RNA–Protein interactions for RNA: ENST00000614090.1

PTPN20CP-201, Transcript of protein tyrosine phosphatase, non-receptor type 20C, pseudogene, humanhuman

BASIC

Gene PTPN20CP, Length 920 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20CP-201ENST00000614090 USP38Q8NB14 1042 aa15.82■□□□□ 0.12
PTPN20CP-201ENST00000614090 IDI2Q9BXS1 227 aa15.82■□□□□ 0.12
PTPN20CP-201ENST00000614090 SENP6Q9GZR1 1112 aaPredicted RBP15.82■□□□□ 0.12
PTPN20CP-201ENST00000614090 ASCC2Q9H1I8 757 aaPredicted RBP15.82■□□□□ 0.12
PTPN20CP-201ENST00000614090 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.82■□□□□ 0.12
PTPN20CP-201ENST00000614090 PDE8BO95263 885 aa15.81■□□□□ 0.12
PTPN20CP-201ENST00000614090 ZEB1P37275 1124 aaPredicted RBP15.81■□□□□ 0.12
PTPN20CP-201ENST00000614090 CCDC84Q86UT8 332 aaPredicted RBP15.81■□□□□ 0.12
PTPN20CP-201ENST00000614090 PRDX5P30044 214 aa15.8■□□□□ 0.12
PTPN20CP-201ENST00000614090 RTP1P59025 263 aa15.8■□□□□ 0.12
PTPN20CP-201ENST00000614090 PDE3AQ14432 1141 aa15.8■□□□□ 0.12
PTPN20CP-201ENST00000614090 SH3BP5LQ7L8J4 393 aa15.8■□□□□ 0.12
PTPN20CP-201ENST00000614090 ZSCAN29Q8IWY8 852 aaPredicted RBP15.8■□□□□ 0.12
PTPN20CP-201ENST00000614090 TBC1D2Q9BYX2 928 aa15.8■□□□□ 0.12
PTPN20CP-201ENST00000614090 SYNGAP1Q96PV0 1343 aa15.79■□□□□ 0.12
PTPN20CP-201ENST00000614090 F6X3S4 739 aa15.79■□□□□ 0.12
PTPN20CP-201ENST00000614090 IFIT1P09914 478 aaKnown RBP15.79■□□□□ 0.12
PTPN20CP-201ENST00000614090 ATN1P54259 1190 aaPredicted RBP15.79■□□□□ 0.12
PTPN20CP-201ENST00000614090 HMGCS2P54868 508 aa15.79■□□□□ 0.12
PTPN20CP-201ENST00000614090 LRRC24Q50LG9 513 aa15.79■□□□□ 0.12
PTPN20CP-201ENST00000614090 ATXN2LQ8WWM7 1075 aaKnown RBP15.79■□□□□ 0.12
PTPN20CP-201ENST00000614090 USP6NLQ92738 828 aa15.79■□□□□ 0.12
PTPN20CP-201ENST00000614090 C9orf78Q9NZ63 289 aaPredicted RBP15.79■□□□□ 0.12
PTPN20CP-201ENST00000614090 DDTLA6NHG4 134 aaPredicted RBP15.78■□□□□ 0.12
PTPN20CP-201ENST00000614090 MAPK4P31152 587 aa15.78■□□□□ 0.12
PTPN20CP-201ENST00000614090 RGS2P41220 211 aa15.78■□□□□ 0.12
PTPN20CP-201ENST00000614090 SPP2Q13103 211 aa15.78■□□□□ 0.12
PTPN20CP-201ENST00000614090 PUM3Q15397 648 aaKnown RBP15.78■□□□□ 0.12
PTPN20CP-201ENST00000614090 ZNF280CQ8ND82 737 aa15.78■□□□□ 0.12
PTPN20CP-201ENST00000614090 APBA2Q99767 749 aa15.78■□□□□ 0.12
PTPN20CP-201ENST00000614090 DNM1LO00429 736 aa15.77■□□□□ 0.12
PTPN20CP-201ENST00000614090 MSCO60682 206 aa15.77■□□□□ 0.12
PTPN20CP-201ENST00000614090 LDHBP07195 334 aaKnown RBP15.77■□□□□ 0.12
PTPN20CP-201ENST00000614090 SLURP2P0DP57 97 aa15.77■□□□□ 0.12
PTPN20CP-201ENST00000614090 FGFR2P21802 821 aa15.77■□□□□ 0.12
PTPN20CP-201ENST00000614090 CCL14Q16627 93 aa15.77■□□□□ 0.12
PTPN20CP-201ENST00000614090 SH3D19Q5HYK7 790 aa15.77■□□□□ 0.12
PTPN20CP-201ENST00000614090 ADAMTS19Q8TE59 1207 aa15.77■□□□□ 0.12
PTPN20CP-201ENST00000614090 SUCLG2Q96I99 432 aa15.77■□□□□ 0.12
PTPN20CP-201ENST00000614090 OSBPL5Q9H0X9 879 aaPredicted RBP15.77■□□□□ 0.12
PTPN20CP-201ENST00000614090 ARIH1Q9Y4X5 557 aaPredicted RBP15.77■□□□□ 0.12
PTPN20CP-201ENST00000614090 TBC1D12O60347 775 aa15.76■□□□□ 0.11
PTPN20CP-201ENST00000614090 ALDH1L1O75891 902 aa15.76■□□□□ 0.11
PTPN20CP-201ENST00000614090 IRX3P78415 501 aaPredicted RBP15.76■□□□□ 0.11
PTPN20CP-201ENST00000614090 GRIN2CQ14957 1233 aa15.76■□□□□ 0.11
PTPN20CP-201ENST00000614090 MORN1Q5T089 497 aa15.76■□□□□ 0.11
PTPN20CP-201ENST00000614090 GPRC5AQ8NFJ5 357 aa15.76■□□□□ 0.11
PTPN20CP-201ENST00000614090 LPAR1Q92633 364 aa15.76■□□□□ 0.11
PTPN20CP-201ENST00000614090 BADQ92934 168 aa15.76■□□□□ 0.11
PTPN20CP-201ENST00000614090 KAZALD1Q96I82 304 aa15.76■□□□□ 0.11
PTPN20CP-201ENST00000614090 THEGQ9P2T0 379 aa15.76■□□□□ 0.11
PTPN20CP-201ENST00000614090 ATP11BQ9Y2G3 1177 aa15.76■□□□□ 0.11
PTPN20CP-201ENST00000614090 GAKO14976 1311 aa15.75■□□□□ 0.11
PTPN20CP-201ENST00000614090 SALL1Q9NSC2 1324 aa15.75■□□□□ 0.11
PTPN20CP-201ENST00000614090 ASB2Q96Q27 587 aa15.75■□□□□ 0.11
PTPN20CP-201ENST00000614090 UHRF1Q96T88 793 aaPredicted RBP15.75■□□□□ 0.11
PTPN20CP-201ENST00000614090 TXNRD2Q9NNW7 524 aa15.75■□□□□ 0.11
PTPN20CP-201ENST00000614090 PRDM5Q9NQX1 630 aaPredicted RBP15.75■□□□□ 0.11
PTPN20CP-201ENST00000614090 DDX20Q9UHI6 824 aaKnown RBP15.75■□□□□ 0.11
PTPN20CP-201ENST00000614090 MUC6Q6W4X9 2439 aa15.75■□□□□ 0.11
PTPN20CP-201ENST00000614090 RABL6Q3YEC7 729 aaPredicted RBP15.74■□□□□ 0.11
PTPN20CP-201ENST00000614090 GPR142Q7Z601 462 aa15.74■□□□□ 0.11
PTPN20CP-201ENST00000614090 RNPC3Q96LT9 517 aaKnown RBP15.74■□□□□ 0.11
PTPN20CP-201ENST00000614090 C1QTNF1Q9BXJ1 281 aa15.74■□□□□ 0.11
PTPN20CP-201ENST00000614090 DDX4Q9NQI0 724 aaKnown RBP15.74■□□□□ 0.11
PTPN20CP-201ENST00000614090 UTYO14607 1347 aa15.73■□□□□ 0.11
PTPN20CP-201ENST00000614090 TCF20Q9UGU0 1960 aaKnown RBP15.73■□□□□ 0.11
PTPN20CP-201ENST00000614090 SLC5A1P13866 664 aa15.73■□□□□ 0.11
PTPN20CP-201ENST00000614090 HOXA7P31268 230 aaPredicted RBP15.73■□□□□ 0.11
PTPN20CP-201ENST00000614090 HERVK_113P62684 666 aa15.73■□□□□ 0.11
PTPN20CP-201ENST00000614090 MFSD14CQ5VZR4 134 aa15.73■□□□□ 0.11
PTPN20CP-201ENST00000614090 PLEKHH3Q7Z736 793 aa15.73■□□□□ 0.11
PTPN20CP-201ENST00000614090 CCAR1Q8IX12 1150 aaKnown RBP15.73■□□□□ 0.11
PTPN20CP-201ENST00000614090 BICC1Q9H694 974 aaKnown RBP15.73■□□□□ 0.11
PTPN20CP-201ENST00000614090 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.73■□□□□ 0.11
PTPN20CP-201ENST00000614090 PDLIM7Q9NR12 457 aa15.73■□□□□ 0.11
PTPN20CP-201ENST00000614090 USP17L5A8MUK1 530 aa15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 PEX10O60683 326 aa15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 DNAJB2P25686 324 aa15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 ERVK-9P63128 1117 aa15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 ERVK-24P63145 666 aa15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 MAP2K5Q13163 448 aa15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 PICALMQ13492 652 aa15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 SNX17Q15036 470 aa15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 SLC39A5Q6ZMH5 540 aa15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 GTF3C2Q8WUA4 911 aaPredicted RBP15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 LPIN2Q92539 896 aa15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 P2RX7Q99572 595 aaKnown RBP15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 PORCNQ9H237 461 aa15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 AS3MTQ9HBK9 375 aa15.72■□□□□ 0.11
PTPN20CP-201ENST00000614090 FAM196BA6NMK8 535 aa15.71■□□□□ 0.11
PTPN20CP-201ENST00000614090 CAP2P40123 477 aa15.71■□□□□ 0.11
PTPN20CP-201ENST00000614090 MRPS5P82675 430 aaKnown RBP15.71■□□□□ 0.11
PTPN20CP-201ENST00000614090 AKNAD1Q5T1N1 836 aa15.71■□□□□ 0.11
PTPN20CP-201ENST00000614090 SRCIN1Q9C0H9 1055 aa15.71■□□□□ 0.11
PTPN20CP-201ENST00000614090 RBPJLQ9UBG7 517 aa15.71■□□□□ 0.11
PTPN20CP-201ENST00000614090 HCN4Q9Y3Q4 1203 aa15.71■□□□□ 0.11
PTPN20CP-201ENST00000614090 PLXNA1Q9UIW2 1896 aa15.71■□□□□ 0.11
PTPN20CP-201ENST00000614090 IL16Q14005 1332 aa15.7■□□□□ 0.1
PTPN20CP-201ENST00000614090 NPM3O75607 178 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms