RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 XRCC5P13010 732 aaKnown RBP8.74□□□□□ -1.01
MUC1-227ENST00000615517 GCLCP48506 637 aaPredicted RBP8.74□□□□□ -1.01
MUC1-227ENST00000615517 EPHB4P54760 987 aa8.74□□□□□ -1.01
MUC1-227ENST00000615517 MAP3K10Q02779 954 aa8.74□□□□□ -1.01
MUC1-227ENST00000615517 PDE3AQ14432 1141 aa8.74□□□□□ -1.01
MUC1-227ENST00000615517 SH3RF1Q7Z6J0 888 aa8.74□□□□□ -1.01
MUC1-227ENST00000615517 ALYREFQ86V81 257 aaKnown RBP8.74□□□□□ -1.01
MUC1-227ENST00000615517 USP6NLQ92738 828 aa8.74□□□□□ -1.01
MUC1-227ENST00000615517 RUNDC1Q96C34 613 aa8.74□□□□□ -1.01
MUC1-227ENST00000615517 IFT57Q9NWB7 429 aa8.74□□□□□ -1.01
MUC1-227ENST00000615517 MORF4L1Q9UBU8 362 aa8.74□□□□□ -1.01
MUC1-227ENST00000615517 PRKAG2Q9UGJ0 569 aa8.74□□□□□ -1.01
MUC1-227ENST00000615517 PNMA3Q9UL41 463 aa8.74□□□□□ -1.01
MUC1-227ENST00000615517 MAST3O60307 1309 aa8.74□□□□□ -1.01
MUC1-227ENST00000615517 CACNA1AO00555 2505 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 TRIM43BA6NCK2 446 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 ZKSCAN1P17029 563 aaPredicted RBP8.73□□□□□ -1.01
MUC1-227ENST00000615517 ITGB8P26012 769 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 MRPS5P82675 430 aaKnown RBP8.73□□□□□ -1.01
MUC1-227ENST00000615517 DIXDC1Q155Q3 683 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 CCDC57Q2TAC2 916 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 PROCA1Q8NCQ7 364 aaPredicted RBP8.73□□□□□ -1.01
MUC1-227ENST00000615517 LINS1Q8NG48 757 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 TRIM43Q96BQ3 446 aaPredicted RBP8.73□□□□□ -1.01
MUC1-227ENST00000615517 NUDT12Q9BQG2 462 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 ASCC2Q9H1I8 757 aaPredicted RBP8.73□□□□□ -1.01
MUC1-227ENST00000615517 ZNF576Q9H609 170 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 EPHX3Q9H6B9 360 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 MYH16Q9H6N6 1097 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 TXNRD2Q9NNW7 524 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 ATP11BQ9Y2G3 1177 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 SUGT1Q9Y2Z0 365 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 HCN4Q9Y3Q4 1203 aa8.73□□□□□ -1.01
MUC1-227ENST00000615517 PRRC2BQ5JSZ5 2229 aaKnown RBP8.72□□□□□ -1.01
MUC1-227ENST00000615517 DDTLA6NHG4 134 aaPredicted RBP8.72□□□□□ -1.01
MUC1-227ENST00000615517 CTNND1O60716 968 aaKnown RBP8.72□□□□□ -1.01
MUC1-227ENST00000615517 FRAT2O75474 233 aaPredicted RBP8.72□□□□□ -1.01
MUC1-227ENST00000615517 DNAJB2P25686 324 aa8.72□□□□□ -1.01
MUC1-227ENST00000615517 GNAI1P63096 354 aa8.72□□□□□ -1.01
MUC1-227ENST00000615517 TAF7LQ5H9L4 462 aa8.72□□□□□ -1.01
MUC1-227ENST00000615517 SLC39A5Q6ZMH5 540 aa8.72□□□□□ -1.01
MUC1-227ENST00000615517 VPS37DQ86XT2 251 aa8.72□□□□□ -1.01
MUC1-227ENST00000615517 DNAAF4Q8WXU2 420 aa8.72□□□□□ -1.01
MUC1-227ENST00000615517 PRDM5Q9NQX1 630 aaPredicted RBP8.72□□□□□ -1.01
MUC1-227ENST00000615517 PDLIM7Q9NR12 457 aa8.72□□□□□ -1.01
MUC1-227ENST00000615517 USP40Q9NVE5 1235 aa8.72□□□□□ -1.01
MUC1-227ENST00000615517 FLRT1Q9NZU1 646 aa8.72□□□□□ -1.01
MUC1-227ENST00000615517 BRWD1Q9NSI6 2320 aa8.72□□□□□ -1.01
MUC1-227ENST00000615517 RFX7Q2KHR2 1363 aa8.72□□□□□ -1.01
MUC1-227ENST00000615517 ZNFX1Q9P2E3 1918 aaKnown RBP8.72□□□□□ -1.01
MUC1-227ENST00000615517 TRANK1O15050 2925 aa8.71□□□□□ -1.01
MUC1-227ENST00000615517 CDK5RAP2Q96SN8 1893 aa8.71□□□□□ -1.01
MUC1-227ENST00000615517 BMP1P13497 986 aa8.71□□□□□ -1.02
MUC1-227ENST00000615517 RGS3P49796 1198 aa8.71□□□□□ -1.02
MUC1-227ENST00000615517 HMGCS2P54868 508 aa8.71□□□□□ -1.02
MUC1-227ENST00000615517 SPP2Q13103 211 aa8.71□□□□□ -1.02
MUC1-227ENST00000615517 ADGRE1Q14246 886 aa8.71□□□□□ -1.02
MUC1-227ENST00000615517 CCDC85BQ15834 202 aaPredicted RBP8.71□□□□□ -1.02
MUC1-227ENST00000615517 Q3C1V9 767 aa8.71□□□□□ -1.02
MUC1-227ENST00000615517 TRIM60Q495X7 471 aa8.71□□□□□ -1.02
MUC1-227ENST00000615517 MORN1Q5T089 497 aa8.71□□□□□ -1.02
MUC1-227ENST00000615517 AKNAD1Q5T1N1 836 aa8.71□□□□□ -1.02
MUC1-227ENST00000615517 TRMT44Q8IYL2 757 aaKnown RBP8.71□□□□□ -1.02
MUC1-227ENST00000615517 SOCS4Q8WXH5 440 aa8.71□□□□□ -1.02
MUC1-227ENST00000615517 RNPC3Q96LT9 517 aaKnown RBP8.71□□□□□ -1.02
MUC1-227ENST00000615517 PRDM12Q9H4Q4 367 aa8.71□□□□□ -1.02
MUC1-227ENST00000615517 LRRFIP2Q9Y608 721 aaKnown RBP8.71□□□□□ -1.02
MUC1-227ENST00000615517 SIPA1L1O43166 1804 aa8.7□□□□□ -1.02
MUC1-227ENST00000615517 DNM1LO00429 736 aa8.7□□□□□ -1.02
MUC1-227ENST00000615517 FLIIQ13045 1269 aa8.7□□□□□ -1.02
MUC1-227ENST00000615517 SNX17Q15036 470 aa8.7□□□□□ -1.02
MUC1-227ENST00000615517 CAVIN4Q5BKX8 364 aa8.7□□□□□ -1.02
MUC1-227ENST00000615517 GJC2Q5T442 439 aaPredicted RBP8.7□□□□□ -1.02
MUC1-227ENST00000615517 GPR142Q7Z601 462 aa8.7□□□□□ -1.02
MUC1-227ENST00000615517 VGLL2Q8N8G2 317 aa8.7□□□□□ -1.02
MUC1-227ENST00000615517 TRPV1Q8NER1 839 aa8.7□□□□□ -1.02
MUC1-227ENST00000615517 LPAR1Q92633 364 aa8.7□□□□□ -1.02
MUC1-227ENST00000615517 P2RX7Q99572 595 aaKnown RBP8.7□□□□□ -1.02
MUC1-227ENST00000615517 IDI2Q9BXS1 227 aa8.7□□□□□ -1.02
MUC1-227ENST00000615517 STK31Q9BXU1 1019 aa8.7□□□□□ -1.02
MUC1-227ENST00000615517 PORCNQ9H237 461 aa8.7□□□□□ -1.02
MUC1-227ENST00000615517 C11orf16Q9NQ32 467 aa8.7□□□□□ -1.02
MUC1-227ENST00000615517 DDX4Q9NQI0 724 aaKnown RBP8.7□□□□□ -1.02
MUC1-227ENST00000615517 DDX20Q9UHI6 824 aaKnown RBP8.7□□□□□ -1.02
MUC1-227ENST00000615517 LRRC37A2A6NM11 1700 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.69□□□□□ -1.02
MUC1-227ENST00000615517 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.69□□□□□ -1.02
MUC1-227ENST00000615517 FAM196BA6NMK8 535 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 ENTPD3O75355 529 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 PRDX5P30044 214 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 RGS2P41220 211 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 RRP1BQ14684 758 aaKnown RBP8.69□□□□□ -1.02
MUC1-227ENST00000615517 LRRC24Q50LG9 513 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 SH3D19Q5HYK7 790 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 ZNF280CQ8ND82 737 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 GPRC5AQ8NFJ5 357 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 TIFAQ96CG3 184 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 KAZALD1Q96I82 304 aa8.69□□□□□ -1.02
MUC1-227ENST00000615517 GAS2L1Q99501 681 aaPredicted RBP8.69□□□□□ -1.02
MUC1-227ENST00000615517 APBA2Q99767 749 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms