RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, human

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTCFL-222	ENST00000609232	KIAA0825	Q8IV33	1275 aa		11.38	□□□□□ -0.59
CTCFL-222	ENST00000609232	FSIP1	Q8NA03	581 aa		11.38	□□□□□ -0.59
CTCFL-222	ENST00000609232	TGFBRAP1	Q8WUH2	860 aa		11.38	□□□□□ -0.59
CTCFL-222	ENST00000609232	NHS	Q6T4R5	1651 aa		11.38	□□□□□ -0.59
CTCFL-222	ENST00000609232	BRCA2	P51587	3418 aa		11.38	□□□□□ -0.59
CTCFL-222	ENST00000609232	RBAK-RBAKDN	I3L0D1	243 aa		11.38	□□□□□ -0.59
CTCFL-222	ENST00000609232	ZNF500	O60304	480 aa	Predicted RBP	11.38	□□□□□ -0.59
CTCFL-222	ENST00000609232	GTF2I	P78347	998 aa		11.38	□□□□□ -0.59
CTCFL-222	ENST00000609232	POTEA	Q6S8J7	498 aa		11.38	□□□□□ -0.59
CTCFL-222	ENST00000609232	IFNL3	Q8IZI9	196 aa		11.38	□□□□□ -0.59
CTCFL-222	ENST00000609232	SYAP1	Q96A49	352 aa	Predicted RBP	11.38	□□□□□ -0.59
CTCFL-222	ENST00000609232	POLD4	Q9HCU8	107 aa		11.38	□□□□□ -0.59
CTCFL-222	ENST00000609232	LAMA2	P24043	3122 aa	Known RBP	11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	GOLGA6L19	H0YKK7	550 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	NR1I2	O75469	434 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	TM4SF1	P30408	202 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	PPP4R3B	Q5MIZ7	849 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	RASGRP4	Q8TDF6	673 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	IL17RA	Q96F46	866 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	ATP6V1D	Q9Y5K8	247 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	PATL2	C9JE40	543 aa	Known RBP	11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	SMC2	O95347	1197 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	CASP1	P29466	404 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	ALG1	Q9BT22	464 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	GGA1	Q9UJY5	639 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	XDH	P47989	1333 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	BRD1	O95696	1058 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	CPLX2	Q6PUV4	134 aa	Known RBP	11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	ZNF804A	Q7Z570	1209 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	CPLX3	Q8WVH0	158 aa		11.37	□□□□□ -0.59
CTCFL-222	ENST00000609232	PLSCR1	O15162	318 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	KIN	O60870	393 aa	Known RBP	11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	USP17L8	P0C7I0	530 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	PDC	P20941	246 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	NOL10	Q9BSC4	688 aa	Known RBP	11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	CCDC94	Q9BW85	323 aa	Predicted RBP	11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	NUP62CL	Q9H1M0	184 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	VPS54	Q9P1Q0	977 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	MTMR6	Q9Y217	621 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	TAF1	P21675	1872 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	SSB	P05455	408 aa	Known RBP eCLIP	11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	GPSM2	P81274	684 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	DEFB132	Q7Z7B7	95 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	CCAR1	Q8IX12	1150 aa	Known RBP	11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	ZNF526	Q8TF50	670 aa	Predicted RBP	11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	USP28	Q96RU2	1077 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	ZHX3	Q9H4I2	956 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232		V9GY48	417 aa	Predicted RBP	11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	C4B	P0C0L5	1744 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	COL5A3	P25940	1745 aa	Predicted RBP	11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	POLRMT	O00411	1230 aa	Known RBP	11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	STX17	P56962	302 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	ZNF445	P59923	1031 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	SNAP25	P60880	206 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	EZH2	Q15910	746 aa	Known RBP	11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	FBXO33	Q7Z6M2	555 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	CCAR2	Q8N163	923 aa	Known RBP	11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	LEMD3	Q9Y2U8	911 aa		11.36	□□□□□ -0.59
CTCFL-222	ENST00000609232	TCRBV5S4A2T	A0A5A2	114 aa		11.35	□□□□□ -0.59
CTCFL-222	ENST00000609232	IARS	P41252	1262 aa	Known RBP	11.35	□□□□□ -0.59
CTCFL-222	ENST00000609232	NR5A1	Q13285	461 aa		11.35	□□□□□ -0.59
CTCFL-222	ENST00000609232	TBC1D10C	Q8IV04	446 aa		11.35	□□□□□ -0.59
CTCFL-222	ENST00000609232	FLAD1	Q8NFF5	587 aa		11.35	□□□□□ -0.59
CTCFL-222	ENST00000609232	STK32B	Q9NY57	414 aa		11.35	□□□□□ -0.59
CTCFL-222	ENST00000609232	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.35	□□□□□ -0.59
CTCFL-222	ENST00000609232	BBOX1	O75936	387 aa		11.35	□□□□□ -0.59
CTCFL-222	ENST00000609232	LDHB	P07195	334 aa	Known RBP	11.35	□□□□□ -0.59
CTCFL-222	ENST00000609232	GNAT2	P19087	354 aa		11.35	□□□□□ -0.59
CTCFL-222	ENST00000609232	ANO6	Q4KMQ2	910 aa		11.35	□□□□□ -0.59
CTCFL-222	ENST00000609232	GRAMD1C	Q8IYS0	662 aa		11.35	□□□□□ -0.59
CTCFL-222	ENST00000609232	ZBTB43	O43298	467 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	ADCY5	O95622	1261 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	GOLGA8F	Q08AF8	430 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	GOLGA8DP	Q0D2H9	430 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	GTF3C6	Q969F1	213 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	PGBD1	Q96JS3	809 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	ZSWIM5	Q9P217	1185 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	KIF3A	Q9Y496	699 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	FOXP2	O15409	715 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	MECOM	Q03112	1051 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	CYB5R4	Q7L1T6	521 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	ADGRA1	Q86SQ6	560 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	UBA5	Q9GZZ9	404 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	GSG1L2	A8MUP6	293 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	CHRNA5	P30532	468 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	CABP5	Q9NP86	173 aa		11.34	□□□□□ -0.59
CTCFL-222	ENST00000609232	BTBD18	B2RXH4	712 aa		11.33	□□□□□ -0.59
CTCFL-222	ENST00000609232	PPEF1	O14829	653 aa	Predicted RBP	11.33	□□□□□ -0.59
CTCFL-222	ENST00000609232	GUCY1A2	P33402	732 aa		11.33	□□□□□ -0.59
CTCFL-222	ENST00000609232	RAD51AP2	Q09MP3	1159 aa		11.33	□□□□□ -0.59
CTCFL-222	ENST00000609232	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.33	□□□□□ -0.59
CTCFL-222	ENST00000609232	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.33	□□□□□ -0.59
CTCFL-222	ENST00000609232	KCNG1	Q9UIX4	513 aa		11.33	□□□□□ -0.59
CTCFL-222	ENST00000609232	USP17L3	A6NCW0	530 aa		11.33	□□□□□ -0.6
CTCFL-222	ENST00000609232	USP17L4	A6NCW7	530 aa		11.33	□□□□□ -0.6
CTCFL-222	ENST00000609232	SEMA3E	O15041	775 aa		11.33	□□□□□ -0.6
CTCFL-222	ENST00000609232	LMOD1	P29536	600 aa	Predicted RBP	11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms