RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 ZBED9Q6R2W3 1325 aa14.59□□□□□ -0.07
UPF3B-204ENST00000619445 MYPNQ86TC9 1320 aa14.59□□□□□ -0.07
UPF3B-204ENST00000619445 EN2P19622 333 aaPredicted RBP14.59□□□□□ -0.07
UPF3B-204ENST00000619445 OSBPP22059 807 aa14.59□□□□□ -0.07
UPF3B-204ENST00000619445 PPP4CP60510 307 aa14.59□□□□□ -0.07
UPF3B-204ENST00000619445 UBXN2AP68543 259 aa14.59□□□□□ -0.07
UPF3B-204ENST00000619445 HSP90AB4PQ58FF6 505 aa14.59□□□□□ -0.07
UPF3B-204ENST00000619445 DIEXFQ68CQ4 756 aaKnown RBP14.59□□□□□ -0.07
UPF3B-204ENST00000619445 PI16Q6UXB8 463 aa14.59□□□□□ -0.07
UPF3B-204ENST00000619445 TBC1D9Q6ZT07 1266 aa14.59□□□□□ -0.07
UPF3B-204ENST00000619445 AS3MTQ9HBK9 375 aa14.59□□□□□ -0.07
UPF3B-204ENST00000619445 AGTPBP1Q9UPW5 1226 aa14.59□□□□□ -0.07
UPF3B-204ENST00000619445 TNNQ9UQP3 1299 aa14.59□□□□□ -0.07
UPF3B-204ENST00000619445 TRIM75PA6NK02 468 aa14.58□□□□□ -0.08
UPF3B-204ENST00000619445 ZBTB7BO15156 539 aaPredicted RBP14.58□□□□□ -0.08
UPF3B-204ENST00000619445 GRK4P32298 578 aa14.58□□□□□ -0.08
UPF3B-204ENST00000619445 ZNF280CQ8ND82 737 aa14.58□□□□□ -0.08
UPF3B-204ENST00000619445 SLAIN1Q8ND83 568 aa14.58□□□□□ -0.08
UPF3B-204ENST00000619445 TRIM34Q9BYJ4 488 aa14.58□□□□□ -0.08
UPF3B-204ENST00000619445 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.58□□□□□ -0.08
UPF3B-204ENST00000619445 ATAD5Q96QE3 1844 aa14.57□□□□□ -0.08
UPF3B-204ENST00000619445 USP17L5A8MUK1 530 aa14.57□□□□□ -0.08
UPF3B-204ENST00000619445 ASNSP08243 561 aa14.57□□□□□ -0.08
UPF3B-204ENST00000619445 CYP2C8P10632 490 aa14.57□□□□□ -0.08
UPF3B-204ENST00000619445 CAP2P40123 477 aa14.57□□□□□ -0.08
UPF3B-204ENST00000619445 GCLCP48506 637 aaPredicted RBP14.57□□□□□ -0.08
UPF3B-204ENST00000619445 FOXP4Q8IVH2 680 aaPredicted RBP14.57□□□□□ -0.08
UPF3B-204ENST00000619445 SH3TC2Q8TF17 1288 aa14.57□□□□□ -0.08
UPF3B-204ENST00000619445 DBNDD2Q9BQY9 259 aa14.57□□□□□ -0.08
UPF3B-204ENST00000619445 CHMP4BQ9H444 224 aaKnown RBP14.57□□□□□ -0.08
UPF3B-204ENST00000619445 ZSWIM8A7E2V4 1837 aa14.56□□□□□ -0.08
UPF3B-204ENST00000619445 MIER1Q8N108 512 aa14.56□□□□□ -0.08
UPF3B-204ENST00000619445 FOCADQ5VW36 1801 aa14.56□□□□□ -0.08
UPF3B-204ENST00000619445 CYP2E1P05181 493 aaPredicted RBP14.55□□□□□ -0.08
UPF3B-204ENST00000619445 HLA-DOAP06340 250 aa14.55□□□□□ -0.08
UPF3B-204ENST00000619445 IRF5Q13568 498 aa14.55□□□□□ -0.08
UPF3B-204ENST00000619445 FAM110CQ1W6H9 321 aa14.55□□□□□ -0.08
UPF3B-204ENST00000619445 PXYLP1Q8TE99 480 aa14.55□□□□□ -0.08
UPF3B-204ENST00000619445 SH3RF3Q8TEJ3 882 aaPredicted RBP14.55□□□□□ -0.08
UPF3B-204ENST00000619445 COA7Q96BR5 231 aa14.55□□□□□ -0.08
UPF3B-204ENST00000619445 WDR18Q9BV38 432 aa14.55□□□□□ -0.08
UPF3B-204ENST00000619445 SNRKQ9NRH2 765 aa14.55□□□□□ -0.08
UPF3B-204ENST00000619445 AATFQ9NY61 560 aaKnown RBP eCLIP14.55□□□□□ -0.08
UPF3B-204ENST00000619445 BIN2Q9UBW5 565 aaPredicted RBP14.55□□□□□ -0.08
UPF3B-204ENST00000619445 LOC285556D6RIA3 1793 aa14.55□□□□□ -0.08
UPF3B-204ENST00000619445 TNPO2O14787 897 aaKnown RBP14.54□□□□□ -0.08
UPF3B-204ENST00000619445 GJB1P08034 283 aa14.54□□□□□ -0.08
UPF3B-204ENST00000619445 SPP2Q13103 211 aa14.54□□□□□ -0.08
UPF3B-204ENST00000619445 SH3D19Q5HYK7 790 aa14.54□□□□□ -0.08
UPF3B-204ENST00000619445 METTL16Q86W50 562 aaKnown RBP14.54□□□□□ -0.08
UPF3B-204ENST00000619445 CRACR2BQ8N4Y2 399 aaPredicted RBP14.54□□□□□ -0.08
UPF3B-204ENST00000619445 C1orf115Q9H7X2 142 aa14.54□□□□□ -0.08
UPF3B-204ENST00000619445 DBNLQ9UJU6 430 aaKnown RBP14.54□□□□□ -0.08
UPF3B-204ENST00000619445 FLT1P17948 1338 aa14.54□□□□□ -0.08
UPF3B-204ENST00000619445 CDK5RAP2Q96SN8 1893 aa14.53□□□□□ -0.08
UPF3B-204ENST00000619445 C19orf81C9J6K1 198 aa14.53□□□□□ -0.08
UPF3B-204ENST00000619445 HMMRO75330 724 aa14.53□□□□□ -0.08
UPF3B-204ENST00000619445 RLBP1P12271 317 aa14.53□□□□□ -0.08
UPF3B-204ENST00000619445 CTGFP29279 349 aa14.53□□□□□ -0.08
UPF3B-204ENST00000619445 ZAP70P43403 619 aa14.53□□□□□ -0.08
UPF3B-204ENST00000619445 PRKCZQ05513 592 aa14.53□□□□□ -0.08
UPF3B-204ENST00000619445 MAP3K12Q12852 859 aa14.53□□□□□ -0.08
UPF3B-204ENST00000619445 CEP85Q6P2H3 762 aa14.53□□□□□ -0.08
UPF3B-204ENST00000619445 TGFBRAP1Q8WUH2 860 aa14.53□□□□□ -0.08
UPF3B-204ENST00000619445 TMOD4Q9NZQ9 345 aa14.53□□□□□ -0.08
UPF3B-204ENST00000619445 MKI67P46013 3256 aaKnown RBP14.53□□□□□ -0.08
UPF3B-204ENST00000619445 ADCY3O60266 1144 aa14.52□□□□□ -0.08
UPF3B-204ENST00000619445 IDH1O75874 414 aaKnown RBP14.52□□□□□ -0.08
UPF3B-204ENST00000619445 GJA8P48165 433 aa14.52□□□□□ -0.08
UPF3B-204ENST00000619445 HMGCS2P54868 508 aa14.52□□□□□ -0.08
UPF3B-204ENST00000619445 TTF1Q15361 905 aaPredicted RBP14.52□□□□□ -0.08
UPF3B-204ENST00000619445 GTF3C2Q8WUA4 911 aaPredicted RBP14.52□□□□□ -0.08
UPF3B-204ENST00000619445 EAF2Q96CJ1 260 aaPredicted RBP14.52□□□□□ -0.08
UPF3B-204ENST00000619445 RNF208Q9H0X6 261 aa14.52□□□□□ -0.08
UPF3B-204ENST00000619445 MYO5AQ9Y4I1 1855 aaKnown RBP14.52□□□□□ -0.09
UPF3B-204ENST00000619445 FAM196BA6NMK8 535 aa14.51□□□□□ -0.09
UPF3B-204ENST00000619445 MYCP01106 439 aaPredicted RBP14.51□□□□□ -0.09
UPF3B-204ENST00000619445 CCL5P13501 91 aa14.51□□□□□ -0.09
UPF3B-204ENST00000619445 CYP7A1P22680 504 aa14.51□□□□□ -0.09
UPF3B-204ENST00000619445 FLT3LGP49771 235 aa14.51□□□□□ -0.09
UPF3B-204ENST00000619445 BACE1P56817 501 aa14.51□□□□□ -0.09
UPF3B-204ENST00000619445 MAPKAPK5Q8IW41 473 aa14.51□□□□□ -0.09
UPF3B-204ENST00000619445 RPAP2Q8IXW5 612 aaPredicted RBP14.51□□□□□ -0.09
UPF3B-204ENST00000619445 ANKRD13CQ8N6S4 541 aa14.51□□□□□ -0.09
UPF3B-204ENST00000619445 HTATIP2Q9BUP3 242 aa14.51□□□□□ -0.09
UPF3B-204ENST00000619445 CCDC8Q9H0W5 538 aaPredicted RBP14.51□□□□□ -0.09
UPF3B-204ENST00000619445 DDX19BQ9UMR2 479 aa14.51□□□□□ -0.09
UPF3B-204ENST00000619445 BRCA2P51587 3418 aa14.51□□□□□ -0.09
UPF3B-204ENST00000619445 DOCK3Q8IZD9 2030 aa14.51□□□□□ -0.09
UPF3B-204ENST00000619445 MYH1P12882 1939 aa14.51□□□□□ -0.09
UPF3B-204ENST00000619445 ECM2O94769 699 aaPredicted RBP14.5□□□□□ -0.09
UPF3B-204ENST00000619445 HOXA7P31268 230 aaPredicted RBP14.5□□□□□ -0.09
UPF3B-204ENST00000619445 IRX3P78415 501 aaPredicted RBP14.5□□□□□ -0.09
UPF3B-204ENST00000619445 MTFR1Q15390 333 aa14.5□□□□□ -0.09
UPF3B-204ENST00000619445 TREML2Q5T2D2 321 aa14.5□□□□□ -0.09
UPF3B-204ENST00000619445 TTC6Q86TZ1 520 aa14.5□□□□□ -0.09
UPF3B-204ENST00000619445 AACSQ86V21 672 aa14.5□□□□□ -0.09
UPF3B-204ENST00000619445 CLASRPQ8N2M8 674 aaKnown RBP14.5□□□□□ -0.09
UPF3B-204ENST00000619445 PIH1D3Q9NQM4 214 aaKnown RBP14.5□□□□□ -0.09
UPF3B-204ENST00000619445 TAOK2Q9UL54 1235 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms