2DO15514 142 aaKnown RBP22.57■■□□□ 1.2
FGFR1-241ENST00000619564 ERCC5P28715 1186 aaPredicted RBP22.57■■□□□ 1.2
FGFR1-241ENST00000619564 TEKT1Q969V4 418 aa22.57■■□□□ 1.2
FGFR1-241ENST00000619564 E7EVH7 732 aa22.57■■□□□ 1.2
FGFR1-241ENST00000619564 SMCR8Q8TEV9 937 aaPredicted RBP22.57■■□□□ 1.2
FGFR1-241ENST00000619564 TLDC2A0PJX2 215 aa22.57■■□□□ 1.2
FGFR1-241ENST00000619564 ALDH3A1P30838 453 aa22.57■■□□□ 1.2
FGFR1-241ENST00000619564 ATP7AQ04656 1500 aa22.57■■□□□ 1.2
FGFR1-241ENST00000619564 NPC1L1Q9UHC9 1359 aa22.57■■□□□ 1.2
FGFR1-241ENST00000619564 ARID4AP29374 1257 aaPredicted RBP22.56■■□□□ 1.2
FGFR1-241ENST00000619564 CTSWP56202 376 aa22.56■■□□□ 1.2
FGFR1-241ENST00000619564 PAK1Q13153 545 aa22.56■■□□□ 1.2
FGFR1-241ENST00000619564 HERC4Q5GLZ8 1057 aaPredicted RBP22.56■■□□□ 1.2
FGFR1-241ENST00000619564 AS3MTQ9HBK9 375 aa22.56■■□□□ 1.2
FGFR1-241ENST00000619564 SYNRGQ9UMZ2 1314 aa22.56■■□□□ 1.2
FGFR1-241ENST00000619564 TUBBP07437 444 aa22.56■■□□□ 1.2
FGFR1-241ENST00000619564 GTF2IP78347 998 aa22.56■■□□□ 1.2
FGFR1-241ENST00000619564 SPATA24Q86W54 205 aa22.56■■□□□ 1.2
FGFR1-241ENST00000619564 GPR161Q8N6U8 529 aaKnown RBP22.56■■□□□ 1.2
FGFR1-241ENST00000619564 MYL10Q9BUA6 226 aa22.56■■□□□ 1.2
FGFR1-241ENST00000619564 RASA3Q14644 834 aa22.56■■□□□ 1.2
FGFR1-241ENST00000619564 PSMC4P43686 418 aa22.56■■□□□ 1.2
FGFR1-241ENST00000619564 SYT10Q6XYQ8 523 aa22.56■■□□□ 1.2
FGFR1-241ENST00000619564 MYCT1Q8N699 235 aa22.56■■□□□ 1.2
FGFR1-241ENST00000619564 TTF2Q9UNY4 1162 aaKnown RBP22.56■■□□□ 1.2
FGFR1-241ENST00000619564 CSADQ9Y600 493 aa22.56■■□□□ 1.2
FGFR1-241ENST00000619564 DAPK3O43293 454 aa22.55■■□□□ 1.2
FGFR1-241ENST00000619564 TRERF1Q96PN7 1200 aa22.55■■□□□ 1.2
FGFR1-241ENST00000619564 MFSD14BQ5SR56 506 aa22.55■■□□□ 1.2
FGFR1-241ENST00000619564 ARFGAP2Q8N6H7 521 aa22.55■■□□□ 1.2
FGFR1-241ENST00000619564 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.55■■□□□ 1.2
FGFR1-241ENST00000619564 EAPPQ56P03 285 aaPredicted RBP22.55■■□□□ 1.2
FGFR1-241ENST00000619564 CHURC1Q8WUH1 139 aa22.55■■□□□ 1.2
FGFR1-241ENST00000619564 PNMA6EA0A0J9YXQ4 647 aa22.55■■□□□ 1.2
FGFR1-241ENST00000619564 CEP128Q6ZU80 1094 aa22.55■■□□□ 1.2
FGFR1-241ENST00000619564 KCNK9Q9NPC2 374 aa22.55■■□□□ 1.2
FGFR1-241ENST00000619564 TRIM35Q9UPQ4 493 aa22.55■■□□□ 1.2
FGFR1-241ENST00000619564 MAPK8IP1Q9UQF2 711 aa22.55■■□□□ 1.2
FGFR1-241ENST00000619564 PROCA1Q8NCQ7 364 aaPredicted RBP22.54■■□□□ 1.2
FGFR1-241ENST00000619564 RHOXF2BP0C7M4 288 aa22.54■■□□□ 1.2
FGFR1-241ENST00000619564 XRCC6P12956 609 aaKnown RBP eCLIP22.54■■□□□ 1.2
FGFR1-241ENST00000619564 CFAP157Q5JU67 520 aa22.54■■□□□ 1.2
FGFR1-241ENST00000619564 FNBP4Q8N3X1 1017 aaPredicted RBP22.54■■□□□ 1.2
FGFR1-241ENST00000619564 RHOXF2Q9BQY4 288 aa22.54■■□□□ 1.2
FGFR1-241ENST00000619564 NEURL1BA8MQ27 555 aa22.54■■□□□ 1.2
FGFR1-241ENST00000619564 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.54■■□□□ 1.2
FGFR1-241ENST00000619564 PER1O15534 1290 aaPredicted RBP22.54■■□□□ 1.2
FGFR1-241ENST00000619564 MLKLQ8NB16 471 aa22.54■■□□□ 1.2
FGFR1-241ENST00000619564 SLC5A4Q9NY91 659 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms