RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 METP08581 1390 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 RFC1P35251 1148 aaPredicted RBP10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 CYLC1P35663 651 aaPredicted RBP10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 PARP3Q9Y6F1 533 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 SGSM2O43147 1006 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 TSC22D1Q15714 1073 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 ZBTB9Q96C00 473 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 PRDM10Q9NQV6 1147 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 CCDC174Q6PII3 467 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 MBD5Q9P267 1494 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 PDE8AO60658 829 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 TBCAO75347 108 aaKnown RBP10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 UFL1O94874 794 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 RPS6KB1P23443 525 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 SEPT14Q6ZU15 432 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 HELLSQ9NRZ9 838 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 PUM3Q15397 648 aaKnown RBP10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 CC2D2BQ6DHV5 1058 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 NCAPGQ9BPX3 1015 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 TRIM55Q9BYV6 548 aa10.6□□□□□ -0.71
SRGAP2B-204ENST00000612199 GIGYF1O75420 1035 aaPredicted RBP10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 ANKRD35Q8N283 1001 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 CCDC114Q96M63 670 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 TAOK3Q9H2K8 898 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 HARSP12081 509 aaKnown RBP10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 SPAG5Q96R06 1193 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 RTL9Q8NET4 1388 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 SPATA31E1Q6ZUB1 1445 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 ZAP70P43403 619 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 TTLL7Q6ZT98 887 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 TACC3Q9Y6A5 838 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 CHMP2AO43633 222 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 SMARCC2Q8TAQ2 1214 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 POLR3GO15318 223 aaPredicted RBP10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 NEUROD4Q9HD90 331 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 JADE2Q9NQC1 790 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 CALCOCO1Q9P1Z2 691 aa10.59□□□□□ -0.71
SRGAP2B-204ENST00000612199 BLMP54132 1417 aaPredicted RBP10.58□□□□□ -0.71
SRGAP2B-204ENST00000612199 NEURL1BA8MQ27 555 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 NOL3O60936 208 aaKnown RBP10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 HIBADHP31937 336 aaKnown RBP10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 PLCB4Q15147 1175 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 IFI16Q16666 785 aaKnown RBP10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 SPECC1Q5M775 1068 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 C1orf228Q6PIY5 440 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 ANKRD2Q9GZV1 360 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 AATFQ9NY61 560 aaKnown RBP eCLIP10.58□□□□□ -0.722e-7■□□□□ 8.5
SRGAP2B-204ENST00000612199 SPDYE1Q8NFV5 336 aaPredicted RBP10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 ZFP91Q96JP5 570 aaPredicted RBP10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 KRT2P35908 639 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 TEX11Q8IYF3 940 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 STMN2Q93045 179 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 FAM107BQ9H098 131 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 TXNDC16Q9P2K2 825 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 CKAP4Q07065 602 aaKnown RBP10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 HLTFQ14527 1009 aaKnown RBP eCLIP10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 ZNF174Q15697 407 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 TBCCQ15814 346 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 PKNOX2Q96KN3 472 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 DNAI1Q9UI46 699 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 ABT1Q9ULW3 272 aaKnown RBP10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 FRMD4BQ9Y2L6 1034 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 hCG_1642624A0A1W2PR95 340 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 PLCG2P16885 1265 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 CTDSPL2Q05D32 466 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 PPP1R21Q6ZMI0 780 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 KBTBD3Q8NAB2 608 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 RDH13Q8NBN7 331 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 RRP36Q96EU6 259 aaKnown RBP10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 YIPF2Q9BWQ6 316 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 C6orf50Q9HD87 102 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 VWA3AA6NCI4 1184 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 APPBP2Q92624 585 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 CCDC87Q9NVE4 849 aa10.58□□□□□ -0.72
SRGAP2B-204ENST00000612199 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 CTAGE15A4D2H0 777 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 GCOM1H8Y6P7 765 aaPredicted RBP10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 MYZAPP0CAP1 466 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 CTAGE8P0CG41 777 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 CTAGE6Q86UF2 777 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 CTAGE4Q8IX94 777 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 BAG1Q99933 345 aaPredicted RBP10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 PPANQ9NQ55 473 aaKnown RBP10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 PRDM5Q9NQX1 630 aaPredicted RBP10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 DAPK3O43293 454 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 GSPT1P15170 499 aaKnown RBP10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 PHKBQ93100 1093 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 FAM169AQ9Y6X4 670 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 DNAJC7Q99615 494 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 GPCPD1Q9NPB8 672 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 DENND2AQ9ULE3 1009 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 PARP10Q53GL7 1025 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 NANOGNBQ7Z5D8 188 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 RYBPQ8N488 228 aaPredicted RBP10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 EEF2P13639 858 aaKnown RBP10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 PHKG2P15735 406 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 ATP1A2P50993 1020 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 GSTA5Q7RTV2 222 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 ATP6V1E2Q96A05 226 aa10.57□□□□□ -0.72
SRGAP2B-204ENST00000612199 KIAA0232Q92628 1395 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms