RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 MYO5AQ9Y4I1 1855 aaKnown RBP30.01■■■□□ 2.39
CDKN3-211ENST00000611205 COL2A1P02458 1487 aaPredicted RBP30■■■□□ 2.39
CDKN3-211ENST00000611205 CDK5RAP2Q96SN8 1893 aa30■■■□□ 2.39
CDKN3-211ENST00000611205 GJA8P48165 433 aa30■■■□□ 2.39
CDKN3-211ENST00000611205 TREML2Q5T2D2 321 aa30■■■□□ 2.39
CDKN3-211ENST00000611205 DPF3Q92784 378 aa30■■■□□ 2.39
CDKN3-211ENST00000611205 NOL10Q9BSC4 688 aaKnown RBP30■■■□□ 2.39
CDKN3-211ENST00000611205 ADCY3O60266 1144 aa29.99■■■□□ 2.39
CDKN3-211ENST00000611205 FLT3LGP49771 235 aa29.99■■■□□ 2.39
CDKN3-211ENST00000611205 TMEM57Q8N5G2 664 aa29.99■■■□□ 2.39
CDKN3-211ENST00000611205 ANKRD13CQ8N6S4 541 aa29.99■■■□□ 2.39
CDKN3-211ENST00000611205 PNMA3Q9UL41 463 aa29.99■■■□□ 2.39
CDKN3-211ENST00000611205 SPP2Q13103 211 aa29.98■■■□□ 2.39
CDKN3-211ENST00000611205 UNC93B1Q9H1C4 597 aa29.98■■■□□ 2.39
CDKN3-211ENST00000611205 SNRKQ9NRH2 765 aa29.98■■■□□ 2.39
CDKN3-211ENST00000611205 CEP290O15078 2479 aa29.98■■■□□ 2.39
CDKN3-211ENST00000611205 SIPA1L1O43166 1804 aa29.97■■■□□ 2.39
CDKN3-211ENST00000611205 ELNP15502 786 aa29.97■■■□□ 2.39
CDKN3-211ENST00000611205 FXR1P51114 621 aaKnown RBP eCLIP29.97■■■□□ 2.39
CDKN3-211ENST00000611205 OS9Q13438 667 aaPredicted RBP29.97■■■□□ 2.39
CDKN3-211ENST00000611205 TTC39AQ5SRH9 613 aa29.97■■■□□ 2.39
CDKN3-211ENST00000611205 ZKSCAN2Q63HK3 967 aa29.97■■■□□ 2.39
CDKN3-211ENST00000611205 SH3RF3Q8TEJ3 882 aaPredicted RBP29.97■■■□□ 2.39
CDKN3-211ENST00000611205 TAOK2Q9UL54 1235 aa29.97■■■□□ 2.39
CDKN3-211ENST00000611205 PROCA1Q8NCQ7 364 aaPredicted RBP29.96■■■□□ 2.39
CDKN3-211ENST00000611205 ZNF280CQ8ND82 737 aa29.96■■■□□ 2.39
CDKN3-211ENST00000611205 FOCADQ5VW36 1801 aa29.96■■■□□ 2.39
CDKN3-211ENST00000611205 CAP2P40123 477 aa29.95■■■□□ 2.39
CDKN3-211ENST00000611205 HMGCS2P54868 508 aa29.95■■■□□ 2.39
CDKN3-211ENST00000611205 NAA16Q6N069 864 aaPredicted RBP29.95■■■□□ 2.39
CDKN3-211ENST00000611205 U2AF1L4Q8WU68 220 aaKnown RBP29.95■■■□□ 2.39
CDKN3-211ENST00000611205 AATFQ9NY61 560 aaKnown RBP eCLIP29.95■■■□□ 2.39
CDKN3-211ENST00000611205 INHAP05111 366 aa29.94■■■□□ 2.38
CDKN3-211ENST00000611205 RRP1BQ14684 758 aaKnown RBP29.94■■■□□ 2.38
CDKN3-211ENST00000611205 TNNI3KQ59H18 835 aa29.94■■■□□ 2.38
CDKN3-211ENST00000611205 CCDC158Q5M9N0 1113 aa29.94■■■□□ 2.38
CDKN3-211ENST00000611205 COA7Q96BR5 231 aa29.94■■■□□ 2.38
CDKN3-211ENST00000611205 DBNDD2Q9BQY9 259 aa29.94■■■□□ 2.38
CDKN3-211ENST00000611205 FPGT-TNNI3KV9GXZ4 949 aa29.94■■■□□ 2.38
CDKN3-211ENST00000611205 USP17L5A8MUK1 530 aa29.93■■■□□ 2.38
CDKN3-211ENST00000611205 BAG3O95817 575 aa29.93■■■□□ 2.38
CDKN3-211ENST00000611205 POLA2Q14181 598 aa29.93■■■□□ 2.38
CDKN3-211ENST00000611205 FAM110CQ1W6H9 321 aa29.93■■■□□ 2.38
CDKN3-211ENST00000611205 PXYLP1Q8TE99 480 aa29.93■■■□□ 2.38
CDKN3-211ENST00000611205 HTATIP2Q9BUP3 242 aa29.93■■■□□ 2.38
CDKN3-211ENST00000611205 TBC1D2Q9BYX2 928 aa29.93■■■□□ 2.38
CDKN3-211ENST00000611205 GPR108Q9NPR9 543 aa29.93■■■□□ 2.38
CDKN3-211ENST00000611205 HERC5Q9UII4 1024 aaKnown RBP29.93■■■□□ 2.38
CDKN3-211ENST00000611205 PABPC4Q13310 644 aaKnown RBP eCLIP29.92■■■□□ 2.384e-9■■■■□ 25.4
CDKN3-211ENST00000611205 IRF5Q13568 498 aa29.92■■■□□ 2.38
CDKN3-211ENST00000611205 C1orf115Q9H7X2 142 aa29.92■■■□□ 2.38
CDKN3-211ENST00000611205 AS3MTQ9HBK9 375 aa29.92■■■□□ 2.38
CDKN3-211ENST00000611205 PI4KBQ9UBF8 816 aa29.92■■■□□ 2.38
CDKN3-211ENST00000611205 SURF6O75683 361 aaKnown RBP29.91■■■□□ 2.38
CDKN3-211ENST00000611205 FARP2O94887 1054 aaPredicted RBP29.91■■■□□ 2.38
CDKN3-211ENST00000611205 SGPL1O95470 568 aa29.91■■■□□ 2.38
CDKN3-211ENST00000611205 CHRDL2Q6WN34 429 aa29.91■■■□□ 2.38
CDKN3-211ENST00000611205 UBE2Q1Q7Z7E8 422 aa29.91■■■□□ 2.38
CDKN3-211ENST00000611205 PLCG2P16885 1265 aa29.9■■■□□ 2.38
CDKN3-211ENST00000611205 ATP8B2P98198 1209 aa29.9■■■□□ 2.38
CDKN3-211ENST00000611205 MAPKAPK5Q8IW41 473 aa29.9■■■□□ 2.38
CDKN3-211ENST00000611205 SSH3Q8TE77 659 aa29.9■■■□□ 2.38
CDKN3-211ENST00000611205 TGFBRAP1Q8WUH2 860 aa29.9■■■□□ 2.38
CDKN3-211ENST00000611205 DHX36Q9H2U1 1008 aaKnown RBP29.9■■■□□ 2.38
CDKN3-211ENST00000611205 CYP2E1P05181 493 aaPredicted RBP29.89■■■□□ 2.38
CDKN3-211ENST00000611205 GCLCP48506 637 aaPredicted RBP29.88■■■□□ 2.37
CDKN3-211ENST00000611205 ADGRA1Q86SQ6 560 aa29.88■■■□□ 2.37
CDKN3-211ENST00000611205 DEFB118Q96PH6 123 aa29.88■■■□□ 2.37
CDKN3-211ENST00000611205 TRIM34Q9BYJ4 488 aa29.88■■■□□ 2.37
CDKN3-211ENST00000611205 ASCC2Q9H1I8 757 aaPredicted RBP29.88■■■□□ 2.37
CDKN3-211ENST00000611205 MYH1P12882 1939 aa29.87■■■□□ 2.37
CDKN3-211ENST00000611205 TFRCP02786 760 aaKnown RBP29.87■■■□□ 2.37
CDKN3-211ENST00000611205 SH3D19Q5HYK7 790 aa29.87■■■□□ 2.37
CDKN3-211ENST00000611205 FTSJ3Q8IY81 847 aaKnown RBP29.87■■■□□ 2.37
CDKN3-211ENST00000611205 TRIOBPQ9H2D6 2365 aa29.87■■■□□ 2.37
CDKN3-211ENST00000611205 FLT1P17948 1338 aa29.87■■■□□ 2.37
CDKN3-211ENST00000611205 ZAP70P43403 619 aa29.86■■■□□ 2.37
CDKN3-211ENST00000611205 PPP4CP60510 307 aa29.86■■■□□ 2.37
CDKN3-211ENST00000611205 MTMR2Q13614 643 aa29.86■■■□□ 2.37
CDKN3-211ENST00000611205 CRACR2BQ8N4Y2 399 aaPredicted RBP29.86■■■□□ 2.37
CDKN3-211ENST00000611205 ITPRIPQ8IWB1 547 aa29.85■■■□□ 2.37
CDKN3-211ENST00000611205 ASNSP08243 561 aa29.84■■■□□ 2.37
CDKN3-211ENST00000611205 WDR18Q9BV38 432 aa29.84■■■□□ 2.37
CDKN3-211ENST00000611205 DNAJC18Q9H819 358 aa29.84■■■□□ 2.37
CDKN3-211ENST00000611205 PIH1D3Q9NQM4 214 aaKnown RBP29.84■■■□□ 2.37
CDKN3-211ENST00000611205 TMOD4Q9NZQ9 345 aa29.84■■■□□ 2.37
CDKN3-211ENST00000611205 PALD1Q9ULE6 856 aa29.84■■■□□ 2.37
CDKN3-211ENST00000611205 NR2E3Q9Y5X4 410 aa29.84■■■□□ 2.37
CDKN3-211ENST00000611205 PLXNB2O15031 1838 aa29.83■■■□□ 2.37
CDKN3-211ENST00000611205 GDF11O95390 407 aa29.83■■■□□ 2.37
CDKN3-211ENST00000611205 IRX3P78415 501 aaPredicted RBP29.83■■■□□ 2.37
CDKN3-211ENST00000611205 FOXP4Q8IVH2 680 aaPredicted RBP29.83■■■□□ 2.37
CDKN3-211ENST00000611205 ZNF512BQ96KM6 892 aaPredicted RBP29.83■■■□□ 2.37
CDKN3-211ENST00000611205 CCDC8Q9H0W5 538 aaPredicted RBP29.83■■■□□ 2.37
CDKN3-211ENST00000611205 PAK6Q9NQU5 681 aaPredicted RBP29.83■■■□□ 2.37
CDKN3-211ENST00000611205 TLR7Q9NYK1 1049 aaKnown RBP29.83■■■□□ 2.37
CDKN3-211ENST00000611205 RBM27Q9P2N5 1060 aaKnown RBP29.83■■■□□ 2.37
CDKN3-211ENST00000611205 SAP30BPQ9UHR5 308 aaKnown RBP29.83■■■□□ 2.37
CDKN3-211ENST00000611205 DBNLQ9UJU6 430 aaKnown RBP29.83■■■□□ 2.37
CDKN3-211ENST00000611205 BACE1P56817 501 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms