RNA–Protein interactions for RNA: ENST00000612349.1

SMAD6-205, Transcript of SMAD family member 6, humanhuman

Gene SMAD6, Length 5,198 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-205ENST00000612349 CDAN1Q8IWY9 1227 aa23.29■■□□□ 1.32
SMAD6-205ENST00000612349 KRT222Q8N1A0 295 aa23.29■■□□□ 1.32
SMAD6-205ENST00000612349 KCNQ3O43525 872 aa23.29■■□□□ 1.32
SMAD6-205ENST00000612349 GTF2F1P35269 517 aaKnown RBP eCLIP23.29■■□□□ 1.32
SMAD6-205ENST00000612349 SNX16P57768 344 aa23.29■■□□□ 1.32
SMAD6-205ENST00000612349 CALCOCO2Q13137 446 aa23.29■■□□□ 1.32
SMAD6-205ENST00000612349 MAPKAPK5Q8IW41 473 aa23.29■■□□□ 1.32
SMAD6-205ENST00000612349 ZNF569Q5MCW4 686 aa23.28■■□□□ 1.32
SMAD6-205ENST00000612349 GIMAP7Q8NHV1 300 aa23.28■■□□□ 1.32
SMAD6-205ENST00000612349 CSRNP2Q9H175 543 aa23.28■■□□□ 1.32
SMAD6-205ENST00000612349 METP08581 1390 aa23.28■■□□□ 1.32
SMAD6-205ENST00000612349 CCDC24Q8N4L8 307 aa23.28■■□□□ 1.32
SMAD6-205ENST00000612349 NAP1L3Q99457 506 aaPredicted RBP23.28■■□□□ 1.32
SMAD6-205ENST00000612349 TEKT1Q969V4 418 aa23.28■■□□□ 1.32
SMAD6-205ENST00000612349 NCOA5Q9HCD5 579 aaKnown RBP23.28■■□□□ 1.32
SMAD6-205ENST00000612349 LZTFL1Q9NQ48 299 aa23.28■■□□□ 1.32
SMAD6-205ENST00000612349 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.28■■□□□ 1.32
SMAD6-205ENST00000612349 DNM3Q9UQ16 869 aa23.28■■□□□ 1.32
SMAD6-205ENST00000612349 TFAP4Q01664 338 aa23.28■■□□□ 1.32
SMAD6-205ENST00000612349 MCTP2Q6DN12 878 aa23.28■■□□□ 1.32
SMAD6-205ENST00000612349 SNX29Q8TEQ0 813 aa23.28■■□□□ 1.32
SMAD6-205ENST00000612349 CEP63Q96MT8 703 aa23.28■■□□□ 1.32
SMAD6-205ENST00000612349 BAG1Q99933 345 aaPredicted RBP23.28■■□□□ 1.32
SMAD6-205ENST00000612349 AZI2Q9H6S1 392 aa23.28■■□□□ 1.32
SMAD6-205ENST00000612349 SEL1L2Q5TEA6 688 aa23.27■■□□□ 1.32
SMAD6-205ENST00000612349 PPIP5K2O43314 1243 aa23.27■■□□□ 1.32
SMAD6-205ENST00000612349 MRPS9P82933 396 aaKnown RBP23.27■■□□□ 1.32
SMAD6-205ENST00000612349 ZYXQ15942 572 aaKnown RBP23.27■■□□□ 1.32
SMAD6-205ENST00000612349 ARFGAP2Q8N6H7 521 aa23.27■■□□□ 1.32
SMAD6-205ENST00000612349 FBF1Q8TES7 1133 aa23.27■■□□□ 1.32
SMAD6-205ENST00000612349 CCDC122Q5T0U0 273 aa23.27■■□□□ 1.32
SMAD6-205ENST00000612349 CSGALNACT2Q8N6G5 542 aa23.27■■□□□ 1.32
SMAD6-205ENST00000612349 CHURC1Q8WUH1 139 aa23.27■■□□□ 1.32
SMAD6-205ENST00000612349 NOX5Q96PH1 765 aa23.27■■□□□ 1.32
SMAD6-205ENST00000612349 BLMP54132 1417 aaPredicted RBP23.27■■□□□ 1.32
SMAD6-205ENST00000612349 TMEM94Q12767 1356 aa23.27■■□□□ 1.32
SMAD6-205ENST00000612349 H7C1D1 291 aa23.27■■□□□ 1.31
SMAD6-205ENST00000612349 HARSP12081 509 aaKnown RBP23.27■■□□□ 1.31
SMAD6-205ENST00000612349 MYCLP12524 364 aaPredicted RBP23.27■■□□□ 1.31
SMAD6-205ENST00000612349 TNFAIP3P21580 790 aa23.27■■□□□ 1.31
SMAD6-205ENST00000612349 ARID4AP29374 1257 aaPredicted RBP23.27■■□□□ 1.31
SMAD6-205ENST00000612349 TRPC3Q13507 836 aa23.27■■□□□ 1.31
SMAD6-205ENST00000612349 MCM6Q14566 821 aa23.27■■□□□ 1.31
SMAD6-205ENST00000612349 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.27■■□□□ 1.31
SMAD6-205ENST00000612349 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.26■■□□□ 1.31
SMAD6-205ENST00000612349 TGFBRAP1Q8WUH2 860 aa23.26■■□□□ 1.31
SMAD6-205ENST00000612349 CTNND2Q9UQB3 1225 aa23.26■■□□□ 1.31
SMAD6-205ENST00000612349 ATP2B4P23634 1241 aa23.26■■□□□ 1.31
SMAD6-205ENST00000612349 KRT40Q6A162 431 aa23.26■■□□□ 1.31
SMAD6-205ENST00000612349 ARL1P40616 181 aaPredicted RBP23.26■■□□□ 1.31
SMAD6-205ENST00000612349 CTDSPL2Q05D32 466 aa23.26■■□□□ 1.31
SMAD6-205ENST00000612349 NSMFQ6X4W1 530 aa23.26■■□□□ 1.31
SMAD6-205ENST00000612349 NUP58Q9BVL2 599 aa23.26■■□□□ 1.31
SMAD6-205ENST00000612349 ABCA8O94911 1581 aa23.26■■□□□ 1.31
SMAD6-205ENST00000612349 PLEKHG1Q9ULL1 1385 aa23.26■■□□□ 1.31
SMAD6-205ENST00000612349 KRT5P13647 590 aa23.26■■□□□ 1.31
SMAD6-205ENST00000612349 NCAPH2Q6IBW4 605 aa23.26■■□□□ 1.31
SMAD6-205ENST00000612349 MAK16Q9BXY0 300 aaKnown RBP23.26■■□□□ 1.31
SMAD6-205ENST00000612349 KARSQ15046 597 aaKnown RBP23.25■■□□□ 1.31
SMAD6-205ENST00000612349 DNAJC5Q9H3Z4 198 aa23.25■■□□□ 1.31
SMAD6-205ENST00000612349 ZNF408Q9H9D4 720 aa23.25■■□□□ 1.31
SMAD6-205ENST00000612349 CFAP74Q9C0B2 1584 aa23.25■■□□□ 1.31
SMAD6-205ENST00000612349 MFSD14BQ5SR56 506 aa23.25■■□□□ 1.31
SMAD6-205ENST00000612349 KDRP35968 1356 aa23.25■■□□□ 1.31
SMAD6-205ENST00000612349 CPXCR1Q8N123 301 aa23.25■■□□□ 1.31
SMAD6-205ENST00000612349 REXO1Q8N1G1 1221 aaKnown RBP23.25■■□□□ 1.31
SMAD6-205ENST00000612349 IGSF22Q8N9C0 903 aa23.25■■□□□ 1.31
SMAD6-205ENST00000612349 SSH3Q8TE77 659 aa23.25■■□□□ 1.31
SMAD6-205ENST00000612349 MYO5CQ9NQX4 1742 aa23.25■■□□□ 1.31
SMAD6-205ENST00000612349 NDC80O14777 642 aa23.25■■□□□ 1.31
SMAD6-205ENST00000612349 POLR2DO15514 142 aaKnown RBP23.25■■□□□ 1.31
SMAD6-205ENST00000612349 PPP1R7Q15435 360 aa23.25■■□□□ 1.31
SMAD6-205ENST00000612349 TTC16Q8NEE8 873 aa23.25■■□□□ 1.31
SMAD6-205ENST00000612349 LEO1Q8WVC0 666 aaPredicted RBP23.25■■□□□ 1.31
SMAD6-205ENST00000612349 PCCAP05165 728 aaPredicted RBP23.24■■□□□ 1.31
SMAD6-205ENST00000612349 HERC4Q5GLZ8 1057 aaPredicted RBP23.24■■□□□ 1.31
SMAD6-205ENST00000612349 ZBTB38Q8NAP3 1195 aaPredicted RBP23.24■■□□□ 1.31
SMAD6-205ENST00000612349 USP44Q9H0E7 712 aa23.24■■□□□ 1.31
SMAD6-205ENST00000612349 CLSTN2Q9H4D0 955 aa23.24■■□□□ 1.31
SMAD6-205ENST00000612349 HSPA4P34932 840 aa23.24■■□□□ 1.31
SMAD6-205ENST00000612349 DNM2P50570 870 aa23.24■■□□□ 1.31
SMAD6-205ENST00000612349 PAK1Q13153 545 aa23.24■■□□□ 1.31
SMAD6-205ENST00000612349 PPP1R9BQ96SB3 815 aa23.24■■□□□ 1.31
SMAD6-205ENST00000612349 EFCAB6Q5THR3 1501 aa23.24■■□□□ 1.31
SMAD6-205ENST00000612349 LIN9Q5TKA1 542 aa23.24■■□□□ 1.31
SMAD6-205ENST00000612349 PAIP2Q9BPZ3 127 aaKnown RBP23.24■■□□□ 1.31
SMAD6-205ENST00000612349 USP40Q9NVE5 1235 aa23.24■■□□□ 1.31
SMAD6-205ENST00000612349 NDUFB9Q9Y6M9 179 aa23.24■■□□□ 1.31
SMAD6-205ENST00000612349 FAM169AQ9Y6X4 670 aa23.24■■□□□ 1.31
SMAD6-205ENST00000612349 TRERF1Q96PN7 1200 aa23.24■■□□□ 1.31
SMAD6-205ENST00000612349 IRX3P78415 501 aaPredicted RBP23.23■■□□□ 1.31
SMAD6-205ENST00000612349 TCP10Q12799 353 aa23.23■■□□□ 1.31
SMAD6-205ENST00000612349 CALCRLQ16602 461 aa23.23■■□□□ 1.31
SMAD6-205ENST00000612349 CEP128Q6ZU80 1094 aa23.23■■□□□ 1.31
SMAD6-205ENST00000612349 TTF2Q9UNY4 1162 aaKnown RBP23.23■■□□□ 1.31
SMAD6-205ENST00000612349 ADGBQ8N7X0 1667 aa23.23■■□□□ 1.31
SMAD6-205ENST00000612349 GTF2IP78347 998 aa23.23■■□□□ 1.31
SMAD6-205ENST00000612349 PNMA2Q9UL42 364 aa23.23■■□□□ 1.31
SMAD6-205ENST00000612349 PPARAQ07869 468 aa23.23■■□□□ 1.31
SMAD6-205ENST00000612349 CCDC26Q8TAB7 109 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms