RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 CTAGE8P0CG41 777 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 SCARF1Q14162 830 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 POSTNQ15063 836 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 CPLX2Q6PUV4 134 aaKnown RBP14.98□□□□□ -0.01
MSH6-214ENST00000616033 CTAGE6Q86UF2 777 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 CTAGE4Q8IX94 777 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 NUP88Q99567 741 aaPredicted RBP14.98□□□□□ -0.01
MSH6-214ENST00000616033 EFCC1Q9HA90 598 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 KCND1Q9NSA2 647 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 TUBB4AP04350 444 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 PSEN1P49768 467 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 LIG3P49916 1009 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 BEND6Q5SZJ8 279 aaPredicted RBP14.98□□□□□ -0.01
MSH6-214ENST00000616033 HELLSQ9NRZ9 838 aa14.98□□□□□ -0.01
MSH6-214ENST00000616033 MATR3P43243 847 aaKnown RBP eCLIP14.97□□□□□ -0.01
MSH6-214ENST00000616033 ZAP70P43403 619 aa14.97□□□□□ -0.01
MSH6-214ENST00000616033 RFX5P48382 616 aaPredicted RBP14.97□□□□□ -0.01
MSH6-214ENST00000616033 ANTXR2P58335 489 aa14.97□□□□□ -0.01
MSH6-214ENST00000616033 NR5A1Q13285 461 aa14.97□□□□□ -0.01
MSH6-214ENST00000616033 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.97□□□□□ -0.01
MSH6-214ENST00000616033 FER1L4A9Z1Z3 1794 aa14.97□□□□□ -0.01
MSH6-214ENST00000616033 GOLGA8AA7E2F4 631 aa14.97□□□□□ -0.01
MSH6-214ENST00000616033 SEC31BQ9NQW1 1179 aa14.97□□□□□ -0.01
MSH6-214ENST00000616033 CEMIPQ8WUJ3 1361 aa14.97□□□□□ -0.01
MSH6-214ENST00000616033 PRPF38AQ8NAV1 312 aaKnown RBP14.97□□□□□ -0.01
MSH6-214ENST00000616033 CEP126Q9P2H0 1117 aa14.97□□□□□ -0.01
MSH6-214ENST00000616033 CDC23Q9UJX2 597 aa14.97□□□□□ -0.01
MSH6-214ENST00000616033 GOLGA6L9A6NEM1 432 aa14.96□□□□□ -0.01
MSH6-214ENST00000616033 LRRIQ3A6PVS8 624 aaPredicted RBP14.96□□□□□ -0.01
MSH6-214ENST00000616033 CAGE1Q8TC20 777 aa14.96□□□□□ -0.01
MSH6-214ENST00000616033 GUCY1A2P33402 732 aa14.96□□□□□ -0.01
MSH6-214ENST00000616033 BRD3Q15059 726 aa14.96□□□□□ -0.01
MSH6-214ENST00000616033 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
MSH6-214ENST00000616033 TUBE1Q9UJT0 475 aa14.96□□□□□ -0.01
MSH6-214ENST00000616033 DIP2AQ14689 1571 aa14.96□□□□□ -0.02
MSH6-214ENST00000616033 GPAA1O43292 621 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 MNAT1P51948 309 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 RAPGEF4Q8WZA2 1011 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 PSMB7Q99436 277 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 EHD4Q9H223 541 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 ADGRG1Q9Y653 693 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 ATP8B1O43520 1251 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 RNF40O75150 1001 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 CYB5R4Q7L1T6 521 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 KRI1Q8N9T8 703 aaKnown RBP14.95□□□□□ -0.02
MSH6-214ENST00000616033 SMARCC1Q92922 1105 aaPredicted RBP14.95□□□□□ -0.02
MSH6-214ENST00000616033 BLZF1Q9H2G9 400 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 N4BP3O15049 544 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 A1BGP04217 495 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 IVLP07476 585 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 KCNJ6P48051 423 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 TTLL7Q6ZT98 887 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 CEP112Q8N8E3 955 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 NCAPGQ9BPX3 1015 aa14.95□□□□□ -0.02
MSH6-214ENST00000616033 GEMIN8Q9NWZ8 242 aaKnown RBP14.95□□□□□ -0.02
MSH6-214ENST00000616033 RGPD8O14715 1765 aaPredicted RBP14.95□□□□□ -0.02
MSH6-214ENST00000616033 SH3TC1Q8TE82 1336 aa14.94□□□□□ -0.02
MSH6-214ENST00000616033 ZBTB43O43298 467 aa14.94□□□□□ -0.02
MSH6-214ENST00000616033 DNA2P51530 1060 aa14.94□□□□□ -0.02
MSH6-214ENST00000616033 TMEM67Q5HYA8 995 aa14.94□□□□□ -0.02
MSH6-214ENST00000616033 CABP5Q9NP86 173 aa14.94□□□□□ -0.02
MSH6-214ENST00000616033 PCDHB6Q9Y5E3 794 aa14.94□□□□□ -0.02
MSH6-214ENST00000616033 ARHGAP23Q9P227 1491 aa14.94□□□□□ -0.02
MSH6-214ENST00000616033 TDO2P48775 406 aa14.94□□□□□ -0.02
MSH6-214ENST00000616033 SAFBQ15424 915 aaKnown RBP eCLIP14.94□□□□□ -0.02
MSH6-214ENST00000616033 CTR9Q6PD62 1173 aa14.94□□□□□ -0.02
MSH6-214ENST00000616033 LRRC31Q6UY01 552 aa14.94□□□□□ -0.02
MSH6-214ENST00000616033 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.94□□□□□ -0.02
MSH6-214ENST00000616033 NUTM2AQ8IVF1 878 aaPredicted RBP14.94□□□□□ -0.02
MSH6-214ENST00000616033 DIS3L2Q8IYB7 885 aaKnown RBP14.94□□□□□ -0.02
MSH6-214ENST00000616033 CCT5P48643 541 aa14.94□□□□□ -0.02
MSH6-214ENST00000616033 FXR1P51114 621 aaKnown RBP eCLIP14.94□□□□□ -0.022e-6■■□□□ 13.7
MSH6-214ENST00000616033 CTDSPL2Q05D32 466 aa14.94□□□□□ -0.02
MSH6-214ENST00000616033 TAB2Q9NYJ8 693 aa14.94□□□□□ -0.02
MSH6-214ENST00000616033 PALLDQ8WX93 1383 aa14.93□□□□□ -0.02
MSH6-214ENST00000616033 IFIT3O14879 490 aaKnown RBP14.93□□□□□ -0.02
MSH6-214ENST00000616033 PPP2R5AQ15172 486 aa14.93□□□□□ -0.02
MSH6-214ENST00000616033 EPSTI1Q96J88 318 aa14.93□□□□□ -0.02
MSH6-214ENST00000616033 UBXN6Q9BZV1 441 aa14.93□□□□□ -0.02
MSH6-214ENST00000616033 SAMM50Q9Y512 469 aa14.93□□□□□ -0.02
MSH6-214ENST00000616033 FAM205CA6NFA0 338 aa14.93□□□□□ -0.02
MSH6-214ENST00000616033 AMOTQ4VCS5 1084 aa14.93□□□□□ -0.02
MSH6-214ENST00000616033 RESP18Q5W5W9 173 aa14.93□□□□□ -0.02
MSH6-214ENST00000616033 L1RE1Q9UN81 338 aa14.93□□□□□ -0.02
MSH6-214ENST00000616033 BAZ2BQ9UIF8 2168 aaKnown RBP14.93□□□□□ -0.02
MSH6-214ENST00000616033 CACNA1FO60840 1977 aa14.93□□□□□ -0.02
MSH6-214ENST00000616033 FILIP1LQ4L180 1135 aa14.92□□□□□ -0.02
MSH6-214ENST00000616033 ATG9AQ7Z3C6 839 aa14.92□□□□□ -0.02
MSH6-214ENST00000616033 NAPGQ99747 312 aaPredicted RBP14.92□□□□□ -0.02
MSH6-214ENST00000616033 ANGEL1Q9UNK9 670 aaKnown RBP14.92□□□□□ -0.02
MSH6-214ENST00000616033 CTNND2Q9UQB3 1225 aa14.92□□□□□ -0.02
MSH6-214ENST00000616033 PTPAQ15257 358 aa14.92□□□□□ -0.02
MSH6-214ENST00000616033 TBC1D10CQ8IV04 446 aa14.92□□□□□ -0.02
MSH6-214ENST00000616033 XAGE2Q96GT9 111 aa14.92□□□□□ -0.02
MSH6-214ENST00000616033 MED15Q96RN5 788 aa14.92□□□□□ -0.02
MSH6-214ENST00000616033 MAP2K7O14733 419 aa14.92□□□□□ -0.02
MSH6-214ENST00000616033 CCDC57Q2TAC2 916 aa14.92□□□□□ -0.02
MSH6-214ENST00000616033 MB21D2Q8IYB1 491 aaPredicted RBP14.92□□□□□ -0.02
MSH6-214ENST00000616033 AFAP1L1Q8TED9 768 aa14.92□□□□□ -0.02
MSH6-214ENST00000616033 CRACR2AQ9BSW2 395 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms