RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 MICALCLQ6ZW33 695 aa11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 PCDHA5Q9Y5H7 936 aa11.74□□□□□ -0.53
TNFAIP3-208ENST00000615468 TAF5LO75529 589 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 SPECC1Q5M775 1068 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 SND1Q7KZF4 910 aaKnown RBP eCLIP11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 ZKSCAN4Q969J2 545 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 CALR3Q96L12 384 aaKnown RBP11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 CHPF2Q9P2E5 772 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 MATR3P43243 847 aaKnown RBP eCLIP11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 STX17P56962 302 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 ANO1Q5XXA6 986 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 KCTD16Q68DU8 428 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 TOM1L2Q6ZVM7 507 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 CEP120Q8N960 986 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 COG1Q8WTW3 980 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 ZNF335Q9H4Z2 1342 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 RBM28Q9NW13 759 aaKnown RBP11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 SLIT1O75093 1534 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 EVA1CP58658 441 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 TUBB2AQ13885 445 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 MYSM1Q5VVJ2 828 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 TEX11Q8IYF3 940 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 EAF2Q96CJ1 260 aaPredicted RBP11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 SLF1Q9BQI6 1058 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 TUBB2BQ9BVA1 445 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 KLC4Q9NSK0 619 aa11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 TLR7Q9NYK1 1049 aaKnown RBP11.73□□□□□ -0.53
TNFAIP3-208ENST00000615468 CYP21A2P08686 494 aa11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 DHX32Q7L7V1 743 aaKnown RBP11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 INTS13Q9NVM9 706 aa11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 U3KPZ7 1027 aaPredicted RBP11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 SETD1AO15047 1707 aaKnown RBP11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 USP31Q70CQ4 1352 aa11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 CMA1P23946 247 aa11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 ARHGAP25P42331 645 aa11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 RBL2Q08999 1139 aa11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 IFT88Q13099 833 aa11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 JMYQ8N9B5 988 aa11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 PRPF38AQ8NAV1 312 aaKnown RBP11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 SMARCC2Q8TAQ2 1214 aa11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 HSD3B7Q9H2F3 369 aa11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 SAMSN1Q9NSI8 373 aaKnown RBP11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 EIF3HO15372 352 aaKnown RBP eCLIP11.72□□□□□ -0.532e-7■■■□□ 18.4
TNFAIP3-208ENST00000615468 CTDNEP1O95476 244 aa11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 GCFC2P16383 781 aaKnown RBP11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 FILIP1LQ4L180 1135 aa11.72□□□□□ -0.53
TNFAIP3-208ENST00000615468 ARHGEF10O15013 1369 aa11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 SRGAP2O75044 1071 aa11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 YEATS4O95619 227 aa11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 CHGBP05060 677 aa11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 MRPS25P82663 173 aaKnown RBP11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 CCDC40Q4G0X9 1142 aa11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 ILDR1Q86SU0 546 aaPredicted RBP11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 NUP88Q99567 741 aaPredicted RBP11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 SELENOOQ9BVL4 669 aa11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 HDAC6Q9UBN7 1215 aa11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 GOLGA6L7A0A1B0GV03 622 aa11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 PRPF6O94906 941 aaKnown RBP11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 PDE4BQ07343 736 aa11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 CADPS2Q86UW7 1296 aa11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 ARHGEF25Q86VW2 580 aa11.71□□□□□ -0.53
TNFAIP3-208ENST00000615468 MEFVO15553 781 aaPredicted RBP11.71□□□□□ -0.54
TNFAIP3-208ENST00000615468 TEX33O43247 280 aa11.71□□□□□ -0.54
TNFAIP3-208ENST00000615468 PPP1R12BO60237 982 aaPredicted RBP11.71□□□□□ -0.54
TNFAIP3-208ENST00000615468 TATP17735 454 aaPredicted RBP11.71□□□□□ -0.54
TNFAIP3-208ENST00000615468 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.71□□□□□ -0.54
TNFAIP3-208ENST00000615468 NUTM2AQ8IVF1 878 aaPredicted RBP11.71□□□□□ -0.54
TNFAIP3-208ENST00000615468 VIPAS39Q9H9C1 493 aa11.71□□□□□ -0.54
TNFAIP3-208ENST00000615468 TTF2Q9UNY4 1162 aaKnown RBP11.71□□□□□ -0.54
TNFAIP3-208ENST00000615468 RGPD8O14715 1765 aaPredicted RBP11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 ABL1P00519 1130 aa11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 CASP14P31944 242 aa11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 SF3B2Q13435 895 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 MSL3Q8N5Y2 521 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 KLHDC4Q8TBB5 520 aa11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 STAG1Q8WVM7 1258 aa11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 FOXN1O15353 648 aa11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 OPA1O60313 960 aa11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 PTCD1O75127 700 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 A1BGP04217 495 aa11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 USP14P54578 494 aa11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 AP1ARQ63HQ0 302 aa11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 DDX46Q7L014 1031 aaKnown RBP11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 ALDH8A1Q9H2A2 487 aaPredicted RBP11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 JADE2Q9NQC1 790 aa11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 DACH1Q9UI36 760 aa11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 ITSN1Q15811 1721 aa11.7□□□□□ -0.54
TNFAIP3-208ENST00000615468 MPHOSPH10O00566 681 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-208ENST00000615468 HMGB1P09429 215 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-208ENST00000615468 SNCBQ16143 134 aa11.69□□□□□ -0.54
TNFAIP3-208ENST00000615468 CCDC121Q6ZUS5 278 aa11.69□□□□□ -0.54
TNFAIP3-208ENST00000615468 CARMIL3Q8ND23 1372 aa11.69□□□□□ -0.54
TNFAIP3-208ENST00000615468 AARSP49588 968 aaKnown RBP eCLIP11.69□□□□□ -0.54
TNFAIP3-208ENST00000615468 TACO1Q9BSH4 297 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-208ENST00000615468 POLR3EQ9NVU0 708 aa11.69□□□□□ -0.54
TNFAIP3-208ENST00000615468 ALDH1L1O75891 902 aa11.69□□□□□ -0.54
TNFAIP3-208ENST00000615468 CDC27P30260 824 aa11.69□□□□□ -0.54
TNFAIP3-208ENST00000615468 CCT6AP40227 531 aaKnown RBP11.69□□□□□ -0.54
TNFAIP3-208ENST00000615468 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms