RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 BRAPQ7Z569 592 aa14.38□□□□□ -0.11
CIITA-212ENST00000618207 CLIC6Q96NY7 704 aa14.38□□□□□ -0.11
CIITA-212ENST00000618207 TRIM5Q9C035 493 aa14.38□□□□□ -0.11
CIITA-212ENST00000618207 NR5A1Q13285 461 aa14.37□□□□□ -0.11
CIITA-212ENST00000618207 HS1BP3Q53T59 392 aa14.37□□□□□ -0.11
CIITA-212ENST00000618207 ADALQ6DHV7 355 aa14.37□□□□□ -0.11
CIITA-212ENST00000618207 FANCBQ8NB91 859 aa14.37□□□□□ -0.11
CIITA-212ENST00000618207 ENGASEQ8NFI3 743 aa14.37□□□□□ -0.11
CIITA-212ENST00000618207 PRR5LQ6MZQ0 368 aa14.37□□□□□ -0.11
CIITA-212ENST00000618207 TRIM22Q8IYM9 498 aa14.37□□□□□ -0.11
CIITA-212ENST00000618207 ENAHQ8N8S7 591 aaPredicted RBP14.37□□□□□ -0.11
CIITA-212ENST00000618207 RPGRQ92834 1020 aaKnown RBP14.37□□□□□ -0.11
CIITA-212ENST00000618207 CACNA1SQ13698 1873 aa14.37□□□□□ -0.11
CIITA-212ENST00000618207 USP17L8P0C7I0 530 aa14.37□□□□□ -0.11
CIITA-212ENST00000618207 IFIT1BQ5T764 474 aaKnown RBP14.37□□□□□ -0.11
CIITA-212ENST00000618207 KCNG4Q8TDN1 519 aa14.37□□□□□ -0.11
CIITA-212ENST00000618207 POLR3EQ9NVU0 708 aa14.37□□□□□ -0.11
CIITA-212ENST00000618207 MCM9Q9NXL9 1143 aa14.37□□□□□ -0.11
CIITA-212ENST00000618207 ATL3Q6DD88 541 aa14.36□□□□□ -0.11
CIITA-212ENST00000618207 FMR1NBQ8N0W7 255 aaPredicted RBP14.36□□□□□ -0.11
CIITA-212ENST00000618207 DCP1AQ9NPI6 582 aaPredicted RBP14.36□□□□□ -0.11
CIITA-212ENST00000618207 TRPC5Q9UL62 973 aaPredicted RBP14.36□□□□□ -0.11
CIITA-212ENST00000618207 SCN7AQ01118 1682 aa14.36□□□□□ -0.11
CIITA-212ENST00000618207 IFNAR1P17181 557 aa14.36□□□□□ -0.11
CIITA-212ENST00000618207 RBM43Q6ZSC3 357 aaKnown RBP14.36□□□□□ -0.11
CIITA-212ENST00000618207 DIS3L2Q8IYB7 885 aaKnown RBP14.36□□□□□ -0.11
CIITA-212ENST00000618207 ZSCAN10Q96SZ4 725 aaPredicted RBP14.36□□□□□ -0.11
CIITA-212ENST00000618207 MROH7-TTC4A0A0A0MT08 1334 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 PLEKHA8P1O95397 391 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 FMNL1O95466 1100 aaPredicted RBP14.35□□□□□ -0.11
CIITA-212ENST00000618207 GRAPQ13588 217 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 IQCA1Q86XH1 822 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 GRAPLQ8TC17 118 aaPredicted RBP14.35□□□□□ -0.11
CIITA-212ENST00000618207 OXER1Q8TDS5 423 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.35□□□□□ -0.11
CIITA-212ENST00000618207 CRNKL1Q9BZJ0 848 aaKnown RBP14.35□□□□□ -0.11
CIITA-212ENST00000618207 VPS54Q9P1Q0 977 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 R3HCC1Q9Y3T6 440 aaKnown RBP14.35□□□□□ -0.11
CIITA-212ENST00000618207 A0A1B0GUL6 1792 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 BECN2A8MW95 431 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 GOLGA6L19H0YKK7 550 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 ZNF202O95125 648 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 YEATS4O95619 227 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 SERPINB2P05120 415 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 PFKFB1P16118 471 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 USP5P45974 858 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 DNTTIP2Q5QJE6 756 aaKnown RBP14.35□□□□□ -0.11
CIITA-212ENST00000618207 DYNLL2Q96FJ2 89 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 NRBP1Q9UHY1 535 aa14.35□□□□□ -0.11
CIITA-212ENST00000618207 UFL1O94874 794 aa14.34□□□□□ -0.11
CIITA-212ENST00000618207 GYS1P13807 737 aa14.34□□□□□ -0.11
CIITA-212ENST00000618207 AKAP17AQ02040 695 aaKnown RBP14.34□□□□□ -0.11
CIITA-212ENST00000618207 ZRSR1Q15695 479 aaKnown RBP14.34□□□□□ -0.11
CIITA-212ENST00000618207 CRACR2BQ8N4Y2 399 aaPredicted RBP14.34□□□□□ -0.11
CIITA-212ENST00000618207 TNRC6CQ9HCJ0 1690 aaKnown RBP14.34□□□□□ -0.11
CIITA-212ENST00000618207 LDHBP07195 334 aaKnown RBP14.34□□□□□ -0.11
CIITA-212ENST00000618207 GPSM2P81274 684 aa14.34□□□□□ -0.11
CIITA-212ENST00000618207 SAFBQ15424 915 aaKnown RBP eCLIP14.34□□□□□ -0.11
CIITA-212ENST00000618207 SEC23AQ15436 765 aa14.34□□□□□ -0.11
CIITA-212ENST00000618207 V9GY48 417 aaPredicted RBP14.34□□□□□ -0.11
CIITA-212ENST00000618207 FAM205CA6NFA0 338 aa14.33□□□□□ -0.11
CIITA-212ENST00000618207 TSPY2A6NKD2 308 aa14.33□□□□□ -0.11
CIITA-212ENST00000618207 SLC39A14Q15043 492 aa14.33□□□□□ -0.11
CIITA-212ENST00000618207 AXDND1Q5T1B0 1012 aaPredicted RBP14.33□□□□□ -0.11
CIITA-212ENST00000618207 BRIP1Q9BX63 1249 aa14.33□□□□□ -0.11
CIITA-212ENST00000618207 SAP30BPQ9UHR5 308 aaKnown RBP14.33□□□□□ -0.11
CIITA-212ENST00000618207 TAF1LQ8IZX4 1826 aa14.33□□□□□ -0.11
CIITA-212ENST00000618207 GRIN1Q05586 938 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 KIAA2012Q0VF49 1180 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 STX1AQ16623 288 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 PAXIP1Q6ZW49 1069 aaPredicted RBP14.33□□□□□ -0.12
CIITA-212ENST00000618207 CATIPQ7Z7H3 387 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 NBPF11Q86T75 865 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 TMTC2Q8N394 836 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 CERKQ8TCT0 537 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 MMP1P03956 469 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 PTGS1P23219 599 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 NOSTRINQ8IVI9 506 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 AOPEPQ8N6M6 819 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 SLC44A5Q8NCS7 719 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 SH3RF3Q8TEJ3 882 aaPredicted RBP14.33□□□□□ -0.12
CIITA-212ENST00000618207 TGFBRAP1Q8WUH2 860 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 CABP5Q9NP86 173 aa14.33□□□□□ -0.12
CIITA-212ENST00000618207 NHSQ6T4R5 1651 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 CCDC196A0A1B0GTZ2 297 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 C6orf229H3BNL8 230 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 SEMA3EO15041 775 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 CTAGE5O15320 804 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 SYKP43405 635 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 DPCR1Q3MIW9 517 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 OLFM4Q6UX06 510 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 ECM29Q5VYK3 1845 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 RIMBP2O15034 1052 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 DEXIO95424 95 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 SLC3A2P08195 630 aaKnown RBP14.32□□□□□ -0.12
CIITA-212ENST00000618207 SHC4Q6S5L8 630 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 MAPKAPK5Q8IW41 473 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 PDILTQ8N807 584 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 ANAPC4Q9UJX5 808 aa14.32□□□□□ -0.12
CIITA-212ENST00000618207 PCDHB6Q9Y5E3 794 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms