RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 SDR42E1Q8WUS8 393 aa14.26□□□□□ -0.13
MSH6-213ENST00000614496 CCDC194A0A1B0GVG4 234 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 CIAO1O76071 339 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 TRIM47Q96LD4 638 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 DRC1Q96MC2 740 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 ZSWIM5Q9P217 1185 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 SYNRGQ9UMZ2 1314 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 CASP1P29466 404 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 ADD2P35612 726 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 PDE4CQ08493 712 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 PUM3Q15397 648 aaKnown RBP14.25□□□□□ -0.13
MSH6-213ENST00000614496 BBXQ8WY36 941 aaPredicted RBP14.25□□□□□ -0.13
MSH6-213ENST00000614496 TAB2Q9NYJ8 693 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 SH2B2O14492 632 aaPredicted RBP14.25□□□□□ -0.13
MSH6-213ENST00000614496 UBA7P41226 1012 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 SMC1AQ14683 1233 aaKnown RBP14.25□□□□□ -0.13
MSH6-213ENST00000614496 SHC4Q6S5L8 630 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 ACSBG1Q96GR2 724 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 CDK5RAP3Q96JB5 506 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 CRACR2AQ9BSW2 395 aa14.25□□□□□ -0.13
MSH6-213ENST00000614496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.25□□□□□ -0.135e-7■■■□□ 15
MSH6-213ENST00000614496 MAGEB6P1A0A0J9YX57 407 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 SSBP05455 408 aaKnown RBP eCLIP14.24□□□□□ -0.13
MSH6-213ENST00000614496 UBXN1Q04323 297 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 ENOX2Q16206 610 aaKnown RBP14.24□□□□□ -0.13
MSH6-213ENST00000614496 VSTM4Q8IW00 320 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 ZBTB38Q8NAP3 1195 aaPredicted RBP14.24□□□□□ -0.13
MSH6-213ENST00000614496 CTAGE1Q96RT6 745 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 GBP3Q9H0R5 595 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 SENP2Q9HC62 589 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 MAN1B1Q9UKM7 699 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 HEG1Q9ULI3 1381 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 PEAK1Q9H792 1746 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 PATL2C9JE40 543 aaKnown RBP14.24□□□□□ -0.13
MSH6-213ENST00000614496 NOM1Q5C9Z4 860 aaKnown RBP14.24□□□□□ -0.13
MSH6-213ENST00000614496 CCDC181Q5TID7 509 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 ZNF654Q8IZM8 581 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 TXLNBQ8N3L3 684 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 EEF2KMTQ96G04 330 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 PNMA6AP0CW24 399 aaPredicted RBP14.24□□□□□ -0.13
MSH6-213ENST00000614496 CAPN2P17655 700 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 STAT6P42226 847 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 MTIF2P46199 727 aaKnown RBP14.24□□□□□ -0.13
MSH6-213ENST00000614496 CTSWP56202 376 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 SLF1Q9BQI6 1058 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 MKNK2Q9HBH9 465 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 PCDHB6Q9Y5E3 794 aa14.24□□□□□ -0.13
MSH6-213ENST00000614496 UBE2Q2LH0YL09 131 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 PPP6R2O75170 966 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 PCCAP05165 728 aaPredicted RBP14.23□□□□□ -0.13
MSH6-213ENST00000614496 BCAMP50895 628 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 NYAP1Q6ZVC0 841 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 LPIN2Q92539 896 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 CSRNP2Q9H175 543 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 VAT1LQ9HCJ6 419 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 ZCCHC17Q9NP64 241 aaKnown RBP14.23□□□□□ -0.13
MSH6-213ENST00000614496 JADE2Q9NQC1 790 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 MORC2Q9Y6X9 1032 aaPredicted RBP14.23□□□□□ -0.13
MSH6-213ENST00000614496 C3P01024 1663 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 EFCAB8A8MWE9 144 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 PIK3AP1Q6ZUJ8 805 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 CEP112Q8N8E3 955 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 COL15A1P39059 1388 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 PDE8AO60658 829 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 TRIM21P19474 475 aaKnown RBP14.23□□□□□ -0.13
MSH6-213ENST00000614496 ANTXR2P58335 489 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 ZHX3Q9H4I2 956 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 EXOC5O00471 708 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 PDE8BO95263 885 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 USP5P45974 858 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 GYS2P54840 703 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 GDAP1L1Q96MZ0 367 aa14.23□□□□□ -0.13
MSH6-213ENST00000614496 NIP7Q9Y221 180 aaKnown RBP eCLIP14.23□□□□□ -0.13
MSH6-213ENST00000614496 SOWAHDA6NJG2 315 aa14.22□□□□□ -0.13
MSH6-213ENST00000614496 MROH7-TTC4A0A0A0MT08 1334 aa14.22□□□□□ -0.13
MSH6-213ENST00000614496 ADGRL3Q9HAR2 1447 aa14.22□□□□□ -0.13
MSH6-213ENST00000614496 KRT9P35527 623 aa14.22□□□□□ -0.13
MSH6-213ENST00000614496 CCDC152Q4G0S7 254 aa14.22□□□□□ -0.13
MSH6-213ENST00000614496 TOGARAM2Q6ZUX3 1019 aa14.22□□□□□ -0.13
MSH6-213ENST00000614496 C10orf67Q8IYJ2 551 aa14.22□□□□□ -0.13
MSH6-213ENST00000614496 FANCBQ8NB91 859 aa14.22□□□□□ -0.13
MSH6-213ENST00000614496 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.22□□□□□ -0.13
MSH6-213ENST00000614496 ERVV-2B6SEH9 535 aa14.22□□□□□ -0.13
MSH6-213ENST00000614496 PRR29P0C7W0 189 aa14.22□□□□□ -0.13
MSH6-213ENST00000614496 ILDR1Q86SU0 546 aaPredicted RBP14.22□□□□□ -0.13
MSH6-213ENST00000614496 IQUBQ8NA54 791 aa14.22□□□□□ -0.13
MSH6-213ENST00000614496 STX8Q9UNK0 236 aa14.22□□□□□ -0.13
MSH6-213ENST00000614496 NEDD4P46934 1319 aa14.21□□□□□ -0.13
MSH6-213ENST00000614496 MON2Q7Z3U7 1717 aa14.21□□□□□ -0.13
MSH6-213ENST00000614496 HSPA2P54652 639 aa14.21□□□□□ -0.13
MSH6-213ENST00000614496 HLFQ16534 295 aa14.21□□□□□ -0.13
MSH6-213ENST00000614496 CNGA4Q8IV77 575 aa14.21□□□□□ -0.13
MSH6-213ENST00000614496 LRRN4CLQ8ND94 238 aa14.21□□□□□ -0.13
MSH6-213ENST00000614496 PALLDQ8WX93 1383 aa14.21□□□□□ -0.13
MSH6-213ENST00000614496 ATP2B2Q01814 1243 aa14.21□□□□□ -0.13
MSH6-213ENST00000614496 SPA17Q15506 151 aa14.21□□□□□ -0.13
MSH6-213ENST00000614496 CCDC178Q5BJE1 867 aa14.21□□□□□ -0.13
MSH6-213ENST00000614496 GPR161Q8N6U8 529 aaKnown RBP14.21□□□□□ -0.13
MSH6-213ENST00000614496 HINFPQ9BQA5 517 aa14.21□□□□□ -0.13
MSH6-213ENST00000614496 IRX2Q9BZI1 471 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms