RNA–Protein interactions for RNA: ENST00000611527.1

FGFR2-223, Transcript of fibroblast growth factor receptor 2, human

TSL 3 BASIC

Gene FGFR2, Length 435 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR2-223	ENST00000611527	CAP1	Q01518	475 aa		13.5	□□□□□ -0.25
FGFR2-223	ENST00000611527	CCL15	Q16663	113 aa		13.5	□□□□□ -0.25
FGFR2-223	ENST00000611527	TTC22	Q5TAA0	569 aa		13.5	□□□□□ -0.25
FGFR2-223	ENST00000611527	TEX11	Q8IYF3	940 aa		13.5	□□□□□ -0.25
FGFR2-223	ENST00000611527	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.5	□□□□□ -0.25
FGFR2-223	ENST00000611527	SIPA1L1	O43166	1804 aa		13.5	□□□□□ -0.25
FGFR2-223	ENST00000611527	CENPF	P49454	3210 aa		13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	ZSWIM8	A7E2V4	1837 aa		13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	TRIM6-TRIM34	B2RNG4	842 aa		13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	WDHD1	O75717	1129 aa	Predicted RBP	13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	BAG3	O95817	575 aa		13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	GSPT1	P15170	499 aa	Known RBP	13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	PLCG2	P16885	1265 aa		13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	RGS3	P49796	1198 aa		13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	PRPF38B	Q5VTL8	546 aa	Known RBP	13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	FKBP1C	Q5VVH2	108 aa		13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	ZSCAN25	Q6NSZ9	544 aa		13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	EVI5L	Q96CN4	794 aa		13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	WRNIP1	Q96S55	665 aa		13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	FAM198A	Q9UFP1	575 aa		13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	PTPN22	Q9Y2R2	807 aa		13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	SNCAIP	Q9Y6H5	919 aa		13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.49	□□□□□ -0.25
FGFR2-223	ENST00000611527	MAGEB6P1	A0A0J9YX57	407 aa		13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	SPDYE5	A6NIY4	337 aa		13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	MBD4	O95243	580 aa		13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	GTF2A2	P52657	109 aa		13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	PPP4C	P60510	307 aa		13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	SP3	Q02447	781 aa		13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	TCP10	Q12799	353 aa		13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	PICALM	Q13492	652 aa		13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	UBE3C	Q15386	1083 aa		13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	TAF1C	Q15572	869 aa	Predicted RBP	13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	FAM83A	Q86UY5	434 aa		13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	FAM43A	Q8N2R8	423 aa		13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	RIOK1	Q9BRS2	568 aa	Known RBP	13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	EFCC1	Q9HA90	598 aa		13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	DDX4	Q9NQI0	724 aa	Known RBP	13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	COL2A1	P02458	1487 aa	Predicted RBP	13.48	□□□□□ -0.25
FGFR2-223	ENST00000611527	FLT1	P17948	1338 aa		13.47	□□□□□ -0.25
FGFR2-223	ENST00000611527	POTEF	A5A3E0	1075 aa		13.47	□□□□□ -0.25
FGFR2-223	ENST00000611527	RNF113A	O15541	343 aa	Known RBP	13.47	□□□□□ -0.25
FGFR2-223	ENST00000611527	ZFY	P08048	801 aa	Predicted RBP	13.47	□□□□□ -0.25
FGFR2-223	ENST00000611527	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.47	□□□□□ -0.25
FGFR2-223	ENST00000611527	CERS3	Q8IU89	383 aa		13.47	□□□□□ -0.25
FGFR2-223	ENST00000611527	LCORL	Q8N3X6	602 aa		13.47	□□□□□ -0.25
FGFR2-223	ENST00000611527	APPBP2	Q92624	585 aa		13.47	□□□□□ -0.25
FGFR2-223	ENST00000611527	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.47	□□□□□ -0.25
FGFR2-223	ENST00000611527	RILPL2	Q969X0	211 aa		13.47	□□□□□ -0.25
FGFR2-223	ENST00000611527	IDI2	Q9BXS1	227 aa		13.47	□□□□□ -0.25
FGFR2-223	ENST00000611527	ENTPD3	O75355	529 aa		13.46	□□□□□ -0.25
FGFR2-223	ENST00000611527	ERO1B	Q86YB8	467 aa		13.46	□□□□□ -0.25
FGFR2-223	ENST00000611527	MAPKAPK5	Q8IW41	473 aa		13.46	□□□□□ -0.25
FGFR2-223	ENST00000611527	HOOK2	Q96ED9	719 aa		13.46	□□□□□ -0.25
FGFR2-223	ENST00000611527	ARMT1	Q9H993	441 aa		13.46	□□□□□ -0.25
FGFR2-223	ENST00000611527	ZFYVE28	Q9HCC9	887 aa		13.46	□□□□□ -0.25
FGFR2-223	ENST00000611527	KIAA0100	Q14667	2235 aa	Known RBP	13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	ATRNL1	Q5VV63	1379 aa		13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527		M0R2C6	588 aa		13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	IRF6	O14896	467 aa		13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	CETP	P11597	493 aa		13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	ZMYM1	Q5SVZ6	1142 aa		13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	DCAF15	Q66K64	600 aa		13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	MIGA2	Q7L4E1	593 aa		13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	ZFPM1	Q8IX07	1006 aa		13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	TGFBRAP1	Q8WUH2	860 aa		13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	FAM151A	Q8WW52	585 aa		13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	OSBP2	Q969R2	916 aa		13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	ARMC5	Q96C12	935 aa		13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	PUS7L	Q9H0K6	701 aa	Known RBP	13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.45	□□□□□ -0.26
FGFR2-223	ENST00000611527	MKI67	P46013	3256 aa	Known RBP	13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527		A0A0D9SFI3	127 aa		13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527	BTBD19	C9JJ37	291 aa		13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527	NPM3	O75607	178 aa	Known RBP	13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527	SDS	P20132	328 aa		13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527	INPP5B	P32019	993 aa		13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527	USP5	P45974	858 aa		13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527	PPIL2	Q13356	520 aa		13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527	SNAPC2	Q13487	334 aa		13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527	SEC62	Q99442	399 aa	Known RBP	13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527	ZNF341	Q9BYN7	854 aa		13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527	MYH8	P13535	1937 aa		13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527	BRCA2	P51587	3418 aa		13.44	□□□□□ -0.26
FGFR2-223	ENST00000611527	ATAD5	Q96QE3	1844 aa		13.43	□□□□□ -0.26
FGFR2-223	ENST00000611527	GPAA1	O43292	621 aa		13.43	□□□□□ -0.26
FGFR2-223	ENST00000611527	NMI	Q13287	307 aa	Predicted RBP	13.43	□□□□□ -0.26
FGFR2-223	ENST00000611527	DOCK1	Q14185	1865 aa		13.43	□□□□□ -0.26
FGFR2-223	ENST00000611527	SH3BP5L	Q7L8J4	393 aa		13.43	□□□□□ -0.26
FGFR2-223	ENST00000611527	SDR42E1	Q8WUS8	393 aa		13.43	□□□□□ -0.26
FGFR2-223	ENST00000611527	FAM227B	Q96M60	508 aa		13.43	□□□□□ -0.26
FGFR2-223	ENST00000611527	DIAPH3	Q9NSV4	1193 aa		13.43	□□□□□ -0.26
FGFR2-223	ENST00000611527	SAP30BP	Q9UHR5	308 aa	Known RBP	13.43	□□□□□ -0.26
FGFR2-223	ENST00000611527	PTCH2	Q9Y6C5	1203 aa		13.43	□□□□□ -0.26
FGFR2-223	ENST00000611527	LAMA4	Q16363	1823 aa		13.42	□□□□□ -0.26
FGFR2-223	ENST00000611527	DDTL	A6NHG4	134 aa	Predicted RBP	13.42	□□□□□ -0.26
FGFR2-223	ENST00000611527	PRKAB2	O43741	272 aa		13.42	□□□□□ -0.26
FGFR2-223	ENST00000611527	TLR2	O60603	784 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms