RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 CCL15-CCL14A0A0B4J2E2 113 aa30.12■■■□□ 2.41
PMS1-220ENST00000618056 TBC1D8O95759 1140 aa30.12■■■□□ 2.41
PMS1-220ENST00000618056 SNAPC2Q13487 334 aa30.12■■■□□ 2.41
PMS1-220ENST00000618056 CCL15Q16663 113 aa30.12■■■□□ 2.41
PMS1-220ENST00000618056 TSHZ3Q63HK5 1081 aa30.12■■■□□ 2.41
PMS1-220ENST00000618056 METTL16Q86W50 562 aaKnown RBP30.12■■■□□ 2.41
PMS1-220ENST00000618056 RWDD1Q9H446 243 aaPredicted RBP30.12■■■□□ 2.41
PMS1-220ENST00000618056 ZBTB47Q9UFB7 747 aaPredicted RBP30.12■■■□□ 2.41
PMS1-220ENST00000618056 CETPP11597 493 aa30.11■■■□□ 2.41
PMS1-220ENST00000618056 USP5P45974 858 aa30.11■■■□□ 2.41
PMS1-220ENST00000618056 UBE3CQ15386 1083 aa30.11■■■□□ 2.41
PMS1-220ENST00000618056 ANKRD45Q5TZF3 282 aa30.11■■■□□ 2.41
PMS1-220ENST00000618056 PALD1Q9ULE6 856 aa30.11■■■□□ 2.41
PMS1-220ENST00000618056 KCNH4Q9UQ05 1017 aa30.11■■■□□ 2.41
PMS1-220ENST00000618056 SALL3Q9BXA9 1300 aa30.1■■■□□ 2.41
PMS1-220ENST00000618056 FAM196BA6NMK8 535 aa30.1■■■□□ 2.41
PMS1-220ENST00000618056 ZSCAN25Q6NSZ9 544 aa30.1■■■□□ 2.41
PMS1-220ENST00000618056 FOXP4Q8IVH2 680 aaPredicted RBP30.1■■■□□ 2.41
PMS1-220ENST00000618056 OTUD7AQ8TE49 926 aaPredicted RBP30.1■■■□□ 2.41
PMS1-220ENST00000618056 PICK1Q9NRD5 415 aa30.1■■■□□ 2.41
PMS1-220ENST00000618056 ERC2O15083 957 aa30.09■■■□□ 2.41
PMS1-220ENST00000618056 PTPRAP18433 802 aa30.09■■■□□ 2.41
PMS1-220ENST00000618056 SMC5Q8IY18 1101 aa30.09■■■□□ 2.41
PMS1-220ENST00000618056 CRNKL1Q9BZJ0 848 aaKnown RBP30.09■■■□□ 2.41
PMS1-220ENST00000618056 MX1P20591 662 aa30.08■■■□□ 2.41
PMS1-220ENST00000618056 KBTBD3Q8NAB2 608 aa30.08■■■□□ 2.41
PMS1-220ENST00000618056 PI4K2BQ8TCG2 481 aa30.08■■■□□ 2.41
PMS1-220ENST00000618056 GLRX3O76003 335 aaKnown RBP30.07■■■□□ 2.4
PMS1-220ENST00000618056 HLA-DOAP06340 250 aa30.07■■■□□ 2.4
PMS1-220ENST00000618056 SAP30BPQ9UHR5 308 aaKnown RBP30.07■■■□□ 2.4
PMS1-220ENST00000618056 GPR25O00155 361 aa30.06■■■□□ 2.4
PMS1-220ENST00000618056 LCORLQ8N3X6 602 aa30.06■■■□□ 2.4
PMS1-220ENST00000618056 R3HDMLQ9H3Y0 253 aa30.06■■■□□ 2.4
PMS1-220ENST00000618056 DNAJC18Q9H819 358 aa30.06■■■□□ 2.4
PMS1-220ENST00000618056 ZCCHC17Q9NP64 241 aaKnown RBP30.06■■■□□ 2.4
PMS1-220ENST00000618056 BAZ2AQ9UIF9 1905 aaKnown RBP30.06■■■□□ 2.4
PMS1-220ENST00000618056 CXCL11O14625 94 aa30.06■■■□□ 2.4
PMS1-220ENST00000618056 CAP2P40123 477 aa30.06■■■□□ 2.4
PMS1-220ENST00000618056 SLFNL1Q499Z3 407 aa30.06■■■□□ 2.4
PMS1-220ENST00000618056 ZHX2Q9Y6X8 837 aa30.06■■■□□ 2.4
PMS1-220ENST00000618056 FAM43AQ8N2R8 423 aa30.05■■■□□ 2.4
PMS1-220ENST00000618056 EHD4Q9H223 541 aa30.05■■■□□ 2.4
PMS1-220ENST00000618056 IGHDP01880 384 aa30.04■■■□□ 2.4
PMS1-220ENST00000618056 CRACR2BQ8N4Y2 399 aaPredicted RBP30.04■■■□□ 2.4
PMS1-220ENST00000618056 ZNF296Q8WUU4 475 aaPredicted RBP30.04■■■□□ 2.4
PMS1-220ENST00000618056 AFG3L2Q9Y4W6 797 aa30.04■■■□□ 2.4
PMS1-220ENST00000618056 MBD4O95243 580 aa30.03■■■□□ 2.4
PMS1-220ENST00000618056 CHGBP05060 677 aa30.03■■■□□ 2.4
PMS1-220ENST00000618056 CRHR2Q13324 411 aa30.03■■■□□ 2.4
PMS1-220ENST00000618056 RRP1BQ14684 758 aaKnown RBP30.03■■■□□ 2.4
PMS1-220ENST00000618056 IFFO2Q5TF58 517 aa30.03■■■□□ 2.4
PMS1-220ENST00000618056 TTC6Q86TZ1 520 aa30.03■■■□□ 2.4
PMS1-220ENST00000618056 TRIM34Q9BYJ4 488 aa30.03■■■□□ 2.4
PMS1-220ENST00000618056 ARMT1Q9H993 441 aa30.03■■■□□ 2.4
PMS1-220ENST00000618056 STAP2Q9UGK3 403 aa30.03■■■□□ 2.4
PMS1-220ENST00000618056 BTBD19C9JJ37 291 aa30.02■■■□□ 2.4
PMS1-220ENST00000618056 ZFYP08048 801 aaPredicted RBP30.01■■■□□ 2.4
PMS1-220ENST00000618056 MOGSQ13724 837 aa30.01■■■□□ 2.4
PMS1-220ENST00000618056 TBC1D2Q9BYX2 928 aa30.01■■■□□ 2.4
PMS1-220ENST00000618056 DCP1AQ9NPI6 582 aaPredicted RBP30.01■■■□□ 2.4
PMS1-220ENST00000618056 SERPINB13Q9UIV8 391 aa30.01■■■□□ 2.4
PMS1-220ENST00000618056 SDR42E1Q8WUS8 393 aa30■■■□□ 2.39
PMS1-220ENST00000618056 A0A0G2JLL6 359 aaPredicted RBP29.99■■■□□ 2.39
PMS1-220ENST00000618056 FKTNO75072 461 aa29.99■■■□□ 2.39
PMS1-220ENST00000618056 TAF1CQ15572 869 aaPredicted RBP29.99■■■□□ 2.39
PMS1-220ENST00000618056 SLC4A8Q2Y0W8 1093 aa29.99■■■□□ 2.39
PMS1-220ENST00000618056 PRRT2Q7Z6L0 340 aaPredicted RBP29.99■■■□□ 2.39
PMS1-220ENST00000618056 ANKRD23Q86SG2 305 aa29.99■■■□□ 2.39
PMS1-220ENST00000618056 PUS7LQ9H0K6 701 aaKnown RBP29.99■■■□□ 2.39
PMS1-220ENST00000618056 ATP8A2Q9NTI2 1148 aa29.99■■■□□ 2.39
PMS1-220ENST00000618056 GINM1Q9NU53 330 aa29.99■■■□□ 2.39
PMS1-220ENST00000618056 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.99■■■□□ 2.39
PMS1-220ENST00000618056 MYH8P13535 1937 aa29.99■■■□□ 2.39
PMS1-220ENST00000618056 RNF113AO15541 343 aaKnown RBP29.99■■■□□ 2.39
PMS1-220ENST00000618056 PDE1AP54750 535 aa29.99■■■□□ 2.39
PMS1-220ENST00000618056 LRRFIP1Q32MZ4 808 aaKnown RBP29.99■■■□□ 2.39
PMS1-220ENST00000618056 ZFYVE28Q9HCC9 887 aa29.99■■■□□ 2.39
PMS1-220ENST00000618056 MCM9Q9NXL9 1143 aa29.99■■■□□ 2.39
PMS1-220ENST00000618056 ASNSP08243 561 aa29.98■■■□□ 2.39
PMS1-220ENST00000618056 TATDN1Q6P1N9 297 aa29.98■■■□□ 2.39
PMS1-220ENST00000618056 APPBP2Q92624 585 aa29.98■■■□□ 2.39
PMS1-220ENST00000618056 LNPKQ9C0E8 428 aa29.98■■■□□ 2.39
PMS1-220ENST00000618056 PRKAB2O43741 272 aa29.97■■■□□ 2.39
PMS1-220ENST00000618056 POLR3DP05423 398 aaPredicted RBP29.97■■■□□ 2.39
PMS1-220ENST00000618056 PLCD1P51178 756 aa29.97■■■□□ 2.39
PMS1-220ENST00000618056 IRX6P78412 446 aaPredicted RBP29.97■■■□□ 2.39
PMS1-220ENST00000618056 NUCB1Q02818 461 aa29.97■■■□□ 2.39
PMS1-220ENST00000618056 FASTKD5Q7L8L6 764 aaKnown RBP29.97■■■□□ 2.39
PMS1-220ENST00000618056 CTU1Q7Z7A3 348 aaKnown RBP29.97■■■□□ 2.39
PMS1-220ENST00000618056 LOC285556D6RIA3 1793 aa29.97■■■□□ 2.39
PMS1-220ENST00000618056 USP17L5A8MUK1 530 aa29.96■■■□□ 2.39
PMS1-220ENST00000618056 DGKZQ13574 1117 aa29.96■■■□□ 2.39
PMS1-220ENST00000618056 CCDC84Q86UT8 332 aaPredicted RBP29.96■■■□□ 2.39
PMS1-220ENST00000618056 CHD1LQ86WJ1 897 aa29.96■■■□□ 2.39
PMS1-220ENST00000618056 TAOK2Q9UL54 1235 aa29.96■■■□□ 2.39
PMS1-220ENST00000618056 B4GALNT3Q6L9W6 998 aa29.95■■■□□ 2.39
PMS1-220ENST00000618056 ZNF280CQ8ND82 737 aa29.95■■■□□ 2.39
PMS1-220ENST00000618056 MCOLN1Q9GZU1 580 aa29.95■■■□□ 2.39
PMS1-220ENST00000618056 TRIM75PA6NK02 468 aa29.94■■■□□ 2.38
PMS1-220ENST00000618056 PDHXO00330 501 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms