RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 TNFAIP1Q13829 316 aa15.23■□□□□ 0.03
PRKN-210ENST00000612540 TOMM22Q9NS69 142 aa15.23■□□□□ 0.03
PRKN-210ENST00000612540 PGAP2Q9UHJ9 254 aa15.23■□□□□ 0.03
PRKN-210ENST00000612540 SNX14Q9Y5W7 946 aa15.23■□□□□ 0.03
PRKN-210ENST00000612540 ENTPD3O75355 529 aa15.22■□□□□ 0.03
PRKN-210ENST00000612540 HLA-DOAP06340 250 aa15.22■□□□□ 0.03
PRKN-210ENST00000612540 SLC3A2P08195 630 aaKnown RBP15.22■□□□□ 0.03
PRKN-210ENST00000612540 HIRAP54198 1017 aaPredicted RBP15.22■□□□□ 0.03
PRKN-210ENST00000612540 ANGEL2Q5VTE6 544 aaKnown RBP15.22■□□□□ 0.03
PRKN-210ENST00000612540 APOBEC3FQ8IUX4 373 aaKnown RBP15.22■□□□□ 0.03
PRKN-210ENST00000612540 TBC1D10CQ8IV04 446 aa15.22■□□□□ 0.03
PRKN-210ENST00000612540 RASEFQ8IZ41 740 aa15.22■□□□□ 0.03
PRKN-210ENST00000612540 SCAF8Q9UPN6 1271 aaKnown RBP15.22■□□□□ 0.03
PRKN-210ENST00000612540 TAF6LQ9Y6J9 622 aa15.22■□□□□ 0.03
PRKN-210ENST00000612540 NPM3O75607 178 aaKnown RBP15.21■□□□□ 0.03
PRKN-210ENST00000612540 ANAPC15P60006 121 aa15.21■□□□□ 0.03
PRKN-210ENST00000612540 EVX2Q03828 476 aa15.21■□□□□ 0.03
PRKN-210ENST00000612540 KRT32Q14532 448 aa15.21■□□□□ 0.03
PRKN-210ENST00000612540 SBK1Q52WX2 424 aa15.21■□□□□ 0.03
PRKN-210ENST00000612540 C12orf60Q5U649 245 aa15.21■□□□□ 0.03
PRKN-210ENST00000612540 FKBP1CQ5VVH2 108 aa15.21■□□□□ 0.03
PRKN-210ENST00000612540 PAXIP1Q6ZW49 1069 aaPredicted RBP15.21■□□□□ 0.03
PRKN-210ENST00000612540 TTC6Q86TZ1 520 aa15.21■□□□□ 0.03
PRKN-210ENST00000612540 ZFPM1Q8IX07 1006 aa15.21■□□□□ 0.03
PRKN-210ENST00000612540 FAM151AQ8WW52 585 aa15.21■□□□□ 0.03
PRKN-210ENST00000612540 JAKMIP1Q96N16 626 aaKnown RBP15.21■□□□□ 0.03
PRKN-210ENST00000612540 TRIM34Q9BYJ4 488 aa15.21■□□□□ 0.03
PRKN-210ENST00000612540 TLL2Q9Y6L7 1015 aa15.21■□□□□ 0.03
PRKN-210ENST00000612540 CASP8AP2Q9UKL3 1982 aa15.21■□□□□ 0.03
PRKN-210ENST00000612540 SIPA1L1O43166 1804 aa15.2■□□□□ 0.02
PRKN-210ENST00000612540 SMIM22K7EJ46 135 aa15.2■□□□□ 0.02
PRKN-210ENST00000612540 LBX1P52954 281 aa15.2■□□□□ 0.02
PRKN-210ENST00000612540 MAP2K1Q02750 393 aaPredicted RBP15.2■□□□□ 0.02
PRKN-210ENST00000612540 TRDNQ13061 729 aa15.2■□□□□ 0.02
PRKN-210ENST00000612540 GRM1Q13255 1194 aa15.2■□□□□ 0.02
PRKN-210ENST00000612540 RRP12Q5JTH9 1297 aaKnown RBP15.2■□□□□ 0.02
PRKN-210ENST00000612540 RALYLQ86SE5 291 aaKnown RBP15.2■□□□□ 0.02
PRKN-210ENST00000612540 CRACR2BQ8N4Y2 399 aaPredicted RBP15.2■□□□□ 0.02
PRKN-210ENST00000612540 ZC3H15Q8WU90 426 aaKnown RBP15.2■□□□□ 0.02
PRKN-210ENST00000612540 DCPSQ96C86 337 aaKnown RBP15.2■□□□□ 0.02
PRKN-210ENST00000612540 CAPNS2Q96L46 248 aa15.2■□□□□ 0.02
PRKN-210ENST00000612540 TMEM39BQ9GZU3 492 aa15.2■□□□□ 0.02
PRKN-210ENST00000612540 NBPF3Q9H094 633 aa15.2■□□□□ 0.02
PRKN-210ENST00000612540 DHX36Q9H2U1 1008 aaKnown RBP15.2■□□□□ 0.02
PRKN-210ENST00000612540 RNF41Q9H4P4 317 aaPredicted RBP15.2■□□□□ 0.02
PRKN-210ENST00000612540 TSHZ2Q9NRE2 1034 aa15.2■□□□□ 0.02
PRKN-210ENST00000612540 COL2A1P02458 1487 aaPredicted RBP15.2■□□□□ 0.02
PRKN-210ENST00000612540 DDTLA6NHG4 134 aaPredicted RBP15.19■□□□□ 0.02
PRKN-210ENST00000612540 E7EWF7 191 aa15.19■□□□□ 0.02
PRKN-210ENST00000612540 HSPA8P11142 646 aaKnown RBP15.19■□□□□ 0.02
PRKN-210ENST00000612540 PLCD1P51178 756 aa15.19■□□□□ 0.02
PRKN-210ENST00000612540 RASA3Q14644 834 aa15.19■□□□□ 0.02
PRKN-210ENST00000612540 AKNAD1Q5T1N1 836 aa15.19■□□□□ 0.02
PRKN-210ENST00000612540 CYP4F22Q6NT55 531 aa15.19■□□□□ 0.02
PRKN-210ENST00000612540 MFSD6Q6ZSS7 791 aa15.19■□□□□ 0.02
PRKN-210ENST00000612540 STOX1Q6ZVD7 989 aa15.19■□□□□ 0.02
PRKN-210ENST00000612540 FAM83AQ86UY5 434 aa15.19■□□□□ 0.02
PRKN-210ENST00000612540 KCNB2Q92953 911 aa15.19■□□□□ 0.02
PRKN-210ENST00000612540 DYNLL2Q96FJ2 89 aa15.19■□□□□ 0.02
PRKN-210ENST00000612540 CSRNP1Q96S65 589 aa15.19■□□□□ 0.02
PRKN-210ENST00000612540 GLIS2Q9BZE0 524 aaPredicted RBP15.19■□□□□ 0.02
PRKN-210ENST00000612540 ANAPC4Q9UJX5 808 aa15.19■□□□□ 0.02
PRKN-210ENST00000612540 NEDD4P46934 1319 aa15.18■□□□□ 0.02
PRKN-210ENST00000612540 PRDM1O75626 825 aa15.18■□□□□ 0.02
PRKN-210ENST00000612540 CASTP20810 708 aaKnown RBP15.18■□□□□ 0.02
PRKN-210ENST00000612540 PSMA5P28066 241 aa15.18■□□□□ 0.02
PRKN-210ENST00000612540 ECE1P42892 770 aa15.18■□□□□ 0.02
PRKN-210ENST00000612540 PDE4BQ07343 736 aa15.18■□□□□ 0.02
PRKN-210ENST00000612540 ADCK5Q3MIX3 580 aa15.18■□□□□ 0.02
PRKN-210ENST00000612540 SH3BP5LQ7L8J4 393 aa15.18■□□□□ 0.02
PRKN-210ENST00000612540 SULF1Q8IWU6 871 aa15.18■□□□□ 0.02
PRKN-210ENST00000612540 SLC44A5Q8NCS7 719 aa15.18■□□□□ 0.02
PRKN-210ENST00000612540 STAG1Q8WVM7 1258 aa15.18■□□□□ 0.02
PRKN-210ENST00000612540 DEFB129Q9H1M3 183 aa15.18■□□□□ 0.02
PRKN-210ENST00000612540 ATRNL1Q5VV63 1379 aa15.18■□□□□ 0.02
PRKN-210ENST00000612540 ROBO3Q96MS0 1386 aa15.18■□□□□ 0.02
PRKN-210ENST00000612540 PITPNM2Q9BZ72 1349 aa15.17■□□□□ 0.02
PRKN-210ENST00000612540 CELF2O95319 508 aaKnown RBP15.17■□□□□ 0.02
PRKN-210ENST00000612540 TSGA10IPQ3SY00 556 aa15.17■□□□□ 0.02
PRKN-210ENST00000612540 BLOC1S2Q6QNY1 142 aa15.17■□□□□ 0.02
PRKN-210ENST00000612540 SAPCD2Q86UD0 394 aa15.17■□□□□ 0.02
PRKN-210ENST00000612540 NCOA7Q8NI08 942 aa15.17■□□□□ 0.02
PRKN-210ENST00000612540 NEK1Q96PY6 1258 aa15.17■□□□□ 0.02
PRKN-210ENST00000612540 UPF3BQ9BZI7 483 aaKnown RBP15.17■□□□□ 0.02
PRKN-210ENST00000612540 CNNM2Q9H8M5 875 aa15.17■□□□□ 0.02
PRKN-210ENST00000612540 MKNK2Q9HBH9 465 aa15.17■□□□□ 0.02
PRKN-210ENST00000612540 INCENPQ9NQS7 918 aa15.17■□□□□ 0.02
PRKN-210ENST00000612540 PI4KBQ9UBF8 816 aa15.17■□□□□ 0.02
PRKN-210ENST00000612540 SERPINB13Q9UIV8 391 aa15.17■□□□□ 0.02
PRKN-210ENST00000612540 FAM196BA6NMK8 535 aa15.16■□□□□ 0.02
PRKN-210ENST00000612540 B4E1Z4 1266 aa15.16■□□□□ 0.02
PRKN-210ENST00000612540 RANBP6O60518 1105 aaKnown RBP15.16■□□□□ 0.02
PRKN-210ENST00000612540 CPA1P15085 419 aa15.16■□□□□ 0.02
PRKN-210ENST00000612540 RABEP1Q15276 862 aa15.16■□□□□ 0.02
PRKN-210ENST00000612540 C16orf86Q6ZW13 317 aa15.16■□□□□ 0.02
PRKN-210ENST00000612540 CDC37L1Q7L3B6 337 aa15.16■□□□□ 0.02
PRKN-210ENST00000612540 KRT26Q7Z3Y9 468 aa15.16■□□□□ 0.02
PRKN-210ENST00000612540 CDAN1Q8IWY9 1227 aa15.16■□□□□ 0.02
PRKN-210ENST00000612540 KRT23Q9C075 422 aa15.16■□□□□ 0.02
PRKN-210ENST00000612540 ZNF287Q9HBT7 754 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms