RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	ATP6V0A2	Q9Y487	856 aa		11.07	□□□□□ -0.64
LRTOMT-222	ENST00000615940	ZSCAN9	O15535	394 aa	Predicted RBP	11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	KCNQ3	O43525	872 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	ZBED6	P86452	979 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	RBBP5	Q15291	538 aa	Known RBP	11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	KIF4B	Q2VIQ3	1234 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	TTC19	Q6DKK2	380 aa	Predicted RBP	11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	NUTM1	Q86Y26	1132 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	CCDC65	Q8IXS2	484 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	HELQ	Q8TDG4	1101 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	PPM1E	Q8WY54	764 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	SLC39A13	Q96H72	371 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	SLC7A5P2	Q9GIP4	190 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	CLIC5	Q9NZA1	410 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	PCSK1N	Q9UHG2	260 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	HDAC9	Q9UKV0	1011 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	MKL2	Q9ULH7	1088 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	NUP188	Q5SRE5	1749 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	C5	P01031	1676 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	TUBGCP6	Q96RT7	1819 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	RGS20	O76081	388 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	FOS	P01100	380 aa	Predicted RBP	11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	VIL1	P09327	827 aa	Known RBP	11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	PSMA3	P25788	255 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	ERCC5	P28715	1186 aa	Predicted RBP	11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	PACS1	Q6VY07	963 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	ATG3	Q9NT62	314 aa		11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.06	□□□□□ -0.64
LRTOMT-222	ENST00000615940	TJP1	Q07157	1748 aa		11.05	□□□□□ -0.64
LRTOMT-222	ENST00000615940	FMNL1	O95466	1100 aa	Predicted RBP	11.05	□□□□□ -0.64
LRTOMT-222	ENST00000615940	EZH2	Q15910	746 aa	Known RBP	11.05	□□□□□ -0.64
LRTOMT-222	ENST00000615940	ALKBH2	Q6NS38	261 aa		11.05	□□□□□ -0.64
LRTOMT-222	ENST00000615940	DAAM2	Q86T65	1068 aa		11.05	□□□□□ -0.64
LRTOMT-222	ENST00000615940	APPL2	Q8NEU8	664 aa		11.05	□□□□□ -0.64
LRTOMT-222	ENST00000615940	COL5A3	P25940	1745 aa	Predicted RBP	11.05	□□□□□ -0.64
LRTOMT-222	ENST00000615940		A0A1B0GUL7	405 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940		A0A1W2PRQ8	180 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	PTCD1	O75127	700 aa	Known RBP	11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	HOXC13	P31276	330 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	RDX	P35241	583 aa	Known RBP	11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	WTAP	Q15007	396 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	RNF187	Q5TA31	235 aa	Predicted RBP	11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	RC3H1	Q5TC82	1133 aa	Known RBP	11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	RNF20	Q5VTR2	975 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	LRRC49	Q8IUZ0	686 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	NBPF15	Q8N660	670 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	SLC43A3	Q8NBI5	491 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	PALLD	Q8WX93	1383 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	KCP	Q6ZWJ8	1503 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	BTBD11	A6QL63	1104 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	TBC1D12	O60347	775 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	PRPH	P41219	470 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	BAG6	P46379	1132 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	NUCB2	P80303	420 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	SLMAP	Q14BN4	828 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	DBN1	Q16643	649 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	NOM1	Q5C9Z4	860 aa	Known RBP	11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	ANKRD18A	Q8IVF6	992 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	TBC1D31	Q96DN5	1066 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	FAXDC2	Q96IV6	333 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	TANGO6	Q9C0B7	1094 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	CFAP45	Q9UL16	551 aa		11.04	□□□□□ -0.64
LRTOMT-222	ENST00000615940	SOCS7	O14512	581 aa		11.03	□□□□□ -0.64
LRTOMT-222	ENST00000615940	SGTA	O43765	313 aa		11.03	□□□□□ -0.64
LRTOMT-222	ENST00000615940	C21orf2	O43822	256 aa		11.03	□□□□□ -0.64
LRTOMT-222	ENST00000615940	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.03	□□□□□ -0.64
LRTOMT-222	ENST00000615940	POSTN	Q15063	836 aa		11.03	□□□□□ -0.64
LRTOMT-222	ENST00000615940	LEKR1	Q6ZMV7	388 aa		11.03	□□□□□ -0.64
LRTOMT-222	ENST00000615940	SLC4A9	Q96Q91	983 aa		11.03	□□□□□ -0.64
LRTOMT-222	ENST00000615940	CAMKK2	Q96RR4	588 aa		11.03	□□□□□ -0.64
LRTOMT-222	ENST00000615940	RBM42	Q9BTD8	480 aa	Known RBP	11.03	□□□□□ -0.64
LRTOMT-222	ENST00000615940	DIAPH3	Q9NSV4	1193 aa		11.03	□□□□□ -0.64
LRTOMT-222	ENST00000615940	LRRC4B	Q9NT99	713 aa		11.03	□□□□□ -0.64
LRTOMT-222	ENST00000615940	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.03	□□□□□ -0.64
LRTOMT-222	ENST00000615940	BIN2	Q9UBW5	565 aa	Predicted RBP	11.03	□□□□□ -0.64
LRTOMT-222	ENST00000615940	TERF2	Q15554	542 aa		11.02	□□□□□ -0.64
LRTOMT-222	ENST00000615940	MUM1	Q2TAK8	710 aa		11.02	□□□□□ -0.64
LRTOMT-222	ENST00000615940	NAIF1	Q69YI7	327 aa	Predicted RBP	11.02	□□□□□ -0.64
LRTOMT-222	ENST00000615940	ZNF790	Q6PG37	636 aa		11.02	□□□□□ -0.64
LRTOMT-222	ENST00000615940	C11orf74	Q86VG3	221 aa		11.02	□□□□□ -0.64
LRTOMT-222	ENST00000615940	SPATS2	Q86XZ4	545 aa	Known RBP	11.02	□□□□□ -0.64
LRTOMT-222	ENST00000615940	N4BP2L2	Q92802	583 aa	Predicted RBP	11.02	□□□□□ -0.64
LRTOMT-222	ENST00000615940	ZBTB10	Q96DT7	871 aa		11.02	□□□□□ -0.64
LRTOMT-222	ENST00000615940	ZNF496	Q96IT1	587 aa	Predicted RBP	11.02	□□□□□ -0.64
LRTOMT-222	ENST00000615940	PAWR	Q96IZ0	340 aa	Known RBP	11.02	□□□□□ -0.64
LRTOMT-222	ENST00000615940	TMEM87B	Q96K49	555 aa		11.02	□□□□□ -0.64
LRTOMT-222	ENST00000615940	SRCAP	Q6ZRS2	3230 aa		11.02	□□□□□ -0.65
LRTOMT-222	ENST00000615940	PLSCR1	O15162	318 aa		11.02	□□□□□ -0.65
LRTOMT-222	ENST00000615940	CYP11B2	P19099	503 aa		11.02	□□□□□ -0.65
LRTOMT-222	ENST00000615940	CCNC	P24863	283 aa		11.02	□□□□□ -0.65
LRTOMT-222	ENST00000615940	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.02	□□□□□ -0.65
LRTOMT-222	ENST00000615940	PDE4B	Q07343	736 aa		11.02	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TXNRD1	Q16881	649 aa		11.02	□□□□□ -0.65
LRTOMT-222	ENST00000615940	HS1BP3	Q53T59	392 aa		11.02	□□□□□ -0.65
LRTOMT-222	ENST00000615940	AKNAD1	Q5T1N1	836 aa		11.02	□□□□□ -0.65
LRTOMT-222	ENST00000615940	FAM163A	Q96GL9	167 aa	Predicted RBP	11.02	□□□□□ -0.65
LRTOMT-222	ENST00000615940	TMX1	Q9H3N1	280 aa		11.02	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms