RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 ZNF654Q8IZM8 581 aa20.83■□□□□ 0.93
SEMA6C-209ENST00000613223 PHKBQ93100 1093 aa20.83■□□□□ 0.93
SEMA6C-209ENST00000613223 USP28Q96RU2 1077 aa20.83■□□□□ 0.93
SEMA6C-209ENST00000613223 ZSCAN10Q96SZ4 725 aaPredicted RBP20.83■□□□□ 0.93
SEMA6C-209ENST00000613223 PARP3Q9Y6F1 533 aa20.83■□□□□ 0.93
SEMA6C-209ENST00000613223 MYH2Q9UKX2 1941 aa20.83■□□□□ 0.92
SEMA6C-209ENST00000613223 CCDC196A0A1B0GTZ2 297 aa20.83■□□□□ 0.92
SEMA6C-209ENST00000613223 BAG3O95817 575 aa20.83■□□□□ 0.92
SEMA6C-209ENST00000613223 LIG1P18858 919 aa20.83■□□□□ 0.92
SEMA6C-209ENST00000613223 PPP4CP60510 307 aa20.83■□□□□ 0.92
SEMA6C-209ENST00000613223 GRIK5Q16478 980 aa20.83■□□□□ 0.92
SEMA6C-209ENST00000613223 UBE2Q2Q8WVN8 375 aa20.83■□□□□ 0.92
SEMA6C-209ENST00000613223 MROH7-TTC4A0A0A0MT08 1334 aa20.82■□□□□ 0.92
SEMA6C-209ENST00000613223 C6orf229H3BNL8 230 aa20.82■□□□□ 0.92
SEMA6C-209ENST00000613223 FMNL1O95466 1100 aaPredicted RBP20.82■□□□□ 0.92
SEMA6C-209ENST00000613223 MMP10P09238 476 aa20.82■□□□□ 0.92
SEMA6C-209ENST00000613223 PDE6BP35913 854 aa20.82■□□□□ 0.92
SEMA6C-209ENST00000613223 SSRP1Q08945 709 aaKnown RBP20.82■□□□□ 0.92
SEMA6C-209ENST00000613223 IQCA1Q86XH1 822 aa20.82■□□□□ 0.92
SEMA6C-209ENST00000613223 NOL10Q9BSC4 688 aaKnown RBP20.82■□□□□ 0.92
SEMA6C-209ENST00000613223 DLEC1Q9Y238 1755 aa20.82■□□□□ 0.92
SEMA6C-209ENST00000613223 KIF23Q02241 960 aaPredicted RBP20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 CEBPZQ03701 1054 aaKnown RBP20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 DIXDC1Q155Q3 683 aa20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 CERS3Q8IU89 383 aa20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 ENAHQ8N8S7 591 aaPredicted RBP20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 BICD2Q8TD16 824 aa20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 FTOQ9C0B1 505 aaKnown RBP eCLIP20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 ZNF500O60304 480 aaPredicted RBP20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 PRDM1O75626 825 aa20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 PPP2R5BQ15173 497 aa20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 TBC1D22AQ8WUA7 517 aa20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 WASF1Q92558 559 aa20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 AIFM3Q96NN9 605 aa20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 GJB4Q9NTQ9 266 aa20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 DDX19AQ9NUU7 478 aaKnown RBP20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 MKRN1Q9UHC7 482 aaKnown RBP20.81■□□□□ 0.92
SEMA6C-209ENST00000613223 COL11A2P13942 1736 aaPredicted RBP20.8■□□□□ 0.92
SEMA6C-209ENST00000613223 ALDH1B1P30837 517 aa20.8■□□□□ 0.92
SEMA6C-209ENST00000613223 KRT40Q6A162 431 aa20.8■□□□□ 0.92
SEMA6C-209ENST00000613223 FANCBQ8NB91 859 aa20.8■□□□□ 0.92
SEMA6C-209ENST00000613223 SH3RF3Q8TEJ3 882 aaPredicted RBP20.8■□□□□ 0.92
SEMA6C-209ENST00000613223 SLC26A6Q9BXS9 759 aa20.8■□□□□ 0.92
SEMA6C-209ENST00000613223 NUP62CLQ9H1M0 184 aa20.8■□□□□ 0.92
SEMA6C-209ENST00000613223 MCM9Q9NXL9 1143 aa20.8■□□□□ 0.92
SEMA6C-209ENST00000613223 RTEL1Q9NZ71 1219 aa20.8■□□□□ 0.92
SEMA6C-209ENST00000613223 RRP9O43818 475 aaKnown RBP20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 CYP2D6P10635 497 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 USP5P45974 858 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 NT5C2P49902 561 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 PDE4BQ07343 736 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 TRIM22Q8IYM9 498 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 RTFDC1Q9BY42 306 aaPredicted RBP20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 DACT1Q9NYF0 836 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 KIF28PB7ZC32 967 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 TERF1P54274 439 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 EVX2Q03828 476 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 TRIM29Q14134 588 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 IFIT1BQ5T764 474 aaKnown RBP20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 MYSM1Q5VVJ2 828 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 NUP133Q8WUM0 1156 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 NAV1Q8NEY1 1877 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 FAM205AQ6ZU69 1335 aa20.79■□□□□ 0.92
SEMA6C-209ENST00000613223 POLR3DP05423 398 aaPredicted RBP20.78■□□□□ 0.92
SEMA6C-209ENST00000613223 MFSD14BQ5SR56 506 aa20.78■□□□□ 0.92
SEMA6C-209ENST00000613223 MASTLQ96GX5 879 aa20.78■□□□□ 0.92
SEMA6C-209ENST00000613223 ROBO3Q96MS0 1386 aa20.78■□□□□ 0.92
SEMA6C-209ENST00000613223 USP17L8P0C7I0 530 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 C12orf60Q5U649 245 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 CATIPQ7Z7H3 387 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 NBPF11Q86T75 865 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 FUCA2Q9BTY2 467 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 COA1Q9GZY4 146 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 POLR3EQ9NVU0 708 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 CCDC39Q9UFE4 941 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 MAP3K11Q16584 847 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 SLF2Q8IX21 1173 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 AMOTL1Q8IY63 956 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 CRACR2BQ8N4Y2 399 aaPredicted RBP20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 RNF214Q8ND24 703 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 CLSTN2Q9H4D0 955 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 ZKSCAN5Q9Y2L8 839 aa20.77■□□□□ 0.92
SEMA6C-209ENST00000613223 GPR75-ASB3A0A0A6YYF3 556 aa20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 YEATS4O95619 227 aa20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 CALM1P0DP23 149 aa20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 CALM2P0DP24 149 aa20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 CALM3P0DP25 149 aa20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 MSL1Q68DK7 614 aa20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 MPNDQ8N594 471 aa20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 FAM163AQ96GL9 167 aaPredicted RBP20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 DDAH1O94760 285 aa20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 DEXIO95424 95 aa20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 PLCG2P16885 1265 aa20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 BTDP43251 543 aa20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 KCNG4Q8TDN1 519 aa20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 TNMDQ9H2S6 317 aa20.76■□□□□ 0.91
SEMA6C-209ENST00000613223 NR1I2O75469 434 aa20.75■□□□□ 0.91
SEMA6C-209ENST00000613223 ME1P48163 572 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms