RNA–Protein interactions for RNA: ENST00000610974.1

RN7SL539P-201, Transcript of RNA, 7SL, cytoplasmic 539, pseudogene, humanhuman

BASIC

Gene RN7SL539P, Length 291 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL539P-201ENST00000610974 TAOK2Q9UL54 1235 aa12.55□□□□□ -0.4
RN7SL539P-201ENST00000610974 LOC285556D6RIA3 1793 aa12.55□□□□□ -0.4
RN7SL539P-201ENST00000610974 COL2A1P02458 1487 aaPredicted RBP12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 ATAD5Q96QE3 1844 aa12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 FAM196BA6NMK8 535 aa12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 LDHCP07864 332 aa12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 GCLCP48506 637 aaPredicted RBP12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 TFCP2Q12800 502 aa12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 SPP2Q13103 211 aa12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 TRMT2AQ8IZ69 625 aaKnown RBP12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 ZNF280CQ8ND82 737 aa12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 PAWRQ96IZ0 340 aaKnown RBP12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 TBC1D2Q9BYX2 928 aa12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 ALPK3Q96L96 1907 aa12.54□□□□□ -0.4
RN7SL539P-201ENST00000610974 HMGCRP04035 888 aa12.53□□□□□ -0.4
RN7SL539P-201ENST00000610974 GSTO1P78417 241 aa12.53□□□□□ -0.4
RN7SL539P-201ENST00000610974 PABPC4Q13310 644 aaKnown RBP eCLIP12.53□□□□□ -0.4
RN7SL539P-201ENST00000610974 NECAB2Q7Z6G3 386 aa12.53□□□□□ -0.4
RN7SL539P-201ENST00000610974 ANKLE1Q8NAG6 615 aa12.53□□□□□ -0.4
RN7SL539P-201ENST00000610974 NSUN4Q96CB9 384 aaKnown RBP12.53□□□□□ -0.4
RN7SL539P-201ENST00000610974 HMG20BQ9P0W2 317 aa12.53□□□□□ -0.4
RN7SL539P-201ENST00000610974 STAP2Q9UGK3 403 aa12.53□□□□□ -0.4
RN7SL539P-201ENST00000610974 SOX1O00570 391 aaPredicted RBP12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 SRGAP3O43295 1099 aa12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 CAP2P40123 477 aa12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 HMGCS2P54868 508 aa12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 MTX1Q13505 466 aa12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 SH3D19Q5HYK7 790 aa12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 SPATA5Q8NB90 893 aa12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 DIS3LQ8TF46 1054 aaKnown RBP12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 NEUROD6Q96NK8 337 aa12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 ASCC2Q9H1I8 757 aaPredicted RBP12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 HERC5Q9UII4 1024 aaKnown RBP12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 GJD2Q9UKL4 321 aa12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 A0A0C4DFX4 3053 aa12.52□□□□□ -0.41
RN7SL539P-201ENST00000610974 USP17L5A8MUK1 530 aa12.51□□□□□ -0.41
RN7SL539P-201ENST00000610974 GNAI3P08754 354 aa12.51□□□□□ -0.41
RN7SL539P-201ENST00000610974 RRP1BQ14684 758 aaKnown RBP12.51□□□□□ -0.41
RN7SL539P-201ENST00000610974 GORABQ5T7V8 394 aa12.51□□□□□ -0.41
RN7SL539P-201ENST00000610974 PI16Q6UXB8 463 aa12.51□□□□□ -0.41
RN7SL539P-201ENST00000610974 TBC1D9Q6ZT07 1266 aa12.51□□□□□ -0.41
RN7SL539P-201ENST00000610974 LRCH3Q96II8 777 aa12.51□□□□□ -0.41
RN7SL539P-201ENST00000610974 HMX1Q9NP08 348 aaPredicted RBP12.51□□□□□ -0.41
RN7SL539P-201ENST00000610974 RPTORQ8N122 1335 aa12.51□□□□□ -0.41
RN7SL539P-201ENST00000610974 PLXNB2O15031 1838 aa12.51□□□□□ -0.41
RN7SL539P-201ENST00000610974 ARID4AP29374 1257 aaPredicted RBP12.5□□□□□ -0.41
RN7SL539P-201ENST00000610974 BMP8BP34820 402 aa12.5□□□□□ -0.41
RN7SL539P-201ENST00000610974 TEX11Q8IYF3 940 aa12.5□□□□□ -0.41
RN7SL539P-201ENST00000610974 SLC17A8Q8NDX2 589 aa12.5□□□□□ -0.41
RN7SL539P-201ENST00000610974 GDF15Q99988 308 aa12.5□□□□□ -0.41
RN7SL539P-201ENST00000610974 NBPF3Q9H094 633 aa12.5□□□□□ -0.41
RN7SL539P-201ENST00000610974 AS3MTQ9HBK9 375 aa12.5□□□□□ -0.41
RN7SL539P-201ENST00000610974 RAI14Q9P0K7 980 aa12.5□□□□□ -0.41
RN7SL539P-201ENST00000610974 PI4KBQ9UBF8 816 aa12.5□□□□□ -0.41
RN7SL539P-201ENST00000610974 MORF4L1Q9UBU8 362 aa12.5□□□□□ -0.41
RN7SL539P-201ENST00000610974 DDX60LQ5H9U9 1706 aaKnown RBP12.49□□□□□ -0.41
RN7SL539P-201ENST00000610974 RARSP54136 660 aaKnown RBP12.49□□□□□ -0.41
RN7SL539P-201ENST00000610974 TRIM32Q13049 653 aa12.49□□□□□ -0.41
RN7SL539P-201ENST00000610974 C7orf61Q8IZ16 206 aa12.49□□□□□ -0.41
RN7SL539P-201ENST00000610974 SH3RF3Q8TEJ3 882 aaPredicted RBP12.49□□□□□ -0.41
RN7SL539P-201ENST00000610974 ARHGAP45Q92619 1136 aa12.49□□□□□ -0.41
RN7SL539P-201ENST00000610974 WDR18Q9BV38 432 aa12.49□□□□□ -0.41
RN7SL539P-201ENST00000610974 DHX36Q9H2U1 1008 aaKnown RBP12.49□□□□□ -0.41
RN7SL539P-201ENST00000610974 LRP2BPQ9P2M1 347 aa12.49□□□□□ -0.41
RN7SL539P-201ENST00000610974 SIPA1L1O43166 1804 aa12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 DLL1O00548 723 aa12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 ASNSP08243 561 aa12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 UQCRFS1P1P0C7P4 283 aa12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 HOXA7P31268 230 aaPredicted RBP12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 MCAMP43121 646 aa12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 MNX1P50219 401 aaPredicted RBP12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 BACE1P56817 501 aa12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 IRX3P78415 501 aaPredicted RBP12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 MTMR2Q13614 643 aa12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 MAP3K21Q5TCX8 1036 aa12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 GPR153Q6NV75 609 aa12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 TRIB2Q92519 343 aa12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 NOL10Q9BSC4 688 aaKnown RBP12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 TMOD4Q9NZQ9 345 aa12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 OGDHLQ9ULD0 1010 aa12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 ZMYND8Q9ULU4 1186 aaPredicted RBP12.48□□□□□ -0.41
RN7SL539P-201ENST00000610974 C19orf81C9J6K1 198 aa12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 BAG3O95817 575 aa12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 XRCC5P13010 732 aaKnown RBP12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 PLCG2P16885 1265 aa12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 CYP2B6P20813 491 aa12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 G3BP1Q13283 466 aaKnown RBP eCLIP12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 DIEXFQ68CQ4 756 aaKnown RBP12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 METTL16Q86W50 562 aaKnown RBP12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 GPRC5AQ8NFJ5 357 aa12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 P2RX7Q99572 595 aaKnown RBP12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 NUDT12Q9BQG2 462 aa12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 C11orf49Q9H6J7 331 aa12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 AATFQ9NY61 560 aaKnown RBP eCLIP12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 MAST2Q6P0Q8 1798 aa12.47□□□□□ -0.41
RN7SL539P-201ENST00000610974 CDK5RAP2Q96SN8 1893 aa12.46□□□□□ -0.41
RN7SL539P-201ENST00000610974 FOCADQ5VW36 1801 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms