RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 USP17L3A6NCW0 530 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 USP17L4A6NCW7 530 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 SMIM22K7EJ46 135 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 ZNF213O14771 459 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 BTDP43251 543 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 CTDSPL2Q05D32 466 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 CXCL9Q07325 125 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 DACT2Q5SW24 774 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 TMED8Q6PL24 325 aaPredicted RBP9.59□□□□□ -0.87
TARDBP-213ENST00000611963 USP17L1Q7RTZ2 530 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 NIM1KQ8IY84 436 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 STK11IPQ8N1F8 1099 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 NKX2-3Q8TAU0 364 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 FAM163AQ96GL9 167 aaPredicted RBP9.59□□□□□ -0.87
TARDBP-213ENST00000611963 TMX3Q96JJ7 454 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 NOL10Q9BSC4 688 aaKnown RBP9.59□□□□□ -0.87
TARDBP-213ENST00000611963 TMEM121BQ9BXQ6 578 aaPredicted RBP9.59□□□□□ -0.87
TARDBP-213ENST00000611963 NACAP1Q9BZK3 213 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 VPS33BQ9H267 617 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 INCENPQ9NQS7 918 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 TTF2Q9UNY4 1162 aaKnown RBP9.59□□□□□ -0.87
TARDBP-213ENST00000611963 DAGLAQ9Y4D2 1042 aa9.59□□□□□ -0.87
TARDBP-213ENST00000611963 GAKO14976 1311 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 NEDD4P46934 1319 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 MINDY4BA8MYZ0 360 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 IGSF3O75054 1194 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 RAD17O75943 681 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 LARGE1O95461 756 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 HSP90AA1P07900 732 aaKnown RBP9.58□□□□□ -0.88
TARDBP-213ENST00000611963 CYP2D6P10635 497 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 EPHX2P34913 555 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 MCM2P49736 904 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 EIF6P56537 245 aaKnown RBP9.58□□□□□ -0.88
TARDBP-213ENST00000611963 PPP4CP60510 307 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 TOB2Q14106 344 aaPredicted RBP9.58□□□□□ -0.88
TARDBP-213ENST00000611963 STRIP1Q5VSL9 837 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 CHST3Q7LGC8 479 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 LDHDQ86WU2 507 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 MB21D2Q8IYB1 491 aaPredicted RBP9.58□□□□□ -0.88
TARDBP-213ENST00000611963 DCP1AQ9NPI6 582 aaPredicted RBP9.58□□□□□ -0.88
TARDBP-213ENST00000611963 HACL1Q9UJ83 578 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 ZNRF3Q9ULT6 936 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 SUGT1Q9Y2Z0 365 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 GJA3Q9Y6H8 435 aa9.58□□□□□ -0.88
TARDBP-213ENST00000611963 GPR75-ASB3A0A0A6YYF3 556 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 PSMD14O00487 310 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 BAG3O95817 575 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 EPS15P42566 896 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 USP5P45974 858 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 FKBP1AP62942 108 aaKnown RBP9.57□□□□□ -0.88
TARDBP-213ENST00000611963 EXOSC10Q01780 885 aaKnown RBP9.57□□□□□ -0.88
TARDBP-213ENST00000611963 PPARAQ07869 468 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 SLC4A8Q2Y0W8 1093 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 CTR9Q6PD62 1173 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 Q6ZUG5 572 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 DHX32Q7L7V1 743 aaKnown RBP9.57□□□□□ -0.88
TARDBP-213ENST00000611963 RALYLQ86SE5 291 aaKnown RBP9.57□□□□□ -0.88
TARDBP-213ENST00000611963 KIAA0825Q8IV33 1275 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 SLF2Q8IX21 1173 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 TEX11Q8IYF3 940 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 TGFBRAP1Q8WUH2 860 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 GPHNQ9NQX3 736 aaPredicted RBP9.57□□□□□ -0.88
TARDBP-213ENST00000611963 TPCN1Q9ULQ1 816 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 LIMCH1Q9UPQ0 1083 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 PCDHAC2Q9Y5I4 1007 aa9.57□□□□□ -0.88
TARDBP-213ENST00000611963 B4E1Z4 1266 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 USP17L12C9JPN9 530 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 USP17L21D6R901 530 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 PRC1O43663 620 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 ITGBL1O95965 494 aaPredicted RBP9.56□□□□□ -0.88
TARDBP-213ENST00000611963 HMGB1P09429 215 aaKnown RBP9.56□□□□□ -0.88
TARDBP-213ENST00000611963 USP17L8P0C7I0 530 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 CRKP46108 304 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 ANTXR2P58335 489 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 RHBDL3P58872 404 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 CUL4AQ13619 759 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 EAPPQ56P03 285 aaPredicted RBP9.56□□□□□ -0.88
TARDBP-213ENST00000611963 RRP12Q5JTH9 1297 aaKnown RBP9.56□□□□□ -0.88
TARDBP-213ENST00000611963 AKNAD1Q5T1N1 836 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 GIMAP6Q6P9H5 292 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 CYB5R4Q7L1T6 521 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 MAPKAPK5Q8IW41 473 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 NCOA7Q8NI08 942 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 STAG1Q8WVM7 1258 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 TEKT1Q969V4 418 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 KLRG1Q96E93 195 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 ATP8A2Q9NTI2 1148 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 SAP30BPQ9UHR5 308 aaKnown RBP9.56□□□□□ -0.88
TARDBP-213ENST00000611963 PASKQ96RG2 1323 aa9.56□□□□□ -0.88
TARDBP-213ENST00000611963 DTNBO60941 627 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 FGD1P98174 961 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 APOBRQ0VD83 1088 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 ST3GAL1Q11201 340 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 TRDNQ13061 729 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 ANKRD1Q15327 319 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 ME3Q16798 604 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 LCE2DQ5TA82 110 aaPredicted RBP9.55□□□□□ -0.88
TARDBP-213ENST00000611963 CIAPIN1Q6FI81 312 aa9.55□□□□□ -0.88
TARDBP-213ENST00000611963 RSBN1LQ6PCB5 846 aaPredicted RBP9.55□□□□□ -0.88
TARDBP-213ENST00000611963 MFSD6Q6ZSS7 791 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms