RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 SIL1Q9H173 461 aa10.57□□□□□ -0.72
GPC6-202ENST00000617456 PAK6Q9NQU5 681 aaPredicted RBP10.57□□□□□ -0.72
GPC6-202ENST00000617456 GNL3LQ9NVN8 582 aaKnown RBP10.57□□□□□ -0.72
GPC6-202ENST00000617456 DOCK3Q8IZD9 2030 aa10.57□□□□□ -0.72
GPC6-202ENST00000617456 ATRNL1Q5VV63 1379 aa10.56□□□□□ -0.72
GPC6-202ENST00000617456 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
GPC6-202ENST00000617456 CTNND1O60716 968 aaKnown RBP10.56□□□□□ -0.72
GPC6-202ENST00000617456 CHRM1P11229 460 aaPredicted RBP10.56□□□□□ -0.72
GPC6-202ENST00000617456 SYN1P17600 705 aa10.56□□□□□ -0.72
GPC6-202ENST00000617456 PHKA1P46020 1223 aa10.56□□□□□ -0.72
GPC6-202ENST00000617456 RFX5P48382 616 aaPredicted RBP10.56□□□□□ -0.72
GPC6-202ENST00000617456 RARSP54136 660 aaKnown RBP10.56□□□□□ -0.72
GPC6-202ENST00000617456 TREML2Q5T2D2 321 aa10.56□□□□□ -0.72
GPC6-202ENST00000617456 Q7L0L9 218 aa10.56□□□□□ -0.72
GPC6-202ENST00000617456 DEFB123Q8N688 67 aa10.56□□□□□ -0.72
GPC6-202ENST00000617456 AGTPBP1Q9UPW5 1226 aa10.56□□□□□ -0.72
GPC6-202ENST00000617456 SLC45A1Q9Y2W3 748 aa10.56□□□□□ -0.72
GPC6-202ENST00000617456 A0A0U1RQG5 324 aaPredicted RBP10.55□□□□□ -0.72
GPC6-202ENST00000617456 DDTLA6NHG4 134 aaPredicted RBP10.55□□□□□ -0.72
GPC6-202ENST00000617456 ENTPD3O75355 529 aa10.55□□□□□ -0.72
GPC6-202ENST00000617456 UBTFL1P0CB47 393 aaPredicted RBP10.55□□□□□ -0.72
GPC6-202ENST00000617456 TRIM32Q13049 653 aa10.55□□□□□ -0.72
GPC6-202ENST00000617456 ATG9AQ7Z3C6 839 aa10.55□□□□□ -0.72
GPC6-202ENST00000617456 DZIP1Q86YF9 867 aaKnown RBP10.55□□□□□ -0.72
GPC6-202ENST00000617456 IDI2Q9BXS1 227 aa10.55□□□□□ -0.72
GPC6-202ENST00000617456 DDX4Q9NQI0 724 aaKnown RBP10.55□□□□□ -0.72
GPC6-202ENST00000617456 CEP126Q9P2H0 1117 aa10.55□□□□□ -0.72
GPC6-202ENST00000617456 PNMA3Q9UL41 463 aa10.55□□□□□ -0.72
GPC6-202ENST00000617456 DENND2AQ9ULE3 1009 aa10.55□□□□□ -0.72
GPC6-202ENST00000617456 NOB1Q9ULX3 412 aaKnown RBP10.55□□□□□ -0.72
GPC6-202ENST00000617456 MYH13Q9UKX3 1938 aa10.54□□□□□ -0.72
GPC6-202ENST00000617456 FAM196BA6NMK8 535 aa10.54□□□□□ -0.72
GPC6-202ENST00000617456 HMGCRP04035 888 aa10.54□□□□□ -0.72
GPC6-202ENST00000617456 GNAI3P08754 354 aa10.54□□□□□ -0.72
GPC6-202ENST00000617456 ADORA1P30542 326 aa10.54□□□□□ -0.72
GPC6-202ENST00000617456 IL15P40933 162 aaPredicted RBP10.54□□□□□ -0.72
GPC6-202ENST00000617456 BTDP43251 543 aa10.54□□□□□ -0.72
GPC6-202ENST00000617456 MAGEA10P43363 369 aaPredicted RBP10.54□□□□□ -0.72
GPC6-202ENST00000617456 MTX1Q13505 466 aa10.54□□□□□ -0.72
GPC6-202ENST00000617456 FAM110CQ1W6H9 321 aa10.54□□□□□ -0.72
GPC6-202ENST00000617456 ARID3AQ99856 593 aa10.54□□□□□ -0.72
GPC6-202ENST00000617456 GDF15Q99988 308 aa10.54□□□□□ -0.72
GPC6-202ENST00000617456 COPRSQ9NQ92 184 aa10.54□□□□□ -0.72
GPC6-202ENST00000617456 ABCF2Q9UG63 623 aa10.54□□□□□ -0.72
GPC6-202ENST00000617456 RBM19Q9Y4C8 960 aaKnown RBP10.54□□□□□ -0.72
GPC6-202ENST00000617456 SALL1Q9NSC2 1324 aa10.54□□□□□ -0.72
GPC6-202ENST00000617456 ALPK3Q96L96 1907 aa10.53□□□□□ -0.72
GPC6-202ENST00000617456 SEMA3EO15041 775 aa10.53□□□□□ -0.72
GPC6-202ENST00000617456 CAPN2P17655 700 aa10.53□□□□□ -0.72
GPC6-202ENST00000617456 BMP8BP34820 402 aa10.53□□□□□ -0.72
GPC6-202ENST00000617456 MNX1P50219 401 aaPredicted RBP10.53□□□□□ -0.72
GPC6-202ENST00000617456 SPP2Q13103 211 aa10.53□□□□□ -0.72
GPC6-202ENST00000617456 ZGPATQ8N5A5 531 aaKnown RBP10.53□□□□□ -0.72
GPC6-202ENST00000617456 NBPF3Q9H094 633 aa10.53□□□□□ -0.72
GPC6-202ENST00000617456 C11orf49Q9H6J7 331 aa10.53□□□□□ -0.72
GPC6-202ENST00000617456 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.53□□□□□ -0.72
GPC6-202ENST00000617456 HMX1Q9NP08 348 aaPredicted RBP10.53□□□□□ -0.72
GPC6-202ENST00000617456 GAKO14976 1311 aa10.53□□□□□ -0.72
GPC6-202ENST00000617456 DOCK2Q92608 1830 aa10.52□□□□□ -0.73
GPC6-202ENST00000617456 CYP2B6P20813 491 aa10.52□□□□□ -0.73
GPC6-202ENST00000617456 HMGCS2P54868 508 aa10.52□□□□□ -0.73
GPC6-202ENST00000617456 MAP3K10Q02779 954 aa10.52□□□□□ -0.73
GPC6-202ENST00000617456 CCDC102BQ68D86 513 aa10.52□□□□□ -0.73
GPC6-202ENST00000617456 SLF2Q8IX21 1173 aa10.52□□□□□ -0.73
GPC6-202ENST00000617456 ANKLE1Q8NAG6 615 aa10.52□□□□□ -0.73
GPC6-202ENST00000617456 UBE2OQ9C0C9 1292 aaKnown RBP10.52□□□□□ -0.73
GPC6-202ENST00000617456 PA2G4Q9UQ80 394 aaKnown RBP10.52□□□□□ -0.73
GPC6-202ENST00000617456 MYH2Q9UKX2 1941 aa10.52□□□□□ -0.73
GPC6-202ENST00000617456 PDS5AQ29RF7 1337 aaKnown RBP10.52□□□□□ -0.73
GPC6-202ENST00000617456 RPTORQ8N122 1335 aa10.52□□□□□ -0.73
GPC6-202ENST00000617456 RFX7Q2KHR2 1363 aa10.52□□□□□ -0.73
GPC6-202ENST00000617456 PTPRFP10586 1907 aa10.51□□□□□ -0.73
GPC6-202ENST00000617456 PEX10O60683 326 aa10.51□□□□□ -0.73
GPC6-202ENST00000617456 IGSF3O75054 1194 aa10.51□□□□□ -0.73
GPC6-202ENST00000617456 GCLCP48506 637 aaPredicted RBP10.51□□□□□ -0.73
GPC6-202ENST00000617456 RASGRF1Q13972 1273 aa10.51□□□□□ -0.73
GPC6-202ENST00000617456 TDHQ8IZJ6 230 aa10.51□□□□□ -0.73
GPC6-202ENST00000617456 PROCA1Q8NCQ7 364 aaPredicted RBP10.51□□□□□ -0.73
GPC6-202ENST00000617456 ZNF280CQ8ND82 737 aa10.51□□□□□ -0.73
GPC6-202ENST00000617456 IPO4Q8TEX9 1081 aaKnown RBP10.51□□□□□ -0.73
GPC6-202ENST00000617456 TRIB2Q92519 343 aa10.51□□□□□ -0.73
GPC6-202ENST00000617456 ASCC2Q9H1I8 757 aaPredicted RBP10.51□□□□□ -0.73
GPC6-202ENST00000617456 MTMR10Q9NXD2 777 aa10.51□□□□□ -0.73
GPC6-202ENST00000617456 GJD2Q9UKL4 321 aa10.51□□□□□ -0.73
GPC6-202ENST00000617456 AKAP2Q9Y2D5 859 aa10.51□□□□□ -0.73
GPC6-202ENST00000617456 STXBP5LQ9Y2K9 1186 aa10.51□□□□□ -0.73
GPC6-202ENST00000617456 MROH7-TTC4A0A0A0MT08 1334 aa10.51□□□□□ -0.73
GPC6-202ENST00000617456 DOCK1Q14185 1865 aa10.51□□□□□ -0.73
GPC6-202ENST00000617456 PRKAR2AP13861 404 aaKnown RBP10.5□□□□□ -0.73
GPC6-202ENST00000617456 VASPP50552 380 aaPredicted RBP10.5□□□□□ -0.73
GPC6-202ENST00000617456 TIMM10P62072 90 aa10.5□□□□□ -0.73
GPC6-202ENST00000617456 IRX3P78415 501 aaPredicted RBP10.5□□□□□ -0.73
GPC6-202ENST00000617456 PABPC4Q13310 644 aaKnown RBP eCLIP10.5□□□□□ -0.73
GPC6-202ENST00000617456 LRIT3Q3SXY7 679 aa10.5□□□□□ -0.73
GPC6-202ENST00000617456 SPTY2D1Q68D10 685 aaPredicted RBP10.5□□□□□ -0.73
GPC6-202ENST00000617456 GPR153Q6NV75 609 aa10.5□□□□□ -0.73
GPC6-202ENST00000617456 ATF7IPQ6VMQ6 1270 aa10.5□□□□□ -0.73
GPC6-202ENST00000617456 FAM163AQ96GL9 167 aaPredicted RBP10.5□□□□□ -0.73
GPC6-202ENST00000617456 OSBPL5Q9H0X9 879 aaPredicted RBP10.5□□□□□ -0.73
GPC6-202ENST00000617456 PHIPQ8WWQ0 1821 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms