RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 CERS3Q8IU89 383 aa20.62■□□□□ 0.89
LHX1-202ENST00000616237 FAM43AQ8N2R8 423 aa20.62■□□□□ 0.89
LHX1-202ENST00000616237 PI4K2BQ8TCG2 481 aa20.62■□□□□ 0.89
LHX1-202ENST00000616237 GCC1Q96CN9 775 aa20.62■□□□□ 0.89
LHX1-202ENST00000616237 KCNH4Q9UQ05 1017 aa20.62■□□□□ 0.89
LHX1-202ENST00000616237 GPR25O00155 361 aa20.61■□□□□ 0.89
LHX1-202ENST00000616237 IGHDP01880 384 aa20.61■□□□□ 0.89
LHX1-202ENST00000616237 PTPRAP18433 802 aa20.61■□□□□ 0.89
LHX1-202ENST00000616237 USP5P45974 858 aa20.61■□□□□ 0.89
LHX1-202ENST00000616237 SLC4A8Q2Y0W8 1093 aa20.61■□□□□ 0.89
LHX1-202ENST00000616237 IFFO2Q5TF58 517 aa20.61■□□□□ 0.89
LHX1-202ENST00000616237 CCDC84Q86UT8 332 aaPredicted RBP20.61■□□□□ 0.89
LHX1-202ENST00000616237 LCORLQ8N3X6 602 aa20.61■□□□□ 0.89
LHX1-202ENST00000616237 ZNF296Q8WUU4 475 aaPredicted RBP20.61■□□□□ 0.89
LHX1-202ENST00000616237 CRHR2Q13324 411 aa20.6■□□□□ 0.89
LHX1-202ENST00000616237 SNAPC2Q13487 334 aa20.6■□□□□ 0.89
LHX1-202ENST00000616237 MOGSQ13724 837 aa20.6■□□□□ 0.89
LHX1-202ENST00000616237 GPATCH3Q96I76 525 aa20.6■□□□□ 0.89
LHX1-202ENST00000616237 HERC5Q9UII4 1024 aaKnown RBP20.6■□□□□ 0.89
LHX1-202ENST00000616237 TTC41PQ6P2S7 1318 aa20.6■□□□□ 0.89
LHX1-202ENST00000616237 CETPP11597 493 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 IRX6P78412 446 aaPredicted RBP20.59■□□□□ 0.89
LHX1-202ENST00000616237 UBE3CQ15386 1083 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 NOM1Q5C9Z4 860 aaKnown RBP20.59■□□□□ 0.89
LHX1-202ENST00000616237 OTUD7BQ6GQQ9 843 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 FOXP4Q8IVH2 680 aaPredicted RBP20.59■□□□□ 0.89
LHX1-202ENST00000616237 SMC5Q8IY18 1101 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.59■□□□□ 0.89
LHX1-202ENST00000616237 ARMT1Q9H993 441 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 PICK1Q9NRD5 415 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 AFG3L2Q9Y4W6 797 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 ZHX2Q9Y6X8 837 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 DOCK1Q14185 1865 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 BTBD19C9JJ37 291 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 CAP2P40123 477 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 JAG1P78504 1218 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 EVX2Q03828 476 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 KBTBD3Q8NAB2 608 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 SDR42E1Q8WUS8 393 aa20.59■□□□□ 0.89
LHX1-202ENST00000616237 PHIPQ8WWQ0 1821 aa20.58■□□□□ 0.89
LHX1-202ENST00000616237 MYH1P12882 1939 aa20.58■□□□□ 0.89
LHX1-202ENST00000616237 PRKAB2O43741 272 aa20.58■□□□□ 0.88
LHX1-202ENST00000616237 MBD4O95243 580 aa20.58■□□□□ 0.88
LHX1-202ENST00000616237 MX1P20591 662 aa20.58■□□□□ 0.88
LHX1-202ENST00000616237 SHROOM1Q2M3G4 852 aaPredicted RBP20.58■□□□□ 0.88
LHX1-202ENST00000616237 PUS7LQ9H0K6 701 aaKnown RBP20.58■□□□□ 0.88
LHX1-202ENST00000616237 DDX60LQ5H9U9 1706 aaKnown RBP20.58■□□□□ 0.88
LHX1-202ENST00000616237 MYH7P12883 1935 aa20.57■□□□□ 0.88
LHX1-202ENST00000616237 CXCL11O14625 94 aa20.57■□□□□ 0.88
LHX1-202ENST00000616237 PLCD1P51178 756 aa20.57■□□□□ 0.88
LHX1-202ENST00000616237 CRNKL1Q9BZJ0 848 aaKnown RBP20.57■□□□□ 0.88
LHX1-202ENST00000616237 RWDD1Q9H446 243 aaPredicted RBP20.57■□□□□ 0.88
LHX1-202ENST00000616237 GLRX3O76003 335 aaKnown RBP20.56■□□□□ 0.88
LHX1-202ENST00000616237 HLA-DOAP06340 250 aa20.56■□□□□ 0.88
LHX1-202ENST00000616237 DGKZQ13574 1117 aa20.56■□□□□ 0.88
LHX1-202ENST00000616237 CRACR2BQ8N4Y2 399 aaPredicted RBP20.56■□□□□ 0.88
LHX1-202ENST00000616237 MCOLN1Q9GZU1 580 aa20.56■□□□□ 0.88
LHX1-202ENST00000616237 DCP1AQ9NPI6 582 aaPredicted RBP20.56■□□□□ 0.88
LHX1-202ENST00000616237 A0A0G2JLL6 359 aaPredicted RBP20.55■□□□□ 0.88
LHX1-202ENST00000616237 ERC2O15083 957 aa20.55■□□□□ 0.88
LHX1-202ENST00000616237 FKTNO75072 461 aa20.55■□□□□ 0.88
LHX1-202ENST00000616237 TAF1CQ15572 869 aaPredicted RBP20.55■□□□□ 0.88
LHX1-202ENST00000616237 B4GALNT3Q6L9W6 998 aa20.55■□□□□ 0.88
LHX1-202ENST00000616237 ZSCAN25Q6NSZ9 544 aa20.55■□□□□ 0.88
LHX1-202ENST00000616237 GPAT2Q6NUI2 795 aa20.55■□□□□ 0.88
LHX1-202ENST00000616237 PRRT2Q7Z6L0 340 aaPredicted RBP20.55■□□□□ 0.88
LHX1-202ENST00000616237 LNPKQ9C0E8 428 aa20.55■□□□□ 0.88
LHX1-202ENST00000616237 EHD4Q9H223 541 aa20.55■□□□□ 0.88
LHX1-202ENST00000616237 STAP2Q9UGK3 403 aa20.55■□□□□ 0.88
LHX1-202ENST00000616237 NAV1Q8NEY1 1877 aa20.54■□□□□ 0.88
LHX1-202ENST00000616237 ATAD5Q96QE3 1844 aa20.54■□□□□ 0.88
LHX1-202ENST00000616237 PDE1AP54750 535 aa20.54■□□□□ 0.88
LHX1-202ENST00000616237 CAP1Q01518 475 aa20.54■□□□□ 0.88
LHX1-202ENST00000616237 OSBP2Q969R2 916 aa20.54■□□□□ 0.88
LHX1-202ENST00000616237 ZCCHC17Q9NP64 241 aaKnown RBP20.54■□□□□ 0.88
LHX1-202ENST00000616237 MCM9Q9NXL9 1143 aa20.54■□□□□ 0.88
LHX1-202ENST00000616237 PTPRFP10586 1907 aa20.53■□□□□ 0.88
LHX1-202ENST00000616237 TRIM75PA6NK02 468 aa20.53■□□□□ 0.88
LHX1-202ENST00000616237 SMIM22K7EJ46 135 aa20.53■□□□□ 0.88
LHX1-202ENST00000616237 GDF11O95390 407 aa20.53■□□□□ 0.88
LHX1-202ENST00000616237 CYP2D6P10635 497 aa20.53■□□□□ 0.88
LHX1-202ENST00000616237 TATDN1Q6P1N9 297 aa20.53■□□□□ 0.88
LHX1-202ENST00000616237 ANKRD23Q86SG2 305 aa20.53■□□□□ 0.88
LHX1-202ENST00000616237 TTC6Q86TZ1 520 aa20.53■□□□□ 0.88
LHX1-202ENST00000616237 ABHD8Q96I13 439 aa20.53■□□□□ 0.88
LHX1-202ENST00000616237 ZFYVE28Q9HCC9 887 aa20.53■□□□□ 0.88
LHX1-202ENST00000616237 ZBTB47Q9UFB7 747 aaPredicted RBP20.53■□□□□ 0.88
LHX1-202ENST00000616237 SERPINB13Q9UIV8 391 aa20.53■□□□□ 0.88
LHX1-202ENST00000616237 PDHXO00330 501 aa20.52■□□□□ 0.88
LHX1-202ENST00000616237 RNF113AO15541 343 aaKnown RBP20.52■□□□□ 0.88
LHX1-202ENST00000616237 GABPAQ06546 454 aa20.52■□□□□ 0.88
LHX1-202ENST00000616237 SPP2Q13103 211 aa20.52■□□□□ 0.88
LHX1-202ENST00000616237 CTU1Q7Z7A3 348 aaKnown RBP20.52■□□□□ 0.88
LHX1-202ENST00000616237 USP17L5A8MUK1 530 aa20.51■□□□□ 0.87
LHX1-202ENST00000616237 POLR3DP05423 398 aaPredicted RBP20.51■□□□□ 0.87
LHX1-202ENST00000616237 SHMT1P34896 483 aa20.51■□□□□ 0.87
LHX1-202ENST00000616237 ZNF280CQ8ND82 737 aa20.51■□□□□ 0.87
LHX1-202ENST00000616237 APPBP2Q92624 585 aa20.51■□□□□ 0.87
LHX1-202ENST00000616237 STRBPQ96SI9 672 aaKnown RBP20.51■□□□□ 0.87
LHX1-202ENST00000616237 TRIM34Q9BYJ4 488 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms