RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 DOLKQ9UPQ8 538 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 TXNDC9O14530 226 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 CCDC38Q502W7 563 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 SNRPA1P09661 255 aaKnown RBP14.03□□□□□ -0.16
TCF4-248ENST00000616053 MCF2L2Q86YR7 1114 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 RETREG2Q8NC44 543 aa14.03□□□□□ -0.16
TCF4-248ENST00000616053 ANKRD30BQ9BXX2 1392 aa14.02□□□□□ -0.16
TCF4-248ENST00000616053 PPIP5K2O43314 1243 aa14.02□□□□□ -0.16
TCF4-248ENST00000616053 ZNF131P52739 623 aa14.02□□□□□ -0.16
TCF4-248ENST00000616053 JARID2Q92833 1246 aaPredicted RBP14.02□□□□□ -0.16
TCF4-248ENST00000616053 TEKT1Q969V4 418 aa14.02□□□□□ -0.16
TCF4-248ENST00000616053 SYNJ2BP-COX16A0A087WUM0 186 aa14.02□□□□□ -0.16
TCF4-248ENST00000616053 GNPTABQ3T906 1256 aa14.02□□□□□ -0.16
TCF4-248ENST00000616053 RPAP2Q8IXW5 612 aaPredicted RBP14.02□□□□□ -0.16
TCF4-248ENST00000616053 COX16Q9P0S2 106 aa14.02□□□□□ -0.16
TCF4-248ENST00000616053 LACTBP83111 547 aaPredicted RBP14.02□□□□□ -0.17
TCF4-248ENST00000616053 COG7P83436 770 aa14.02□□□□□ -0.17
TCF4-248ENST00000616053 ALKBH8Q96BT7 664 aaKnown RBP14.02□□□□□ -0.17
TCF4-248ENST00000616053 ALG1Q9BT22 464 aa14.02□□□□□ -0.17
TCF4-248ENST00000616053 SUDS3Q9H7L9 328 aaPredicted RBP14.02□□□□□ -0.17
TCF4-248ENST00000616053 CCNL1Q9UK58 526 aaPredicted RBP14.02□□□□□ -0.17
TCF4-248ENST00000616053 TRIM35Q9UPQ4 493 aa14.02□□□□□ -0.17
TCF4-248ENST00000616053 IGBP1P78318 339 aa14.02□□□□□ -0.17
TCF4-248ENST00000616053 NLRX1Q86UT6 975 aa14.02□□□□□ -0.17
TCF4-248ENST00000616053 CDC26Q8NHZ8 85 aa14.02□□□□□ -0.17
TCF4-248ENST00000616053 EXOC4Q96A65 974 aa14.02□□□□□ -0.17
TCF4-248ENST00000616053 LRRC23Q53EV4 343 aaPredicted RBP14.02□□□□□ -0.17
TCF4-248ENST00000616053 HSP90AA4PQ58FG1 418 aa14.02□□□□□ -0.17
TCF4-248ENST00000616053 NME8Q8N427 588 aa14.02□□□□□ -0.17
TCF4-248ENST00000616053 SLC4A7Q9Y6M7 1214 aa14.02□□□□□ -0.17
TCF4-248ENST00000616053 TMEM247A6NEH6 219 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 EFCAB14O75071 495 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 TNNI1P19237 187 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 CCNA1P78396 465 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 SPAG1Q07617 926 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 DPYDQ12882 1025 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 FOXD4Q12950 439 aaPredicted RBP14.01□□□□□ -0.17
TCF4-248ENST00000616053 SLC12A1Q13621 1099 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 ZBTB8OSQ8IWT0 167 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 DEPTORQ8TB45 409 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 OPTNQ96CV9 577 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 RTL9Q8NET4 1388 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 IFNA8P32881 189 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 DTHD1Q6ZMT9 781 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 RILPQ96NA2 401 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 LUC7L2Q9Y383 392 aaKnown RBP14.01□□□□□ -0.17
TCF4-248ENST00000616053 KLF18A0A0U1RQI7 1052 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 CCDC183Q5T5S1 534 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 WDR64B1ANS9 1081 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 CCDC122Q5T0U0 273 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 MRPL46Q9H2W6 279 aaKnown RBP14.01□□□□□ -0.17
TCF4-248ENST00000616053 CCDC61Q9Y6R9 512 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 LMNB1P20700 586 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 ARHGEF16Q5VV41 709 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 OTUD6AQ7L8S5 288 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 PLIN2Q99541 437 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 SORBS3O60504 671 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 TCP10Q12799 353 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 PRPSAP1Q14558 356 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 USH1GQ495M9 461 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 CXorf38Q8TB03 319 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 SLC12A5Q9H2X9 1139 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 COPRSQ9NQ92 184 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 KRT2P35908 639 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 RECQLP46063 649 aaPredicted RBP14.01□□□□□ -0.17
TCF4-248ENST00000616053 SMAP1Q8IYB5 467 aaPredicted RBP14.01□□□□□ -0.17
TCF4-248ENST00000616053 TEKT4Q8WW24 435 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 MCUR1Q96AQ8 359 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 SBNO2Q9Y2G9 1366 aa14.01□□□□□ -0.17
TCF4-248ENST00000616053 CALUO43852 315 aaPredicted RBP14□□□□□ -0.17
TCF4-248ENST00000616053 MYSM1Q5VVJ2 828 aa14□□□□□ -0.17
TCF4-248ENST00000616053 CEP57Q86XR8 500 aa14□□□□□ -0.17
TCF4-248ENST00000616053 ARHGEF2Q92974 986 aaKnown RBP14□□□□□ -0.17
TCF4-248ENST00000616053 PTPRCP08575 1304 aa14□□□□□ -0.17
TCF4-248ENST00000616053 ATICP31939 592 aa14□□□□□ -0.17
TCF4-248ENST00000616053 GGA1Q9UJY5 639 aa14□□□□□ -0.17
TCF4-248ENST00000616053 CDV3Q9UKY7 258 aaKnown RBP14□□□□□ -0.17
TCF4-248ENST00000616053 FMNL1O95466 1100 aaPredicted RBP14□□□□□ -0.17
TCF4-248ENST00000616053 DCAF15Q66K64 600 aa14□□□□□ -0.17
TCF4-248ENST00000616053 SNW1Q13573 536 aaKnown RBP14□□□□□ -0.17
TCF4-248ENST00000616053 E4F1Q66K89 784 aaPredicted RBP14□□□□□ -0.17
TCF4-248ENST00000616053 LCA5Q86VQ0 697 aa14□□□□□ -0.17
TCF4-248ENST00000616053 TMEM57Q8N5G2 664 aa14□□□□□ -0.17
TCF4-248ENST00000616053 UBL4BQ8N7F7 174 aa14□□□□□ -0.17
TCF4-248ENST00000616053 MBIPQ9NS73 344 aa14□□□□□ -0.17
TCF4-248ENST00000616053 BRD1O95696 1058 aa14□□□□□ -0.17
TCF4-248ENST00000616053 EPHB1P54762 984 aa14□□□□□ -0.17
TCF4-248ENST00000616053 HAUS3Q68CZ6 603 aa14□□□□□ -0.17
TCF4-248ENST00000616053 TPCN1Q9ULQ1 816 aa14□□□□□ -0.17
TCF4-248ENST00000616053 ADAMTS8Q9UP79 889 aa14□□□□□ -0.17
TCF4-248ENST00000616053 PPFIA4O75335 1185 aa14□□□□□ -0.17
TCF4-248ENST00000616053 CCDC26Q8TAB7 109 aa14□□□□□ -0.17
TCF4-248ENST00000616053 XAB2Q9HCS7 855 aaKnown RBP14□□□□□ -0.17
TCF4-248ENST00000616053 ZKSCAN5Q9Y2L8 839 aa14□□□□□ -0.17
TCF4-248ENST00000616053 KRT86O43790 486 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 NUDT18Q6ZVK8 323 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 UBASH3AP57075 661 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 NDUFAF2Q8N183 169 aa13.99□□□□□ -0.17
TCF4-248ENST00000616053 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.99□□□□□ -0.17
TCF4-248ENST00000616053 HESX1Q9UBX0 185 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms