RNA–Protein interactions for RNA: ENST00000613916.1

PVT1-222, Transcript of Pvt1 oncogene, humanhuman

Gene PVT1, Length 137 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-222ENST00000613916 PPIP5K2O43314 1243 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 HMGB1P09429 215 aaKnown RBP8.68□□□□□ -1.02
PVT1-222ENST00000613916 TDO2P48775 406 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 RHBDL3P58872 404 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 EVX2Q03828 476 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 CTDSPL2Q05D32 466 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 ME3Q16798 604 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 STRIP1Q5VSL9 837 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 CTR9Q6PD62 1173 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 Q6ZUG5 572 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 CDC37L1Q7L3B6 337 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 CTU1Q7Z7A3 348 aaKnown RBP8.68□□□□□ -1.02
PVT1-222ENST00000613916 NIM1KQ8IY84 436 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 FBXL16Q8N461 479 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 SH3RF3Q8TEJ3 882 aaPredicted RBP8.68□□□□□ -1.02
PVT1-222ENST00000613916 LRRC2Q9BYS8 371 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 CRNKL1Q9BZJ0 848 aaKnown RBP8.68□□□□□ -1.02
PVT1-222ENST00000613916 TPCN1Q9ULQ1 816 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 DAGLAQ9Y4D2 1042 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 NEDD4P46934 1319 aa8.68□□□□□ -1.02
PVT1-222ENST00000613916 USP17L3A6NCW0 530 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 USP17L4A6NCW7 530 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 G3V3G9 751 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 FGRP09769 529 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 BTDP43251 543 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 HIRAP54198 1017 aaPredicted RBP8.67□□□□□ -1.02
PVT1-222ENST00000613916 HUNKP57058 714 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 PPARAQ07869 468 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 SBK1Q52WX2 424 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 AKNAD1Q5T1N1 836 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 DCAF8Q5TAQ9 597 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 CYB5R4Q7L1T6 521 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 CHST3Q7LGC8 479 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 USP17L1Q7RTZ2 530 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 WDR19Q8NEZ3 1342 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 NCOA7Q8NI08 942 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 STAG1Q8WVM7 1258 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 FBXW7Q969H0 707 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 INTS4Q96HW7 963 aaKnown RBP8.67□□□□□ -1.02
PVT1-222ENST00000613916 ZSCAN31Q96LW9 406 aaPredicted RBP8.67□□□□□ -1.02
PVT1-222ENST00000613916 NACAP1Q9BZK3 213 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 GPHNQ9NQX3 736 aaPredicted RBP8.67□□□□□ -1.02
PVT1-222ENST00000613916 ATP8A2Q9NTI2 1148 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 TTF2Q9UNY4 1162 aaKnown RBP8.67□□□□□ -1.02
PVT1-222ENST00000613916 HPS5Q9UPZ3 1129 aa8.67□□□□□ -1.02
PVT1-222ENST00000613916 BAZ2BQ9UIF8 2168 aaKnown RBP8.66□□□□□ -1.02
PVT1-222ENST00000613916 B4E1Z4 1266 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 USP17L12C9JPN9 530 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 USP17L21D6R901 530 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 F8W031 263 aaPredicted RBP8.66□□□□□ -1.02
PVT1-222ENST00000613916 PRC1O43663 620 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 BAG3O95817 575 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 USP17L8P0C7I0 530 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 CYP2D6P10635 497 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 GMPSP49915 693 aaPredicted RBP8.66□□□□□ -1.02
PVT1-222ENST00000613916 EVCP57679 992 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 CXCL9Q07325 125 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 ANKRD1Q15327 319 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 HABP4Q5JVS0 413 aaKnown RBP8.66□□□□□ -1.02
PVT1-222ENST00000613916 RGMBQ6NW40 437 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 HHIPL2Q6UWX4 724 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 CERS3Q8IU89 383 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 SLF2Q8IX21 1173 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 BRF1Q92994 677 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 CCDC102AQ96A19 550 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 GMLQ99445 158 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 MRIQ9BWK5 157 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 ZNF408Q9H9D4 720 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 SH2B1Q9NRF2 756 aaPredicted RBP8.66□□□□□ -1.02
PVT1-222ENST00000613916 RNF186Q9NXI6 227 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 CHMP5Q9NZZ3 219 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 ZNRF3Q9ULT6 936 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 CIZ1Q9ULV3 898 aaPredicted RBP8.66□□□□□ -1.02
PVT1-222ENST00000613916 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.66□□□□□ -1.02
PVT1-222ENST00000613916 BRCA2P51587 3418 aa8.66□□□□□ -1.02
PVT1-222ENST00000613916 ROBO3Q96MS0 1386 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 MINDY4BA8MYZ0 360 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 HSP90AA1P07900 732 aaKnown RBP8.65□□□□□ -1.02
PVT1-222ENST00000613916 SLC10A3P09131 477 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 VIL1P09327 827 aaKnown RBP8.65□□□□□ -1.02
PVT1-222ENST00000613916 MCM5P33992 734 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 HDLBPQ00341 1268 aaKnown RBP8.65□□□□□ -1.02
PVT1-222ENST00000613916 KIF23Q02241 960 aaPredicted RBP8.65□□□□□ -1.02
PVT1-222ENST00000613916 APOBRQ0VD83 1088 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 PKN2Q16513 984 aaKnown RBP8.65□□□□□ -1.02
PVT1-222ENST00000613916 C12orf60Q5U649 245 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 APOBEC3HQ6NTF7 200 aaKnown RBP8.65□□□□□ -1.02
PVT1-222ENST00000613916 MFSD6Q6ZSS7 791 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 NECAB1Q8N987 351 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 TRPM4Q8TD43 1214 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 IGDCC4Q8TDY8 1250 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 TGFBRAP1Q8WUH2 860 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 CWC22Q9HCG8 908 aaKnown RBP8.65□□□□□ -1.02
PVT1-222ENST00000613916 ZSWIM5Q9P217 1185 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 BRPF3Q9ULD4 1205 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 PCDHAC2Q9Y5I4 1007 aa8.65□□□□□ -1.02
PVT1-222ENST00000613916 ATAD5Q96QE3 1844 aa8.64□□□□□ -1.03
PVT1-222ENST00000613916 FLT1P17948 1338 aa8.64□□□□□ -1.03
PVT1-222ENST00000613916 PSMD14O00487 310 aa8.64□□□□□ -1.03
PVT1-222ENST00000613916 SH2B2O14492 632 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms