RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 MARF1Q9Y4F3 1742 aaKnown RBP17.15■□□□□ 0.34
SRRT-217ENST00000618411 COG1Q8WTW3 980 aa17.14■□□□□ 0.34
SRRT-217ENST00000618411 IP6K1Q92551 441 aa17.14■□□□□ 0.34
SRRT-217ENST00000618411 CXorf56Q9H5V9 222 aa17.14■□□□□ 0.34
SRRT-217ENST00000618411 ZC3H4Q9UPT8 1303 aaKnown RBP17.14■□□□□ 0.33
SRRT-217ENST00000618411 USP54Q70EL1 1684 aa17.14■□□□□ 0.33
SRRT-217ENST00000618411 CPLX3Q8WVH0 158 aa17.14■□□□□ 0.33
SRRT-217ENST00000618411 WWC3Q9ULE0 1092 aa17.14■□□□□ 0.33
SRRT-217ENST00000618411 CDKL5O76039 1030 aa17.14■□□□□ 0.33
SRRT-217ENST00000618411 STIM1Q13586 685 aa17.14■□□□□ 0.33
SRRT-217ENST00000618411 SLC9C2Q5TAH2 1124 aa17.14■□□□□ 0.33
SRRT-217ENST00000618411 KAT2BQ92831 832 aa17.14■□□□□ 0.33
SRRT-217ENST00000618411 CTAGE1Q96RT6 745 aa17.14■□□□□ 0.33
SRRT-217ENST00000618411 ADD3Q9UEY8 706 aaKnown RBP17.14■□□□□ 0.33
SRRT-217ENST00000618411 AMOTQ4VCS5 1084 aa17.13■□□□□ 0.33
SRRT-217ENST00000618411 KANK3Q6NY19 840 aa17.13■□□□□ 0.33
SRRT-217ENST00000618411 RPAINQ86UA6 219 aa17.13■□□□□ 0.33
SRRT-217ENST00000618411 NCOA7Q8NI08 942 aa17.13■□□□□ 0.33
SRRT-217ENST00000618411 AIFM3Q96NN9 605 aa17.13■□□□□ 0.33
SRRT-217ENST00000618411 MYD88Q99836 296 aa17.13■□□□□ 0.33
SRRT-217ENST00000618411 FAM169AQ9Y6X4 670 aa17.13■□□□□ 0.33
SRRT-217ENST00000618411 HNRNPH1P31943 449 aaKnown RBP17.13■□□□□ 0.33
SRRT-217ENST00000618411 ARHGAP25P42331 645 aa17.13■□□□□ 0.33
SRRT-217ENST00000618411 ANTXR2P58335 489 aa17.13■□□□□ 0.33
SRRT-217ENST00000618411 ANKRD20A12PQ8NF67 263 aa17.13■□□□□ 0.33
SRRT-217ENST00000618411 DNAJC5Q9H3Z4 198 aa17.13■□□□□ 0.33
SRRT-217ENST00000618411 CCDC196A0A1B0GTZ2 297 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 TARSL2A2RTX5 802 aaKnown RBP17.12■□□□□ 0.33
SRRT-217ENST00000618411 CCDC172P0C7W6 258 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 MAP2K2P36507 400 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 C1orf141Q5JVX7 400 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 SPATA1Q5VX52 437 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 POTEDQ86YR6 584 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 RAB11FIP4Q86YS3 637 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 ABTB2Q8N961 1025 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 FAM76AQ8TAV0 307 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 GPR108Q9NPR9 543 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 ZMYM6O95789 1325 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 M0R2C6 588 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 CASP14P31944 242 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 LIG3P49916 1009 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 IRAK1P51617 712 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 AKAP17AQ02040 695 aaKnown RBP17.12■□□□□ 0.33
SRRT-217ENST00000618411 ZNF827Q17R98 1081 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 FILIP1LQ4L180 1135 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 RALYLQ86SE5 291 aaKnown RBP17.12■□□□□ 0.33
SRRT-217ENST00000618411 ACRBPQ8NEB7 543 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 SPATA20Q8TB22 786 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 ITIH6Q6UXX5 1313 aa17.12■□□□□ 0.33
SRRT-217ENST00000618411 RGPD8O14715 1765 aaPredicted RBP17.12■□□□□ 0.33
SRRT-217ENST00000618411 CLGNO14967 610 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 SEMA3EO15041 775 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 KDM6AO15550 1401 aaPredicted RBP17.11■□□□□ 0.33
SRRT-217ENST00000618411 C4AP0C0L4 1744 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 C4BP0C0L5 1744 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 PRR29P0C7W0 189 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 CCT5P48643 541 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 MNAT1P51948 309 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 HAND2P61296 217 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 NCAPH2Q6IBW4 605 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 CPLX2Q6PUV4 134 aaKnown RBP17.11■□□□□ 0.33
SRRT-217ENST00000618411 NEUROD6Q96NK8 337 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 CRACR2AQ9BSW2 395 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 ATP6V1AP38606 617 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 TRDNQ13061 729 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 RPGRIP1Q96KN7 1286 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 SERTAD1Q9UHV2 236 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 CCDC9Q9Y3X0 531 aaKnown RBP17.11■□□□□ 0.33
SRRT-217ENST00000618411 CPDO75976 1380 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 POLR2DO15514 142 aaKnown RBP17.11■□□□□ 0.33
SRRT-217ENST00000618411 ABL1P00519 1130 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 TRAPPC11Q7Z392 1133 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 OSBP2Q969R2 916 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 KAT14Q9H8E8 782 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 CEP83Q9Y592 693 aa17.11■□□□□ 0.33
SRRT-217ENST00000618411 DDX60Q8IY21 1712 aaKnown RBP17.1■□□□□ 0.33
SRRT-217ENST00000618411 GYPCP04921 128 aa17.1■□□□□ 0.33
SRRT-217ENST00000618411 GGCXP38435 758 aa17.1■□□□□ 0.33
SRRT-217ENST00000618411 PPFIA1Q13136 1202 aa17.1■□□□□ 0.33
SRRT-217ENST00000618411 TRIM29Q14134 588 aa17.1■□□□□ 0.33
SRRT-217ENST00000618411 DONSONQ9NYP3 566 aa17.1■□□□□ 0.33
SRRT-217ENST00000618411 FGAP02671 866 aa17.1■□□□□ 0.33
SRRT-217ENST00000618411 PTPREP23469 700 aa17.1■□□□□ 0.33
SRRT-217ENST00000618411 FXR1P51114 621 aaKnown RBP eCLIP17.1■□□□□ 0.33
SRRT-217ENST00000618411 NBPF14Q5TI25 921 aa17.1■□□□□ 0.33
SRRT-217ENST00000618411 CDKAL1Q5VV42 579 aa17.1■□□□□ 0.33
SRRT-217ENST00000618411 CYP26C1Q6V0L0 522 aa17.1■□□□□ 0.33
SRRT-217ENST00000618411 STK11IPQ8N1F8 1099 aa17.1■□□□□ 0.33
SRRT-217ENST00000618411 XAGE3Q8WTP9 111 aa17.1■□□□□ 0.33
SRRT-217ENST00000618411 FOXP2O15409 715 aa17.09■□□□□ 0.33
SRRT-217ENST00000618411 IFIT1P09914 478 aaKnown RBP17.09■□□□□ 0.33
SRRT-217ENST00000618411 SKIDA1Q1XH10 827 aa17.09■□□□□ 0.33
SRRT-217ENST00000618411 SPECC1Q5M775 1068 aa17.09■□□□□ 0.33
SRRT-217ENST00000618411 GBP6Q6ZN66 633 aa17.09■□□□□ 0.33
SRRT-217ENST00000618411 UBE3BQ7Z3V4 1068 aa17.09■□□□□ 0.33
SRRT-217ENST00000618411 WDR17Q8IZU2 1322 aa17.09■□□□□ 0.33
SRRT-217ENST00000618411 SPEF2Q9C093 1822 aa17.09■□□□□ 0.33
SRRT-217ENST00000618411 NWD2Q9ULI1 1742 aa17.09■□□□□ 0.33
SRRT-217ENST00000618411 GOLGA6CA6NDK9 693 aa17.09■□□□□ 0.33
SRRT-217ENST00000618411 GOLGA6DP0CG33 693 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms