RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 RHPN1Q8TCX5 695 aa13.01□□□□□ -0.33
RABGAP1-213ENST00000616002 UPF3BQ9BZI7 483 aaKnown RBP13.01□□□□□ -0.33
RABGAP1-213ENST00000616002 DEFB129Q9H1M3 183 aa13.01□□□□□ -0.33
RABGAP1-213ENST00000616002 R3HDMLQ9H3Y0 253 aa13.01□□□□□ -0.33
RABGAP1-213ENST00000616002 ZSWIM6Q9HCJ5 1215 aa13.01□□□□□ -0.33
RABGAP1-213ENST00000616002 COL1A1P02452 1464 aaPredicted RBP13□□□□□ -0.33
RABGAP1-213ENST00000616002 H7C1W4 665 aa13□□□□□ -0.33
RABGAP1-213ENST00000616002 HIP1O00291 1037 aa13□□□□□ -0.33
RABGAP1-213ENST00000616002 PPP1R12BO60237 982 aaPredicted RBP13□□□□□ -0.33
RABGAP1-213ENST00000616002 ANKRD7Q92527 254 aa13□□□□□ -0.33
RABGAP1-213ENST00000616002 ZBED3Q96IU2 234 aaPredicted RBP13□□□□□ -0.33
RABGAP1-213ENST00000616002 CHAMP1Q96JM3 812 aa13□□□□□ -0.33
RABGAP1-213ENST00000616002 CNPY2Q9Y2B0 182 aa13□□□□□ -0.33
RABGAP1-213ENST00000616002 TRIM17Q9Y577 477 aa13□□□□□ -0.33
RABGAP1-213ENST00000616002 IFNL1Q8IU54 200 aa12.99□□□□□ -0.33
RABGAP1-213ENST00000616002 FAM200AQ8TCP9 573 aa12.99□□□□□ -0.33
RABGAP1-213ENST00000616002 FEZ1Q99689 392 aa12.99□□□□□ -0.33
RABGAP1-213ENST00000616002 FZD1Q9UP38 647 aa12.99□□□□□ -0.33
RABGAP1-213ENST00000616002 MTMR6Q9Y217 621 aa12.99□□□□□ -0.33
RABGAP1-213ENST00000616002 MYO1BO43795 1136 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 KIF20AO95235 890 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 ZBTB48P10074 688 aaPredicted RBP12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 CHRNDQ07001 517 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 GCKRQ14397 625 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 ANKRD1Q15327 319 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 RBM43Q6ZSC3 357 aaKnown RBP12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 ZNF710Q8N1W2 664 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 KRI1Q8N9T8 703 aaKnown RBP12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 PLA2G12BQ9BX93 195 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 CD209Q9NNX6 404 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 PPP2R3BQ9Y5P8 575 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 CYP46A1Q9Y6A2 500 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 MAP3K11Q16584 847 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 SUPT20HL1Q3ZLR7 823 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 SMYD5Q6GMV2 418 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 ERC1Q8IUD2 1116 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 PDCL2Q8N4E4 241 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 WNK4Q96J92 1243 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 CLMNQ96JQ2 1002 aa12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 SCAND2PQ9GZW5 306 aaPredicted RBP12.98□□□□□ -0.33
RABGAP1-213ENST00000616002 ANKRD18BA2A2Z9 1011 aa12.97□□□□□ -0.33
RABGAP1-213ENST00000616002 F8W031 263 aaPredicted RBP12.97□□□□□ -0.33
RABGAP1-213ENST00000616002 SURF6O75683 361 aaKnown RBP12.97□□□□□ -0.33
RABGAP1-213ENST00000616002 CSF1RP07333 972 aa12.97□□□□□ -0.33
RABGAP1-213ENST00000616002 ZSCAN20P17040 1043 aaPredicted RBP12.97□□□□□ -0.33
RABGAP1-213ENST00000616002 PSMA5P28066 241 aa12.97□□□□□ -0.33
RABGAP1-213ENST00000616002 OTUD7BQ6GQQ9 843 aa12.97□□□□□ -0.33
RABGAP1-213ENST00000616002 OTOP1Q7RTM1 612 aa12.97□□□□□ -0.33
RABGAP1-213ENST00000616002 MTMR14Q8NCE2 650 aa12.97□□□□□ -0.33
RABGAP1-213ENST00000616002 GPATCH3Q96I76 525 aa12.97□□□□□ -0.33
RABGAP1-213ENST00000616002 GDPD2Q9HCC8 539 aa12.97□□□□□ -0.33
RABGAP1-213ENST00000616002 DDX19AQ9NUU7 478 aaKnown RBP12.97□□□□□ -0.33
RABGAP1-213ENST00000616002 CLRN2A0PK11 232 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 UNCXA6NJT0 531 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 IGF2BP3O00425 579 aaKnown RBP eCLIP12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 CDC25BP30305 580 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 IREB2P48200 963 aaKnown RBP12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 KRT85P78386 507 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 PDE4DQ08499 809 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 NECTIN1Q15223 517 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 TSHZ3Q63HK5 1081 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 ZNF804AQ7Z570 1209 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 RASEFQ8IZ41 740 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 CERS5Q8N5B7 392 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 ERO1AQ96HE7 468 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 TTC12Q9H892 705 aaPredicted RBP12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 VEZTQ9HBM0 779 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 PDRG1Q9NUG6 133 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 PAXBP1Q9Y5B6 917 aa12.96□□□□□ -0.33
RABGAP1-213ENST00000616002 TAF5LO75529 589 aa12.95□□□□□ -0.34
RABGAP1-213ENST00000616002 ZKSCAN1P17029 563 aaPredicted RBP12.95□□□□□ -0.34
RABGAP1-213ENST00000616002 GJB2P29033 226 aa12.95□□□□□ -0.34
RABGAP1-213ENST00000616002 TSGA10IPQ3SY00 556 aa12.95□□□□□ -0.34
RABGAP1-213ENST00000616002 CFAP100Q494V2 611 aa12.95□□□□□ -0.34
RABGAP1-213ENST00000616002 HELBQ8NG08 1087 aaPredicted RBP12.95□□□□□ -0.34
RABGAP1-213ENST00000616002 LINS1Q8NG48 757 aa12.95□□□□□ -0.34
RABGAP1-213ENST00000616002 DNAAF4Q8WXU2 420 aa12.95□□□□□ -0.34
RABGAP1-213ENST00000616002 EVI5LQ96CN4 794 aa12.95□□□□□ -0.34
RABGAP1-213ENST00000616002 IL25Q9H293 177 aa12.95□□□□□ -0.34
RABGAP1-213ENST00000616002 SSC5DA1L4H1 1573 aa12.95□□□□□ -0.34
RABGAP1-213ENST00000616002 ECM29Q5VYK3 1845 aa12.95□□□□□ -0.34
RABGAP1-213ENST00000616002 POTEFA5A3E0 1075 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 SPDYE2BA6NHP3 402 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 SNAP23O00161 211 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 NEMFO60524 1076 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 ALDH1L1O75891 902 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 SPDYE6P0CI01 402 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 RBM5P52756 815 aaKnown RBP eCLIP12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 CASP7P55210 303 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 IFIT5Q13325 482 aaKnown RBP12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 C15orf52Q6ZUT6 534 aaKnown RBP12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 PRMT6Q96LA8 375 aaPredicted RBP12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 CHMP3Q9Y3E7 222 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 PCDHAC2Q9Y5I4 1007 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 IL1R1P14778 569 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 CASTP20810 708 aaKnown RBP12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 FAM193AP78312 1265 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 CRHR2Q13324 411 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 BEND3Q5T5X7 828 aa12.94□□□□□ -0.34
RABGAP1-213ENST00000616002 NBPF12Q5TAG4 269 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms