RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 GNAT2P19087 354 aa13.65□□□□□ -0.22
SLIRP-212ENST00000613856 GRIK5Q16478 980 aa13.65□□□□□ -0.22
SLIRP-212ENST00000613856 KCNB2Q92953 911 aa13.65□□□□□ -0.22
SLIRP-212ENST00000613856 FAM163AQ96GL9 167 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-212ENST00000613856 ZBED3Q96IU2 234 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-212ENST00000613856 STRBPQ96SI9 672 aaKnown RBP13.65□□□□□ -0.22
SLIRP-212ENST00000613856 RIOK1Q9BRS2 568 aaKnown RBP13.65□□□□□ -0.22
SLIRP-212ENST00000613856 PTPN22Q9Y2R2 807 aa13.65□□□□□ -0.22
SLIRP-212ENST00000613856 RBM8AQ9Y5S9 174 aaKnown RBP13.65□□□□□ -0.22
SLIRP-212ENST00000613856 U3KPZ7 1027 aaPredicted RBP13.65□□□□□ -0.22
SLIRP-212ENST00000613856 MAGEB6P1A0A0J9YX57 407 aa13.64□□□□□ -0.23
SLIRP-212ENST00000613856 FOXP2O15409 715 aa13.64□□□□□ -0.23
SLIRP-212ENST00000613856 NF2P35240 595 aa13.64□□□□□ -0.23
SLIRP-212ENST00000613856 CRHR2Q13324 411 aa13.64□□□□□ -0.23
SLIRP-212ENST00000613856 NECTIN1Q15223 517 aa13.64□□□□□ -0.23
SLIRP-212ENST00000613856 ARMC9Q7Z3E5 817 aa13.64□□□□□ -0.23
SLIRP-212ENST00000613856 LCORLQ8N3X6 602 aa13.64□□□□□ -0.23
SLIRP-212ENST00000613856 WNK4Q96J92 1243 aa13.64□□□□□ -0.23
SLIRP-212ENST00000613856 BAZ2AQ9UIF9 1905 aaKnown RBP13.63□□□□□ -0.23
SLIRP-212ENST00000613856 TRIOBPQ9H2D6 2365 aa13.63□□□□□ -0.23
SLIRP-212ENST00000613856 MYCP01106 439 aaPredicted RBP13.63□□□□□ -0.23
SLIRP-212ENST00000613856 PPP4CP60510 307 aa13.63□□□□□ -0.23
SLIRP-212ENST00000613856 HDLBPQ00341 1268 aaKnown RBP13.63□□□□□ -0.23
SLIRP-212ENST00000613856 ALX1Q15699 326 aa13.63□□□□□ -0.23
SLIRP-212ENST00000613856 VPS53Q5VIR6 699 aa13.63□□□□□ -0.23
SLIRP-212ENST00000613856 KIF2CQ99661 725 aa13.63□□□□□ -0.23
SLIRP-212ENST00000613856 PTPN18Q99952 460 aa13.63□□□□□ -0.23
SLIRP-212ENST00000613856 MRIQ9BWK5 157 aa13.63□□□□□ -0.23
SLIRP-212ENST00000613856 ARMT1Q9H993 441 aa13.63□□□□□ -0.23
SLIRP-212ENST00000613856 GPR75-ASB3A0A0A6YYF3 556 aa13.62□□□□□ -0.23
SLIRP-212ENST00000613856 DIXDC1Q155Q3 683 aa13.62□□□□□ -0.23
SLIRP-212ENST00000613856 RNF20Q5VTR2 975 aa13.62□□□□□ -0.23
SLIRP-212ENST00000613856 CREB3L3Q68CJ9 461 aa13.62□□□□□ -0.23
SLIRP-212ENST00000613856 OGFOD1Q8N543 542 aa13.62□□□□□ -0.23
SLIRP-212ENST00000613856 MIGA1Q8NAN2 632 aa13.62□□□□□ -0.23
SLIRP-212ENST00000613856 IL27Q8NEV9 243 aa13.62□□□□□ -0.23
SLIRP-212ENST00000613856 ARMC5Q96C12 935 aa13.62□□□□□ -0.23
SLIRP-212ENST00000613856 DEFB129Q9H1M3 183 aa13.62□□□□□ -0.23
SLIRP-212ENST00000613856 CTNNA3Q9UI47 895 aa13.62□□□□□ -0.23
SLIRP-212ENST00000613856 PALD1Q9ULE6 856 aa13.62□□□□□ -0.23
SLIRP-212ENST00000613856 TTF2Q9UNY4 1162 aaKnown RBP13.62□□□□□ -0.23
SLIRP-212ENST00000613856 MANSC4A6NHS7 340 aaPredicted RBP13.61□□□□□ -0.23
SLIRP-212ENST00000613856 PATL2C9JE40 543 aaKnown RBP13.61□□□□□ -0.23
SLIRP-212ENST00000613856 SLC27A2O14975 620 aa13.61□□□□□ -0.23
SLIRP-212ENST00000613856 BAG3O95817 575 aa13.61□□□□□ -0.23
SLIRP-212ENST00000613856 PLCG2P16885 1265 aa13.61□□□□□ -0.23
SLIRP-212ENST00000613856 ANP32AP39687 249 aaKnown RBP13.61□□□□□ -0.23
SLIRP-212ENST00000613856 TSGA10IPQ3SY00 556 aa13.61□□□□□ -0.23
SLIRP-212ENST00000613856 GIMAP6Q6P9H5 292 aa13.61□□□□□ -0.23
SLIRP-212ENST00000613856 HHIPL2Q6UWX4 724 aa13.61□□□□□ -0.23
SLIRP-212ENST00000613856 APOBEC3FQ8IUX4 373 aaKnown RBP13.61□□□□□ -0.23
SLIRP-212ENST00000613856 SLC10A4Q96EP9 437 aa13.61□□□□□ -0.23
SLIRP-212ENST00000613856 NOL10Q9BSC4 688 aaKnown RBP13.61□□□□□ -0.23
SLIRP-212ENST00000613856 MYH1P12882 1939 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 CLRN2A0PK11 232 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 GSG1L2A8MUP6 293 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 CEP290O15078 2479 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 ZKSCAN1P17029 563 aaPredicted RBP13.6□□□□□ -0.23
SLIRP-212ENST00000613856 RANBP2P49792 3224 aaKnown RBP13.6□□□□□ -0.23
SLIRP-212ENST00000613856 MMP14P50281 582 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 DYNLL1P63167 89 aaKnown RBP13.6□□□□□ -0.23
SLIRP-212ENST00000613856 RABEP1Q15276 862 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 NBPF12Q5TAG4 269 aaPredicted RBP13.6□□□□□ -0.23
SLIRP-212ENST00000613856 CDAN1Q8IWY9 1227 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 TEKT1Q969V4 418 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 CRNKL1Q9BZJ0 848 aaKnown RBP13.6□□□□□ -0.23
SLIRP-212ENST00000613856 NACAP1Q9BZK3 213 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 EPB41L4AQ9HCS5 686 aaPredicted RBP13.6□□□□□ -0.23
SLIRP-212ENST00000613856 AATFQ9NY61 560 aaKnown RBP eCLIP13.6□□□□□ -0.23
SLIRP-212ENST00000613856 SERPINA10Q9UK55 444 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 DAGLAQ9Y4D2 1042 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 SNX14Q9Y5W7 946 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 SLC4A4Q9Y6R1 1079 aa13.6□□□□□ -0.23
SLIRP-212ENST00000613856 F8W031 263 aaPredicted RBP13.59□□□□□ -0.23
SLIRP-212ENST00000613856 H0YGN5 161 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 ALDH1A1P00352 501 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 FGAP02671 866 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 BTDP43251 543 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 KRT32Q14532 448 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 MAP3K11Q16584 847 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 IFNL3Q8IZI9 196 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 ZNF333Q96JL9 665 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 ZDHHC15Q96MV8 337 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 TM6SF1Q9BZW5 370 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 EFCC1Q9HA90 598 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 ATP8A2Q9NTI2 1148 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 PTCH2Q9Y6C5 1203 aa13.59□□□□□ -0.23
SLIRP-212ENST00000613856 PRKAB2O43741 272 aa13.58□□□□□ -0.24
SLIRP-212ENST00000613856 USP2O75604 605 aaPredicted RBP13.58□□□□□ -0.24
SLIRP-212ENST00000613856 CYP21A2P08686 494 aa13.58□□□□□ -0.24
SLIRP-212ENST00000613856 ZBTB48P10074 688 aaPredicted RBP13.58□□□□□ -0.24
SLIRP-212ENST00000613856 CRKP46108 304 aa13.58□□□□□ -0.24
SLIRP-212ENST00000613856 RHBDL3P58872 404 aa13.58□□□□□ -0.24
SLIRP-212ENST00000613856 IMMTQ16891 758 aaKnown RBP13.58□□□□□ -0.24
SLIRP-212ENST00000613856 OTUD5Q96G74 571 aa13.58□□□□□ -0.24
SLIRP-212ENST00000613856 ERO1AQ96HE7 468 aa13.58□□□□□ -0.24
SLIRP-212ENST00000613856 NAPBQ9H115 298 aa13.58□□□□□ -0.24
SLIRP-212ENST00000613856 COL6A3P12111 3177 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms