RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 SLU7O95391 586 aaKnown RBP18.42■□□□□ 0.54
RTN1-209ENST00000611068 DNAJC21Q5F1R6 531 aaKnown RBP18.42■□□□□ 0.54
RTN1-209ENST00000611068 ZNF384Q8TF68 577 aa18.42■□□□□ 0.54
RTN1-209ENST00000611068 NBPF3Q9H094 633 aa18.42■□□□□ 0.54
RTN1-209ENST00000611068 EPB41L4AQ9HCS5 686 aaPredicted RBP18.42■□□□□ 0.54
RTN1-209ENST00000611068 RIMBP2O15034 1052 aa18.41■□□□□ 0.54
RTN1-209ENST00000611068 DHX32Q7L7V1 743 aaKnown RBP18.41■□□□□ 0.54
RTN1-209ENST00000611068 TBC1D10CQ8IV04 446 aa18.41■□□□□ 0.54
RTN1-209ENST00000611068 RBM17Q96I25 401 aaKnown RBP18.41■□□□□ 0.54
RTN1-209ENST00000611068 NCOA5Q9HCD5 579 aaKnown RBP18.41■□□□□ 0.54
RTN1-209ENST00000611068 CCDC144BQ3MJ40 725 aa18.41■□□□□ 0.54
RTN1-209ENST00000611068 CCDC144CPQ8IYA2 1237 aa18.41■□□□□ 0.54
RTN1-209ENST00000611068 TMEM87AQ8NBN3 555 aa18.41■□□□□ 0.54
RTN1-209ENST00000611068 DDX11Q96FC9 970 aa18.41■□□□□ 0.54
RTN1-209ENST00000611068 INTS4Q96HW7 963 aaKnown RBP18.41■□□□□ 0.54
RTN1-209ENST00000611068 C6orf229H3BNL8 230 aa18.4■□□□□ 0.54
RTN1-209ENST00000611068 GRIK5Q16478 980 aa18.4■□□□□ 0.54
RTN1-209ENST00000611068 NLGN1Q8N2Q7 840 aa18.4■□□□□ 0.54
RTN1-209ENST00000611068 JAK2O60674 1132 aa18.4■□□□□ 0.54
RTN1-209ENST00000611068 ATP2B1P20020 1258 aa18.4■□□□□ 0.54
RTN1-209ENST00000611068 ARID5BQ14865 1188 aa18.4■□□□□ 0.54
RTN1-209ENST00000611068 CRY2Q49AN0 593 aa18.4■□□□□ 0.54
RTN1-209ENST00000611068 RRP12Q5JTH9 1297 aaKnown RBP18.4■□□□□ 0.54
RTN1-209ENST00000611068 TCHHQ07283 1943 aa18.4■□□□□ 0.54
RTN1-209ENST00000611068 UBE2HP62256 183 aa18.39■□□□□ 0.54
RTN1-209ENST00000611068 PTPN14Q15678 1187 aa18.39■□□□□ 0.54
RTN1-209ENST00000611068 TMED8Q6PL24 325 aaPredicted RBP18.39■□□□□ 0.54
RTN1-209ENST00000611068 NYAP1Q6ZVC0 841 aa18.39■□□□□ 0.54
RTN1-209ENST00000611068 IFNL3Q8IZI9 196 aa18.39■□□□□ 0.54
RTN1-209ENST00000611068 NAPBQ9H115 298 aa18.39■□□□□ 0.54
RTN1-209ENST00000611068 CYP2D7A0A087X1C5 515 aa18.39■□□□□ 0.53
RTN1-209ENST00000611068 FIBPO43427 364 aa18.39■□□□□ 0.53
RTN1-209ENST00000611068 SYT1P21579 422 aa18.39■□□□□ 0.53
RTN1-209ENST00000611068 TDO2P48775 406 aa18.39■□□□□ 0.53
RTN1-209ENST00000611068 EVX2Q03828 476 aa18.39■□□□□ 0.53
RTN1-209ENST00000611068 TTC31Q49AM3 519 aaPredicted RBP18.39■□□□□ 0.53
RTN1-209ENST00000611068 TRMT1Q9NXH9 659 aaKnown RBP18.39■□□□□ 0.53
RTN1-209ENST00000611068 POLLQ9UGP5 575 aa18.39■□□□□ 0.53
RTN1-209ENST00000611068 PARP3Q9Y6F1 533 aa18.39■□□□□ 0.53
RTN1-209ENST00000611068 MYH7P12883 1935 aa18.39■□□□□ 0.53
RTN1-209ENST00000611068 GSG1L2A8MUP6 293 aa18.38■□□□□ 0.53
RTN1-209ENST00000611068 MINDY4BA8MYZ0 360 aa18.38■□□□□ 0.53
RTN1-209ENST00000611068 B4E1Z4 1266 aa18.38■□□□□ 0.53
RTN1-209ENST00000611068 MECOMQ03112 1051 aa18.38■□□□□ 0.53
RTN1-209ENST00000611068 NAA16Q6N069 864 aaPredicted RBP18.38■□□□□ 0.53
RTN1-209ENST00000611068 AATFQ9NY61 560 aaKnown RBP eCLIP18.38■□□□□ 0.53
RTN1-209ENST00000611068 VPS37CA5D8V6 355 aaPredicted RBP18.38■□□□□ 0.53
RTN1-209ENST00000611068 TPM4P67936 248 aa18.38■□□□□ 0.53
RTN1-209ENST00000611068 ZSCAN31Q96LW9 406 aaPredicted RBP18.38■□□□□ 0.53
RTN1-209ENST00000611068 TACC3Q9Y6A5 838 aa18.38■□□□□ 0.53
RTN1-209ENST00000611068 XDHP47989 1333 aa18.38■□□□□ 0.53
RTN1-209ENST00000611068 MAGEB6P1A0A0J9YX57 407 aa18.37■□□□□ 0.53
RTN1-209ENST00000611068 ZRANB2O95218 330 aaKnown RBP eCLIP18.37■□□□□ 0.53
RTN1-209ENST00000611068 EXOSC10Q01780 885 aaKnown RBP18.37■□□□□ 0.53
RTN1-209ENST00000611068 GOLGA6L1Q8N7Z2 621 aa18.37■□□□□ 0.53
RTN1-209ENST00000611068 FBXO18Q8NFZ0 1043 aa18.37■□□□□ 0.53
RTN1-209ENST00000611068 CXorf56Q9H5V9 222 aa18.37■□□□□ 0.53
RTN1-209ENST00000611068 ARAP2Q8WZ64 1704 aa18.37■□□□□ 0.53
RTN1-209ENST00000611068 PRC1O43663 620 aa18.37■□□□□ 0.53
RTN1-209ENST00000611068 ANKRD1Q15327 319 aa18.37■□□□□ 0.53
RTN1-209ENST00000611068 RALYLQ86SE5 291 aaKnown RBP18.37■□□□□ 0.53
RTN1-209ENST00000611068 FERMT3Q86UX7 667 aa18.37■□□□□ 0.53
RTN1-209ENST00000611068 FAM200AQ8TCP9 573 aa18.37■□□□□ 0.53
RTN1-209ENST00000611068 FBXW7Q969H0 707 aa18.37■□□□□ 0.53
RTN1-209ENST00000611068 TRIM5Q9C035 493 aa18.37■□□□□ 0.53
RTN1-209ENST00000611068 SH2B1Q9NRF2 756 aaPredicted RBP18.37■□□□□ 0.53
RTN1-209ENST00000611068 WDR33Q9C0J8 1336 aaKnown RBP18.37■□□□□ 0.53
RTN1-209ENST00000611068 RXRAP19793 462 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 ZNF75DP51815 510 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 EGFL6Q8IUX8 553 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 REXO1L1PQ8IX06 675 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 ZKSCAN3Q9BRR0 538 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 SENP2Q9HC62 589 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 CWC15Q9P013 229 aaKnown RBP18.36■□□□□ 0.53
RTN1-209ENST00000611068 SEC31AO94979 1220 aaKnown RBP18.36■□□□□ 0.53
RTN1-209ENST00000611068 SCRN1Q12765 414 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 DIXDC1Q155Q3 683 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 CYB5R4Q7L1T6 521 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 CAMKK2Q96RR4 588 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 GGA1Q9UJY5 639 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 NEDD4P46934 1319 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 CCDC192P0DO97 292 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 OAS2P29728 719 aaKnown RBP18.36■□□□□ 0.53
RTN1-209ENST00000611068 CHRNA5P30532 468 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 ANTXR2P58335 489 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 ARHGAP29Q52LW3 1261 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 DONSONQ9NYP3 566 aa18.36■□□□□ 0.53
RTN1-209ENST00000611068 PPEF1O14829 653 aaPredicted RBP18.35■□□□□ 0.53
RTN1-209ENST00000611068 STX6O43752 255 aa18.35■□□□□ 0.53
RTN1-209ENST00000611068 SLC15A2Q16348 729 aa18.35■□□□□ 0.53
RTN1-209ENST00000611068 PLA2G4DQ86XP0 818 aa18.35■□□□□ 0.53
RTN1-209ENST00000611068 FBXO41Q8TF61 875 aa18.35■□□□□ 0.53
RTN1-209ENST00000611068 NSUN4Q96CB9 384 aaKnown RBP18.35■□□□□ 0.53
RTN1-209ENST00000611068 FAM212AQ96EL1 285 aa18.35■□□□□ 0.53
RTN1-209ENST00000611068 NCOA7Q8NI08 942 aa18.35■□□□□ 0.53
RTN1-209ENST00000611068 GOLGA5Q8TBA6 731 aa18.35■□□□□ 0.53
RTN1-209ENST00000611068 MRVI1Q9Y6F6 885 aa18.35■□□□□ 0.53
RTN1-209ENST00000611068 A0A1B0GUL6 1792 aa18.34■□□□□ 0.53
RTN1-209ENST00000611068 HMGB1P09429 215 aaKnown RBP18.34■□□□□ 0.53
RTN1-209ENST00000611068 SRGNP10124 158 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms