RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 MLECQ14165 292 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 LRRC41Q15345 812 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 FAM209AQ5JX71 171 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 WIPI1Q5MNZ9 446 aaPredicted RBP6.74□□□□□ -1.33
RFC3-203ENST00000616236 WWC2Q6AWC2 1192 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 CNNM4Q6P4Q7 775 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 AFAP1L2Q8N4X5 818 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 KLHL6Q8WZ60 621 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 RELTQ969Z4 430 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 TRERF1Q96PN7 1200 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 RPS6KC1Q96S38 1066 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 SLC9A7Q96T83 725 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 DHRS4Q9BTZ2 278 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 TARS2Q9BW92 718 aaKnown RBP6.74□□□□□ -1.33
RFC3-203ENST00000616236 PCDHA4Q9UN74 947 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 MAPRE3Q9UPY8 281 aa6.74□□□□□ -1.33
RFC3-203ENST00000616236 DNAJA2O60884 412 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 GNALP38405 381 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 PRR20EP86478 221 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 PRR20CP86479 221 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 PRR20DP86480 221 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 PRR20BP86481 221 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 PRR20AP86496 221 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 SLC7A5Q01650 507 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 INPP5AQ14642 412 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 FNDC3BQ53EP0 1204 aaKnown RBP6.73□□□□□ -1.33
RFC3-203ENST00000616236 IFFO2Q5TF58 517 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 NLRC3Q7RTR2 1065 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 MICALL1Q8N3F8 863 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 DDX54Q8TDD1 881 aaKnown RBP6.73□□□□□ -1.33
RFC3-203ENST00000616236 GPBAR1Q8TDU6 330 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 PLPPR2Q96GM1 343 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 ACSBG1Q96GR2 724 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 CDC6Q99741 560 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 RUSC1Q9BVN2 902 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 ZC3H12CQ9C0D7 883 aaKnown RBP6.73□□□□□ -1.33
RFC3-203ENST00000616236 LACRTQ9GZZ8 138 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 ADAM19Q9H013 955 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 CACNA2D2Q9NY47 1150 aa6.73□□□□□ -1.33
RFC3-203ENST00000616236 TNFRSF10CO14798 259 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 KATNA1O75449 491 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 RASGRP1O95267 797 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 CPB1P15086 417 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 PLCG1P19174 1290 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 SDSP20132 328 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 MCL1Q07820 350 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 AP3B2Q13367 1082 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 IKBKEQ14164 716 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 PCSK7Q16549 785 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 DBN1Q16643 649 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.72□□□□□ -1.336e-6■■■■□ 22.6
RFC3-203ENST00000616236 GNPTABQ3T906 1256 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 CCSAPQ6IQ19 270 aaPredicted RBP6.72□□□□□ -1.33
RFC3-203ENST00000616236 LRFN4Q6PJG9 635 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 TRIM46Q7Z4K8 759 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 STRA8Q7Z7C7 330 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 ZFP42Q96MM3 310 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 UBE2OQ9C0C9 1292 aaKnown RBP6.72□□□□□ -1.33
RFC3-203ENST00000616236 CNNM2Q9H8M5 875 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 PRDM16Q9HAZ2 1276 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 ARHGEF4Q9NR80 690 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 SH2B1Q9NRF2 756 aaPredicted RBP6.72□□□□□ -1.33
RFC3-203ENST00000616236 TRIM33Q9UPN9 1127 aa6.72□□□□□ -1.33
RFC3-203ENST00000616236 MRPS23Q9Y3D9 190 aaKnown RBP6.72□□□□□ -1.33
RFC3-203ENST00000616236 A0A1W2PQU0 124 aa6.71□□□□□ -1.34
RFC3-203ENST00000616236 SHTN1A0MZ66 631 aa6.71□□□□□ -1.34
RFC3-203ENST00000616236 H7C1W4 665 aa6.71□□□□□ -1.34
RFC3-203ENST00000616236 AGRPO00253 132 aa6.71□□□□□ -1.34
RFC3-203ENST00000616236 SOX1O00570 391 aaPredicted RBP6.71□□□□□ -1.34
RFC3-203ENST00000616236 UBE4AQ14139 1066 aa6.71□□□□□ -1.34
RFC3-203ENST00000616236 SV2CQ496J9 727 aa6.71□□□□□ -1.34
RFC3-203ENST00000616236 YOD1Q5VVQ6 348 aaPredicted RBP6.71□□□□□ -1.34
RFC3-203ENST00000616236 CDCP2Q5VXM1 449 aa6.71□□□□□ -1.34
RFC3-203ENST00000616236 FAM35AQ86V20 835 aa6.71□□□□□ -1.34
RFC3-203ENST00000616236 LRRTM3Q86VH5 581 aa6.71□□□□□ -1.34
RFC3-203ENST00000616236 ASPSCR1Q9BZE9 553 aa6.71□□□□□ -1.34
RFC3-203ENST00000616236 ZNF214Q9UL59 606 aaPredicted RBP6.71□□□□□ -1.34
RFC3-203ENST00000616236 SNCAIPQ9Y6H5 919 aa6.71□□□□□ -1.34
RFC3-203ENST00000616236 DNAJC25-GNG10A0A024R161 153 aa6.7□□□□□ -1.34
RFC3-203ENST00000616236 TRBV23-1A0A0A0MS06 115 aa6.7□□□□□ -1.34
RFC3-203ENST00000616236 EYA4O95677 639 aa6.7□□□□□ -1.34
RFC3-203ENST00000616236 SCGB1D2O95969 90 aa6.7□□□□□ -1.34
RFC3-203ENST00000616236 DDX46Q7L014 1031 aaKnown RBP6.7□□□□□ -1.34
RFC3-203ENST00000616236 HDXQ7Z353 690 aa6.7□□□□□ -1.34
RFC3-203ENST00000616236 RIN3Q8TB24 985 aa6.7□□□□□ -1.34
RFC3-203ENST00000616236 IPO9Q96P70 1041 aaKnown RBP6.7□□□□□ -1.34
RFC3-203ENST00000616236 APBA2Q99767 749 aa6.7□□□□□ -1.34
RFC3-203ENST00000616236 KLHL3Q9UH77 587 aa6.7□□□□□ -1.34
RFC3-203ENST00000616236 TRAV20A0A0B4J274 112 aa6.69□□□□□ -1.34
RFC3-203ENST00000616236 FAM177BA6PVY3 158 aa6.69□□□□□ -1.34
RFC3-203ENST00000616236 CAND2O75155 1236 aa6.69□□□□□ -1.34
RFC3-203ENST00000616236 CPEP16870 476 aa6.69□□□□□ -1.34
RFC3-203ENST00000616236 FGFR3P22607 806 aa6.69□□□□□ -1.34
RFC3-203ENST00000616236 RAB27AP51159 221 aa6.69□□□□□ -1.34
RFC3-203ENST00000616236 GSTM4Q03013 218 aa6.69□□□□□ -1.34
RFC3-203ENST00000616236 FAM182BQ5T319 152 aa6.69□□□□□ -1.34
RFC3-203ENST00000616236 SYT9Q86SS6 491 aa6.69□□□□□ -1.34
RFC3-203ENST00000616236 C14orf80Q86SX3 495 aa6.69□□□□□ -1.34
RFC3-203ENST00000616236 LEO1Q8WVC0 666 aaPredicted RBP6.69□□□□□ -1.34
RFC3-203ENST00000616236 MRPL4Q9BYD3 311 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms