RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 TCIRG1Q13488 830 aa15.63■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CAGE1Q8TC20 777 aa15.63■□□□□ 0.09
CNTNAP3B-215ENST00000619138 MRPL44Q9H9J2 332 aaKnown RBP15.63■□□□□ 0.09
CNTNAP3B-215ENST00000619138 PALLDQ8WX93 1383 aa15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 A0A1B0GUL7 405 aa15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CCDC57Q2TAC2 916 aa15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CCDC175P0C221 793 aa15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 MATR3P43243 847 aaKnown RBP eCLIP15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 SMARCC1Q92922 1105 aaPredicted RBP15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 KAZALD1Q96I82 304 aa15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 TRPC5Q9UL62 973 aaPredicted RBP15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 JRKLQ9Y4A0 524 aa15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 ENC1O14682 589 aa15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 TXLNAP40222 546 aa15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 NCAPHQ15003 741 aa15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 HDXQ7Z353 690 aa15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 IL17RAQ96F46 866 aa15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 FAM204AQ9H8W3 233 aa15.62■□□□□ 0.09
CNTNAP3B-215ENST00000619138 EIF3CLB5ME19 914 aaKnown RBP15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 PDE4BQ07343 736 aa15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 ITPK1Q13572 414 aa15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 GSPT2Q8IYD1 628 aaKnown RBP15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 SMYD4Q8IYR2 804 aaPredicted RBP15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CMTR1Q8N1G2 835 aaKnown RBP15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 EIF3CQ99613 913 aaKnown RBP15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 GUCA1BQ9UMX6 200 aa15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 BCL9O00512 1426 aa15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 TNS2Q63HR2 1409 aa15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 UBE2Q2LH0YL09 131 aa15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 LRP10Q7Z4F1 713 aa15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 ACRBPQ8NEB7 543 aa15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 FDPSP14324 419 aaKnown RBP15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 VSTM4Q8IW00 320 aa15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 PNKPQ96T60 521 aa15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 PAG1Q9NWQ8 432 aa15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 RTEL1Q9NZ71 1219 aa15.61■□□□□ 0.09
CNTNAP3B-215ENST00000619138 HMGB1P09429 215 aaKnown RBP15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 DNA2P51530 1060 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 NCAPH2Q6IBW4 605 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 MAPK8IP1Q9UQF2 711 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 MROH7-TTC4A0A0A0MT08 1334 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 POLR2DO15514 142 aaKnown RBP15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 FNBP4Q8N3X1 1017 aaPredicted RBP15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 EEF2KMTQ96G04 330 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CCNL1Q9UK58 526 aaPredicted RBP15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 MAP3K15Q6ZN16 1313 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CTAGE15A4D2H0 777 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CTAGE8P0CG41 777 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 HSPD1P10809 573 aaKnown RBP15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CTAGE6Q86UF2 777 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CTAGE4Q8IX94 777 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 SLC35F6Q8N357 371 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CCDC24Q8N4L8 307 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 SMARCC2Q8TAQ2 1214 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 RABGGTAQ92696 567 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 FAM53CQ9NYF3 392 aa15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 NIP7Q9Y221 180 aaKnown RBP eCLIP15.6■□□□□ 0.09
CNTNAP3B-215ENST00000619138 ICE2Q659A1 982 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 JMYQ8N9B5 988 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 KCNB2Q92953 911 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 LLPHQ9BRT6 129 aaKnown RBP15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 FAM107BQ9H098 131 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 KCNH3Q9ULD8 1083 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 DENND2AQ9ULE3 1009 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 DISP2A7MBM2 1401 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CACNA1FO60840 1977 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CDC27P30260 824 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 VPS37DQ86XT2 251 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 EXOC4Q96A65 974 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 SLC26A6Q9BXS9 759 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 MRFAP1Q9Y605 127 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 COL15A1P39059 1388 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 TEX33O43247 280 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 IVLP07476 585 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 VSNL1P62760 191 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 IMMTQ16891 758 aaKnown RBP15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 SPECC1LQ69YQ0 1117 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CPLX2Q6PUV4 134 aaKnown RBP15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 PACS2Q86VP3 889 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 IGSF22Q8N9C0 903 aa15.59■□□□□ 0.09
CNTNAP3B-215ENST00000619138 GNPATO15228 680 aa15.58■□□□□ 0.09
CNTNAP3B-215ENST00000619138 CTR9Q6PD62 1173 aa15.58■□□□□ 0.09
CNTNAP3B-215ENST00000619138 NUP133Q8WUM0 1156 aa15.58■□□□□ 0.09
CNTNAP3B-215ENST00000619138 NUP88Q99567 741 aaPredicted RBP15.58■□□□□ 0.09
CNTNAP3B-215ENST00000619138 SLF1Q9BQI6 1058 aa15.58■□□□□ 0.09
CNTNAP3B-215ENST00000619138 PXDNLA1KZ92 1463 aa15.58■□□□□ 0.09
CNTNAP3B-215ENST00000619138 PKD1L3Q7Z443 1732 aa15.58■□□□□ 0.08
CNTNAP3B-215ENST00000619138 GIGYF2Q6Y7W6 1299 aaKnown RBP15.58■□□□□ 0.08
CNTNAP3B-215ENST00000619138 MTMR7Q9Y216 660 aa15.58■□□□□ 0.08
CNTNAP3B-215ENST00000619138 CTAGE9A4FU28 777 aa15.58■□□□□ 0.08
CNTNAP3B-215ENST00000619138 CNNM1Q9NRU3 951 aa15.58■□□□□ 0.08
CNTNAP3B-215ENST00000619138 KCNJ14Q9UNX9 436 aa15.58■□□□□ 0.08
CNTNAP3B-215ENST00000619138 TFR2Q9UP52 801 aa15.58■□□□□ 0.08
CNTNAP3B-215ENST00000619138 IRS4O14654 1257 aaPredicted RBP15.57■□□□□ 0.08
CNTNAP3B-215ENST00000619138 MAP3K9P80192 1104 aa15.57■□□□□ 0.08
CNTNAP3B-215ENST00000619138 PCMTD1Q96MG8 357 aaPredicted RBP15.57■□□□□ 0.08
CNTNAP3B-215ENST00000619138 CRACR2AQ9BSW2 395 aa15.57■□□□□ 0.08
CNTNAP3B-215ENST00000619138 SERTAD1Q9UHV2 236 aa15.57■□□□□ 0.08
CNTNAP3B-215ENST00000619138 BCL9LQ86UU0 1499 aa15.57■□□□□ 0.08
CNTNAP3B-215ENST00000619138 IFIT5Q13325 482 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms