RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 USP40Q9NVE5 1235 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 FZD1Q9UP38 647 aa9.96□□□□□ -0.82
PSMB3-208ENST00000613870 GSG1L2A8MUP6 293 aa9.95□□□□□ -0.82
PSMB3-208ENST00000613870 TRDNQ13061 729 aa9.95□□□□□ -0.82
PSMB3-208ENST00000613870 PRKG1Q13976 671 aa9.95□□□□□ -0.82
PSMB3-208ENST00000613870 BLOC1S2Q6QNY1 142 aa9.95□□□□□ -0.82
PSMB3-208ENST00000613870 NOL8Q76FK4 1167 aaKnown RBP9.95□□□□□ -0.82
PSMB3-208ENST00000613870 RALYLQ86SE5 291 aaKnown RBP9.95□□□□□ -0.82
PSMB3-208ENST00000613870 MAPKAPK5Q8IW41 473 aa9.95□□□□□ -0.82
PSMB3-208ENST00000613870 TGFBRAP1Q8WUH2 860 aa9.95□□□□□ -0.82
PSMB3-208ENST00000613870 CSRNP1Q96S65 589 aa9.95□□□□□ -0.82
PSMB3-208ENST00000613870 UPF3BQ9BZI7 483 aaKnown RBP9.95□□□□□ -0.82
PSMB3-208ENST00000613870 MCM9Q9NXL9 1143 aa9.95□□□□□ -0.82
PSMB3-208ENST00000613870 SAP30BPQ9UHR5 308 aaKnown RBP9.95□□□□□ -0.82
PSMB3-208ENST00000613870 SERPINA10Q9UK55 444 aa9.95□□□□□ -0.82
PSMB3-208ENST00000613870 DAGLAQ9Y4D2 1042 aa9.95□□□□□ -0.82
PSMB3-208ENST00000613870 CYP46A1Q9Y6A2 500 aa9.95□□□□□ -0.82
PSMB3-208ENST00000613870 DOCK2Q92608 1830 aa9.95□□□□□ -0.82
PSMB3-208ENST00000613870 MYO5AQ9Y4I1 1855 aaKnown RBP9.95□□□□□ -0.82
PSMB3-208ENST00000613870 MAST2Q6P0Q8 1798 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 SSC5DA1L4H1 1573 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 RPAP1Q9BWH6 1393 aaPredicted RBP9.94□□□□□ -0.82
PSMB3-208ENST00000613870 GPR75-ASB3A0A0A6YYF3 556 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 CA12O43570 354 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 MYO1BO43795 1136 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 POLR3DP05423 398 aaPredicted RBP9.94□□□□□ -0.82
PSMB3-208ENST00000613870 HSP90AA1P07900 732 aaKnown RBP9.94□□□□□ -0.82
PSMB3-208ENST00000613870 SLC3A2P08195 630 aaKnown RBP9.94□□□□□ -0.82
PSMB3-208ENST00000613870 CYP21A2P08686 494 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 NF2P35240 595 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 PPP4CP60510 307 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 PICALMQ13492 652 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 TTLL12Q14166 644 aaPredicted RBP9.94□□□□□ -0.82
PSMB3-208ENST00000613870 ALX1Q15699 326 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 SLC4A8Q2Y0W8 1093 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 RRP12Q5JTH9 1297 aaKnown RBP9.94□□□□□ -0.82
PSMB3-208ENST00000613870 LDLRAD1Q5T700 205 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 HHIPL2Q6UWX4 724 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 FAM163AQ96GL9 167 aaPredicted RBP9.94□□□□□ -0.82
PSMB3-208ENST00000613870 NEK1Q96PY6 1258 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 TDRD3Q9H7E2 651 aaKnown RBP9.94□□□□□ -0.82
PSMB3-208ENST00000613870 VEZTQ9HBM0 779 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 ATP8A2Q9NTI2 1148 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 PDRG1Q9NUG6 133 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 TMOD2Q9NZR1 351 aa9.94□□□□□ -0.82
PSMB3-208ENST00000613870 GAKO14976 1311 aa9.93□□□□□ -0.82
PSMB3-208ENST00000613870 USP17L12C9JPN9 530 aa9.93□□□□□ -0.82
PSMB3-208ENST00000613870 USP17L21D6R901 530 aa9.93□□□□□ -0.82
PSMB3-208ENST00000613870 E7EWF7 191 aa9.93□□□□□ -0.82
PSMB3-208ENST00000613870 CAPN15O75808 1086 aa9.93□□□□□ -0.82
PSMB3-208ENST00000613870 CPA1P15085 419 aa9.93□□□□□ -0.82
PSMB3-208ENST00000613870 HDLBPQ00341 1268 aaKnown RBP9.93□□□□□ -0.82
PSMB3-208ENST00000613870 CTDSPL2Q05D32 466 aa9.93□□□□□ -0.82
PSMB3-208ENST00000613870 RASA3Q14644 834 aa9.93□□□□□ -0.82
PSMB3-208ENST00000613870 SPDYE2Q495Y8 402 aa9.93□□□□□ -0.82
PSMB3-208ENST00000613870 NBPF12Q5TAG4 269 aaPredicted RBP9.93□□□□□ -0.82
PSMB3-208ENST00000613870 GIMAP6Q6P9H5 292 aa9.93□□□□□ -0.82
PSMB3-208ENST00000613870 IPO9Q96P70 1041 aaKnown RBP9.93□□□□□ -0.82
PSMB3-208ENST00000613870 KIF2CQ99661 725 aa9.93□□□□□ -0.82
PSMB3-208ENST00000613870 EPB41L4AQ9HCS5 686 aaPredicted RBP9.93□□□□□ -0.82
PSMB3-208ENST00000613870 RNF186Q9NXI6 227 aa9.93□□□□□ -0.82
PSMB3-208ENST00000613870 ZNF70Q9UC06 446 aaPredicted RBP9.93□□□□□ -0.82
PSMB3-208ENST00000613870 ANGEL1Q9UNK9 670 aaKnown RBP9.93□□□□□ -0.82
PSMB3-208ENST00000613870 PPP2R3BQ9Y5P8 575 aa9.93□□□□□ -0.82
PSMB3-208ENST00000613870 CYP2D7A0A087X1C5 515 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 FOXP2O15409 715 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 USP2O75604 605 aaPredicted RBP9.92□□□□□ -0.82
PSMB3-208ENST00000613870 TRPA1O75762 1119 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 HMGB1P09429 215 aaKnown RBP9.92□□□□□ -0.82
PSMB3-208ENST00000613870 SLC4A3P48751 1232 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 PPARAQ07869 468 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 MAP3K11Q16584 847 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 ADCK5Q3MIX3 580 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 MFSD6Q6ZSS7 791 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 RUFY3Q7L099 469 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 ARMC9Q7Z3E5 817 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 ZSCAN29Q8IWY8 852 aaPredicted RBP9.92□□□□□ -0.82
PSMB3-208ENST00000613870 NCOA7Q8NI08 942 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 KCNB2Q92953 911 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 ZDHHC15Q96MV8 337 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 MRIQ9BWK5 157 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 TM6SF1Q9BZW5 370 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 RNF41Q9H4P4 317 aaPredicted RBP9.92□□□□□ -0.82
PSMB3-208ENST00000613870 DCP1AQ9NPI6 582 aaPredicted RBP9.92□□□□□ -0.82
PSMB3-208ENST00000613870 ARPP21Q9UBL0 812 aaPredicted RBP9.92□□□□□ -0.82
PSMB3-208ENST00000613870 NAP1L2Q9ULW6 460 aaPredicted RBP9.92□□□□□ -0.82
PSMB3-208ENST00000613870 TAF6LQ9Y6J9 622 aa9.92□□□□□ -0.82
PSMB3-208ENST00000613870 ZMYM6O95789 1325 aa9.91□□□□□ -0.82
PSMB3-208ENST00000613870 CYP2D6P10635 497 aa9.91□□□□□ -0.82
PSMB3-208ENST00000613870 RPS6KB1P23443 525 aa9.91□□□□□ -0.82
PSMB3-208ENST00000613870 MCM2P49736 904 aa9.91□□□□□ -0.82
PSMB3-208ENST00000613870 CACNB3P54284 484 aa9.91□□□□□ -0.82
PSMB3-208ENST00000613870 TCP10Q12799 353 aa9.91□□□□□ -0.82
PSMB3-208ENST00000613870 SUPT20HL1Q3ZLR7 823 aa9.91□□□□□ -0.82
PSMB3-208ENST00000613870 APOBEC3HQ6NTF7 200 aaKnown RBP9.91□□□□□ -0.82
PSMB3-208ENST00000613870 CDC42EP5Q6NZY7 148 aa9.91□□□□□ -0.82
PSMB3-208ENST00000613870 CTR9Q6PD62 1173 aa9.91□□□□□ -0.82
PSMB3-208ENST00000613870 TBC1D10CQ8IV04 446 aa9.91□□□□□ -0.82
PSMB3-208ENST00000613870 CDAN1Q8IWY9 1227 aa9.91□□□□□ -0.82
PSMB3-208ENST00000613870 REM2Q8IYK8 340 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms