RNA–Protein interactions for RNA: ENST00000611795.1

SCFD2-204, Transcript of sec1 family domain containing 2, humanhuman

TSL 5 BASIC

Gene SCFD2, Length 1,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-204ENST00000611795 PRAMEF18Q5VWM3 479 aa22.58■■□□□ 1.21
SCFD2-204ENST00000611795 TTC6Q86TZ1 520 aa22.58■■□□□ 1.21
SCFD2-204ENST00000611795 ZSCAN29Q8IWY8 852 aaPredicted RBP22.58■■□□□ 1.21
SCFD2-204ENST00000611795 STK11IPQ8N1F8 1099 aa22.58■■□□□ 1.21
SCFD2-204ENST00000611795 DCPSQ96C86 337 aaKnown RBP22.58■■□□□ 1.21
SCFD2-204ENST00000611795 DNAJC18Q9H819 358 aa22.58■■□□□ 1.21
SCFD2-204ENST00000611795 E7EWF7 191 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 FGRP09769 529 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 ADCK5Q3MIX3 580 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 RNF20Q5VTR2 975 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 METTL16Q86W50 562 aaKnown RBP22.57■■□□□ 1.2
SCFD2-204ENST00000611795 SLC44A5Q8NCS7 719 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 STAG1Q8WVM7 1258 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 CSRNP1Q96S65 589 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 EHD4Q9H223 541 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 PI4KBQ9UBF8 816 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.57■■□□□ 1.2
SCFD2-204ENST00000611795 SSC5DA1L4H1 1573 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 NEDD4P46934 1319 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 HLA-DOAP06340 250 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 AKNAD1Q5T1N1 836 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 NBPF12Q5TAG4 269 aaPredicted RBP22.57■■□□□ 1.2
SCFD2-204ENST00000611795 C16orf86Q6ZW13 317 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 KRT26Q7Z3Y9 468 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 AMOTL1Q8IY63 956 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 PPP2R3BQ9Y5P8 575 aa22.57■■□□□ 1.2
SCFD2-204ENST00000611795 FAM196BA6NMK8 535 aa22.56■■□□□ 1.2
SCFD2-204ENST00000611795 ANAPC15P60006 121 aa22.56■■□□□ 1.2
SCFD2-204ENST00000611795 USP48Q86UV5 1035 aa22.56■■□□□ 1.2
SCFD2-204ENST00000611795 LDHDQ86WU2 507 aa22.56■■□□□ 1.2
SCFD2-204ENST00000611795 SULF1Q8IWU6 871 aa22.56■■□□□ 1.2
SCFD2-204ENST00000611795 GLIS2Q9BZE0 524 aaPredicted RBP22.56■■□□□ 1.2
SCFD2-204ENST00000611795 SERPINB13Q9UIV8 391 aa22.56■■□□□ 1.2
SCFD2-204ENST00000611795 CLEC11AQ9Y240 323 aa22.56■■□□□ 1.2
SCFD2-204ENST00000611795 ZKSCAN1P17029 563 aaPredicted RBP22.55■■□□□ 1.2
SCFD2-204ENST00000611795 CDK8P49336 464 aa22.55■■□□□ 1.2
SCFD2-204ENST00000611795 MAP1SQ66K74 1059 aaPredicted RBP22.55■■□□□ 1.2
SCFD2-204ENST00000611795 KIF3CO14782 793 aa22.54■■□□□ 1.2
SCFD2-204ENST00000611795 SHMT1P34896 483 aa22.54■■□□□ 1.2
SCFD2-204ENST00000611795 MAP3K10Q02779 954 aa22.54■■□□□ 1.2
SCFD2-204ENST00000611795 FOXP4Q8IVH2 680 aaPredicted RBP22.54■■□□□ 1.2
SCFD2-204ENST00000611795 GPBP1L1Q9HC44 474 aaPredicted RBP22.54■■□□□ 1.2
SCFD2-204ENST00000611795 ORC4O43929 436 aa22.53■■□□□ 1.2
SCFD2-204ENST00000611795 PRDM1O75626 825 aa22.53■■□□□ 1.2
SCFD2-204ENST00000611795 SLC3A2P08195 630 aaKnown RBP22.52■■□□□ 1.2
SCFD2-204ENST00000611795 RASA1P20936 1047 aa22.52■■□□□ 1.2
SCFD2-204ENST00000611795 RRP1BQ14684 758 aaKnown RBP22.52■■□□□ 1.2
SCFD2-204ENST00000611795 MFSD6Q6ZSS7 791 aa22.52■■□□□ 1.2
SCFD2-204ENST00000611795 CDC37L1Q7L3B6 337 aa22.52■■□□□ 1.2
SCFD2-204ENST00000611795 MIGA2Q7L4E1 593 aa22.52■■□□□ 1.2
SCFD2-204ENST00000611795 MB21D2Q8IYB1 491 aaPredicted RBP22.52■■□□□ 1.2
SCFD2-204ENST00000611795 JAKMIP1Q96N16 626 aaKnown RBP22.52■■□□□ 1.2
SCFD2-204ENST00000611795 RNF41Q9H4P4 317 aaPredicted RBP22.52■■□□□ 1.2
SCFD2-204ENST00000611795 B4E1Z4 1266 aa22.51■■□□□ 1.19
SCFD2-204ENST00000611795 TBC1D12O60347 775 aa22.51■■□□□ 1.19
SCFD2-204ENST00000611795 CPA1P15085 419 aa22.51■■□□□ 1.19
SCFD2-204ENST00000611795 YY1P25490 414 aa22.51■■□□□ 1.19
SCFD2-204ENST00000611795 KRT32Q14532 448 aa22.51■■□□□ 1.19
SCFD2-204ENST00000611795 CRACR2BQ8N4Y2 399 aaPredicted RBP22.51■■□□□ 1.19
SCFD2-204ENST00000611795 CDCA5Q96FF9 252 aa22.51■■□□□ 1.19
SCFD2-204ENST00000611795 SWAP70Q9UH65 585 aa22.51■■□□□ 1.19
SCFD2-204ENST00000611795 HERC5Q9UII4 1024 aaKnown RBP22.51■■□□□ 1.19
SCFD2-204ENST00000611795 TRAF5O00463 557 aa22.5■■□□□ 1.19
SCFD2-204ENST00000611795 PCP11498 1178 aaKnown RBP22.5■■□□□ 1.19
SCFD2-204ENST00000611795 FMR1Q06787 632 aaKnown RBP eCLIP22.5■■□□□ 1.19
SCFD2-204ENST00000611795 PDE4BQ07343 736 aa22.5■■□□□ 1.19
SCFD2-204ENST00000611795 RRP12Q5JTH9 1297 aaKnown RBP22.5■■□□□ 1.19
SCFD2-204ENST00000611795 TATDN1Q6P1N9 297 aa22.5■■□□□ 1.19
SCFD2-204ENST00000611795 CYB5R4Q7L1T6 521 aa22.5■■□□□ 1.19
SCFD2-204ENST00000611795 NEK1Q96PY6 1258 aa22.5■■□□□ 1.19
SCFD2-204ENST00000611795 TM6SF1Q9BZW5 370 aa22.5■■□□□ 1.19
SCFD2-204ENST00000611795 TAOK2Q9UL54 1235 aa22.5■■□□□ 1.19
SCFD2-204ENST00000611795 ANTXR2P58335 489 aa22.49■■□□□ 1.19
SCFD2-204ENST00000611795 SHROOM1Q2M3G4 852 aaPredicted RBP22.49■■□□□ 1.19
SCFD2-204ENST00000611795 NCOA7Q8NI08 942 aa22.49■■□□□ 1.19
SCFD2-204ENST00000611795 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.49■■□□□ 1.19
SCFD2-204ENST00000611795 ZSWIM6Q9HCJ5 1215 aa22.49■■□□□ 1.19
SCFD2-204ENST00000611795 FZD1Q9UP38 647 aa22.49■■□□□ 1.19
SCFD2-204ENST00000611795 MYH8P13535 1937 aa22.49■■□□□ 1.19
SCFD2-204ENST00000611795 PHF20L1A8MW92 1017 aa22.48■■□□□ 1.19
SCFD2-204ENST00000611795 KDM4AO75164 1064 aa22.48■■□□□ 1.19
SCFD2-204ENST00000611795 CASTP20810 708 aaKnown RBP22.48■■□□□ 1.19
SCFD2-204ENST00000611795 JAG1P78504 1218 aa22.48■■□□□ 1.19
SCFD2-204ENST00000611795 FAM47AQ5JRC9 791 aa22.48■■□□□ 1.19
SCFD2-204ENST00000611795 CHADLQ6NUI6 762 aa22.48■■□□□ 1.19
SCFD2-204ENST00000611795 UPF3BQ9BZI7 483 aaKnown RBP22.48■■□□□ 1.19
SCFD2-204ENST00000611795 KRT23Q9C075 422 aa22.48■■□□□ 1.19
SCFD2-204ENST00000611795 CNNM2Q9H8M5 875 aa22.48■■□□□ 1.19
SCFD2-204ENST00000611795 MKNK2Q9HBH9 465 aa22.48■■□□□ 1.19
SCFD2-204ENST00000611795 TOMM22Q9NS69 142 aa22.48■■□□□ 1.19
SCFD2-204ENST00000611795 PAPPA2Q9BXP8 1791 aa22.47■■□□□ 1.19
SCFD2-204ENST00000611795 AKR1B1P15121 316 aa22.47■■□□□ 1.19
SCFD2-204ENST00000611795 EXOSC10Q01780 885 aaKnown RBP22.47■■□□□ 1.19
SCFD2-204ENST00000611795 SUPT20HL1Q3ZLR7 823 aa22.47■■□□□ 1.19
SCFD2-204ENST00000611795 ZNF784Q8NCA9 323 aaPredicted RBP22.47■■□□□ 1.19
SCFD2-204ENST00000611795 TSHZ2Q9NRE2 1034 aa22.47■■□□□ 1.19
SCFD2-204ENST00000611795 ZSWIM5Q9P217 1185 aa22.47■■□□□ 1.19
SCFD2-204ENST00000611795 GREB1LQ9C091 1923 aaPredicted RBP22.47■■□□□ 1.19
SCFD2-204ENST00000611795 RANBP6O60518 1105 aaKnown RBP22.46■■□□□ 1.19
SCFD2-204ENST00000611795 ITGBL1O95965 494 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms