RNA–Protein interactions for RNA: ENST00000616833.5

CLN5-203, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-203ENST00000616833 CTR9Q6PD62 1173 aa25.3■■□□□ 1.64
CLN5-203ENST00000616833 SCN7AQ01118 1682 aa25.3■■□□□ 1.64
CLN5-203ENST00000616833 TRAPPC3LQ5T215 181 aa25.3■■□□□ 1.64
CLN5-203ENST00000616833 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.3■■□□□ 1.64
CLN5-203ENST00000616833 OXER1Q8TDS5 423 aa25.3■■□□□ 1.64
CLN5-203ENST00000616833 BAZ2BQ9UIF8 2168 aaKnown RBP25.29■■□□□ 1.64
CLN5-203ENST00000616833 ZNF202O95125 648 aa25.29■■□□□ 1.64
CLN5-203ENST00000616833 CCDC186Q7Z3E2 898 aa25.29■■□□□ 1.64
CLN5-203ENST00000616833 ENAHQ8N8S7 591 aaPredicted RBP25.29■■□□□ 1.64
CLN5-203ENST00000616833 FANCBQ8NB91 859 aa25.29■■□□□ 1.64
CLN5-203ENST00000616833 TDRD7Q8NHU6 1098 aaKnown RBP25.29■■□□□ 1.64
CLN5-203ENST00000616833 GOLGA6L19H0YKK7 550 aa25.29■■□□□ 1.64
CLN5-203ENST00000616833 GRIK5Q16478 980 aa25.29■■□□□ 1.64
CLN5-203ENST00000616833 AOPEPQ8N6M6 819 aa25.29■■□□□ 1.64
CLN5-203ENST00000616833 ESR2Q92731 530 aa25.29■■□□□ 1.64
CLN5-203ENST00000616833 RNF41Q9H4P4 317 aaPredicted RBP25.29■■□□□ 1.64
CLN5-203ENST00000616833 ZNF75DP51815 510 aa25.28■■□□□ 1.64
CLN5-203ENST00000616833 SLC39A14Q15043 492 aa25.28■■□□□ 1.64
CLN5-203ENST00000616833 DPCR1Q3MIW9 517 aa25.28■■□□□ 1.64
CLN5-203ENST00000616833 DIS3L2Q8IYB7 885 aaKnown RBP25.28■■□□□ 1.64
CLN5-203ENST00000616833 GJD4Q96KN9 370 aaPredicted RBP25.28■■□□□ 1.64
CLN5-203ENST00000616833 IFNAR1P17181 557 aa25.28■■□□□ 1.64
CLN5-203ENST00000616833 GRIN1Q05586 938 aa25.28■■□□□ 1.64
CLN5-203ENST00000616833 NBPF11Q86T75 865 aa25.28■■□□□ 1.64
CLN5-203ENST00000616833 TIAM2Q8IVF5 1701 aa25.27■■□□□ 1.64
CLN5-203ENST00000616833 BECN2A8MW95 431 aa25.27■■□□□ 1.64
CLN5-203ENST00000616833 PLEKHA8P1O95397 391 aa25.27■■□□□ 1.64
CLN5-203ENST00000616833 SHC4Q6S5L8 630 aa25.27■■□□□ 1.64
CLN5-203ENST00000616833 TNRC6CQ9HCJ0 1690 aaKnown RBP25.27■■□□□ 1.64
CLN5-203ENST00000616833 A0A1W2PQ27 194 aa25.27■■□□□ 1.64
CLN5-203ENST00000616833 A0A1W2PQ64 194 aa25.27■■□□□ 1.64
CLN5-203ENST00000616833 A0A1W2PQD8 194 aa25.27■■□□□ 1.64
CLN5-203ENST00000616833 FAM205CA6NFA0 338 aa25.27■■□□□ 1.64
CLN5-203ENST00000616833 CTAGE5O15320 804 aa25.27■■□□□ 1.64
CLN5-203ENST00000616833 SEC23AQ15436 765 aa25.27■■□□□ 1.64
CLN5-203ENST00000616833 DHX40Q8IX18 779 aaKnown RBP25.27■■□□□ 1.64
CLN5-203ENST00000616833 CRACR2BQ8N4Y2 399 aaPredicted RBP25.27■■□□□ 1.64
CLN5-203ENST00000616833 SHISA4Q96DD7 197 aa25.27■■□□□ 1.64
CLN5-203ENST00000616833 MAP3K14Q99558 947 aa25.27■■□□□ 1.64
CLN5-203ENST00000616833 PTPAQ15257 358 aa25.26■■□□□ 1.63
CLN5-203ENST00000616833 TRIM22Q8IYM9 498 aa25.26■■□□□ 1.63
CLN5-203ENST00000616833 ZSCAN10Q96SZ4 725 aaPredicted RBP25.26■■□□□ 1.63
CLN5-203ENST00000616833 VPS54Q9P1Q0 977 aa25.26■■□□□ 1.63
CLN5-203ENST00000616833 NOLC1Q14978 699 aaKnown RBP eCLIP25.26■■□□□ 1.63
CLN5-203ENST00000616833 DIXDC1Q155Q3 683 aa25.26■■□□□ 1.63
CLN5-203ENST00000616833 AFF2P51816 1311 aa25.26■■□□□ 1.63
CLN5-203ENST00000616833 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.25■■□□□ 1.63
CLN5-203ENST00000616833 ARID5BQ14865 1188 aa25.25■■□□□ 1.63
CLN5-203ENST00000616833 IFIT1BQ5T764 474 aaKnown RBP25.25■■□□□ 1.63
CLN5-203ENST00000616833 SEPT12Q8IYM1 358 aa25.25■■□□□ 1.63
CLN5-203ENST00000616833 MTMR7Q9Y216 660 aa25.25■■□□□ 1.63
CLN5-203ENST00000616833 USP17L8P0C7I0 530 aa25.25■■□□□ 1.63
CLN5-203ENST00000616833 TOB1P50616 345 aaPredicted RBP25.25■■□□□ 1.63
CLN5-203ENST00000616833 CCDC144BQ3MJ40 725 aa25.25■■□□□ 1.63
CLN5-203ENST00000616833 MMP1P03956 469 aa25.24■■□□□ 1.63
CLN5-203ENST00000616833 U2AF2P26368 475 aaKnown RBP eCLIP25.24■■□□□ 1.63
CLN5-203ENST00000616833 PLA2G4DQ86XP0 818 aa25.24■■□□□ 1.63
CLN5-203ENST00000616833 CNBD1Q8NA66 436 aa25.24■■□□□ 1.63
CLN5-203ENST00000616833 DCP1AQ9NPI6 582 aaPredicted RBP25.24■■□□□ 1.63
CLN5-203ENST00000616833 DZIP1Q86YF9 867 aaKnown RBP25.24■■□□□ 1.63
CLN5-203ENST00000616833 NOSTRINQ8IVI9 506 aa25.24■■□□□ 1.63
CLN5-203ENST00000616833 ANKRD2Q9GZV1 360 aa25.24■■□□□ 1.63
CLN5-203ENST00000616833 ANO10Q9NW15 660 aa25.24■■□□□ 1.63
CLN5-203ENST00000616833 KIAA1468Q9P260 1216 aa25.24■■□□□ 1.63
CLN5-203ENST00000616833 CLIP2Q9UDT6 1046 aa25.24■■□□□ 1.63
CLN5-203ENST00000616833 SLC3A2P08195 630 aaKnown RBP25.23■■□□□ 1.63
CLN5-203ENST00000616833 SYKP43405 635 aa25.23■■□□□ 1.63
CLN5-203ENST00000616833 PCDHB6Q9Y5E3 794 aa25.23■■□□□ 1.63
CLN5-203ENST00000616833 V9GY48 417 aaPredicted RBP25.23■■□□□ 1.63
CLN5-203ENST00000616833 CMA1P23946 247 aa25.22■■□□□ 1.63
CLN5-203ENST00000616833 PNOCQ13519 176 aa25.22■■□□□ 1.63
CLN5-203ENST00000616833 NOM1Q5C9Z4 860 aaKnown RBP25.22■■□□□ 1.63
CLN5-203ENST00000616833 FOXN1O15353 648 aa25.22■■□□□ 1.63
CLN5-203ENST00000616833 ZRSR1Q15695 479 aaKnown RBP25.22■■□□□ 1.63
CLN5-203ENST00000616833 DYNLL2Q96FJ2 89 aa25.22■■□□□ 1.63
CLN5-203ENST00000616833 BRIP1Q9BX63 1249 aa25.22■■□□□ 1.63
CLN5-203ENST00000616833 CABP5Q9NP86 173 aa25.22■■□□□ 1.63
CLN5-203ENST00000616833 MCM9Q9NXL9 1143 aa25.22■■□□□ 1.63
CLN5-203ENST00000616833 ANAPC4Q9UJX5 808 aa25.22■■□□□ 1.63
CLN5-203ENST00000616833 EARS2Q5JPH6 523 aaKnown RBP25.21■■□□□ 1.63
CLN5-203ENST00000616833 SAFBQ15424 915 aaKnown RBP eCLIP25.21■■□□□ 1.63
CLN5-203ENST00000616833 CEP57L1Q8IYX8 460 aa25.21■■□□□ 1.63
CLN5-203ENST00000616833 STK36Q9NRP7 1315 aa25.2■■□□□ 1.63
CLN5-203ENST00000616833 DEXIO95424 95 aa25.2■■□□□ 1.62
CLN5-203ENST00000616833 HSPA1LP34931 641 aa25.2■■□□□ 1.62
CLN5-203ENST00000616833 CRNKL1Q9BZJ0 848 aaKnown RBP25.2■■□□□ 1.62
CLN5-203ENST00000616833 GOLGA6L6A8MZA4 724 aa25.2■■□□□ 1.62
CLN5-203ENST00000616833 VEGFAP15692 232 aaPredicted RBP25.2■■□□□ 1.62
CLN5-203ENST00000616833 PRR5LQ6MZQ0 368 aa25.2■■□□□ 1.62
CLN5-203ENST00000616833 DUOX1Q9NRD9 1551 aa25.2■■□□□ 1.62
CLN5-203ENST00000616833 NHSQ6T4R5 1651 aa25.2■■□□□ 1.62
CLN5-203ENST00000616833 LONRF3Q496Y0 759 aa25.19■■□□□ 1.62
CLN5-203ENST00000616833 IQCA1Q86XH1 822 aa25.19■■□□□ 1.62
CLN5-203ENST00000616833 TMTC2Q8N394 836 aa25.19■■□□□ 1.62
CLN5-203ENST00000616833 SH3RF3Q8TEJ3 882 aaPredicted RBP25.19■■□□□ 1.62
CLN5-203ENST00000616833 ZNF831Q5JPB2 1677 aa25.19■■□□□ 1.62
CLN5-203ENST00000616833 AKAP17AQ02040 695 aaKnown RBP25.19■■□□□ 1.62
CLN5-203ENST00000616833 FILIP1Q7Z7B0 1213 aa25.19■■□□□ 1.62
CLN5-203ENST00000616833 CATIPQ7Z7H3 387 aa25.19■■□□□ 1.62
CLN5-203ENST00000616833 PDILTQ8N807 584 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms