RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 PDS5AQ29RF7 1337 aaKnown RBP21.47■■□□□ 1.03
CHMP4A-211ENST00000609024 SLURP2P0DP57 97 aa21.46■■□□□ 1.03
CHMP4A-211ENST00000609024 HMGCS2P54868 508 aa21.46■■□□□ 1.03
CHMP4A-211ENST00000609024 MECOMQ03112 1051 aa21.46■■□□□ 1.03
CHMP4A-211ENST00000609024 MVPQ14764 893 aaKnown RBP21.46■■□□□ 1.03
CHMP4A-211ENST00000609024 ALDH1L2Q3SY69 923 aa21.46■■□□□ 1.03
CHMP4A-211ENST00000609024 GORABQ5T7V8 394 aa21.46■■□□□ 1.03
CHMP4A-211ENST00000609024 GPR153Q6NV75 609 aa21.46■■□□□ 1.03
CHMP4A-211ENST00000609024 CCAR1Q8IX12 1150 aaKnown RBP21.46■■□□□ 1.03
CHMP4A-211ENST00000609024 GDF15Q99988 308 aa21.46■■□□□ 1.03
CHMP4A-211ENST00000609024 NOL10Q9BSC4 688 aaKnown RBP21.46■■□□□ 1.03
CHMP4A-211ENST00000609024 PA2G4Q9UQ80 394 aaKnown RBP21.46■■□□□ 1.03
CHMP4A-211ENST00000609024 RFX7Q2KHR2 1363 aa21.46■■□□□ 1.03
CHMP4A-211ENST00000609024 GPR75-ASB3A0A0A6YYF3 556 aa21.45■■□□□ 1.02
CHMP4A-211ENST00000609024 FAM196BA6NMK8 535 aa21.45■■□□□ 1.02
CHMP4A-211ENST00000609024 USP17L5A8MUK1 530 aa21.45■■□□□ 1.02
CHMP4A-211ENST00000609024 MAP4K4O95819 1239 aaPredicted RBP21.45■■□□□ 1.02
CHMP4A-211ENST00000609024 TIMM10P62072 90 aa21.45■■□□□ 1.02
CHMP4A-211ENST00000609024 IRX3P78415 501 aaPredicted RBP21.45■■□□□ 1.02
CHMP4A-211ENST00000609024 TMOD4Q9NZQ9 345 aa21.45■■□□□ 1.02
CHMP4A-211ENST00000609024 PHIPQ8WWQ0 1821 aa21.44■■□□□ 1.02
CHMP4A-211ENST00000609024 ZBTB22O15209 634 aa21.44■■□□□ 1.02
CHMP4A-211ENST00000609024 SYN1P17600 705 aa21.44■■□□□ 1.02
CHMP4A-211ENST00000609024 MNX1P50219 401 aaPredicted RBP21.44■■□□□ 1.02
CHMP4A-211ENST00000609024 NEUROD6Q96NK8 337 aa21.44■■□□□ 1.02
CHMP4A-211ENST00000609024 ASCC2Q9H1I8 757 aaPredicted RBP21.44■■□□□ 1.02
CHMP4A-211ENST00000609024 COPRSQ9NQ92 184 aa21.44■■□□□ 1.02
CHMP4A-211ENST00000609024 A0A1B0GUL7 405 aa21.43■■□□□ 1.02
CHMP4A-211ENST00000609024 NPM3O75607 178 aaKnown RBP21.43■■□□□ 1.02
CHMP4A-211ENST00000609024 PDE3AQ14432 1141 aa21.43■■□□□ 1.02
CHMP4A-211ENST00000609024 XAGE2Q96GT9 111 aa21.43■■□□□ 1.02
CHMP4A-211ENST00000609024 TRIM34Q9BYJ4 488 aa21.43■■□□□ 1.02
CHMP4A-211ENST00000609024 UBE2OQ9C0C9 1292 aaKnown RBP21.43■■□□□ 1.02
CHMP4A-211ENST00000609024 RAI14Q9P0K7 980 aa21.43■■□□□ 1.02
CHMP4A-211ENST00000609024 CYP2B6P20813 491 aa21.42■■□□□ 1.02
CHMP4A-211ENST00000609024 CAP2P40123 477 aa21.42■■□□□ 1.02
CHMP4A-211ENST00000609024 DOCK3Q8IZD9 2030 aa21.42■■□□□ 1.02
CHMP4A-211ENST00000609024 TDHQ8IZJ6 230 aa21.42■■□□□ 1.02
CHMP4A-211ENST00000609024 ZNF521Q96K83 1311 aa21.42■■□□□ 1.02
CHMP4A-211ENST00000609024 NUDT12Q9BQG2 462 aa21.42■■□□□ 1.02
CHMP4A-211ENST00000609024 CWC22Q9HCG8 908 aaKnown RBP21.42■■□□□ 1.02
CHMP4A-211ENST00000609024 RHBDL3P58872 404 aa21.41■■□□□ 1.02
CHMP4A-211ENST00000609024 TRIM32Q13049 653 aa21.41■■□□□ 1.02
CHMP4A-211ENST00000609024 TRMT44Q8IYL2 757 aaKnown RBP21.41■■□□□ 1.02
CHMP4A-211ENST00000609024 SOCS4Q8WXH5 440 aa21.41■■□□□ 1.02
CHMP4A-211ENST00000609024 API5Q9BZZ5 524 aaKnown RBP21.41■■□□□ 1.02
CHMP4A-211ENST00000609024 HERC5Q9UII4 1024 aaKnown RBP21.41■■□□□ 1.02
CHMP4A-211ENST00000609024 GJD2Q9UKL4 321 aa21.41■■□□□ 1.02
CHMP4A-211ENST00000609024 ALPK3Q96L96 1907 aa21.4■■□□□ 1.02
CHMP4A-211ENST00000609024 MAGEA10P43363 369 aaPredicted RBP21.4■■□□□ 1.02
CHMP4A-211ENST00000609024 LRIT3Q3SXY7 679 aa21.4■■□□□ 1.02
CHMP4A-211ENST00000609024 TEX11Q8IYF3 940 aa21.4■■□□□ 1.02
CHMP4A-211ENST00000609024 GPRC5AQ8NFJ5 357 aa21.4■■□□□ 1.02
CHMP4A-211ENST00000609024 PRKAR2AP13861 404 aaKnown RBP21.39■■□□□ 1.01
CHMP4A-211ENST00000609024 ZKSCAN1P17029 563 aaPredicted RBP21.39■■□□□ 1.01
CHMP4A-211ENST00000609024 TFCP2Q12800 502 aa21.39■■□□□ 1.01
CHMP4A-211ENST00000609024 SH3D19Q5HYK7 790 aa21.39■■□□□ 1.01
CHMP4A-211ENST00000609024 Q7L0L9 218 aa21.39■■□□□ 1.01
CHMP4A-211ENST00000609024 SPATA5Q8NB90 893 aa21.39■■□□□ 1.01
CHMP4A-211ENST00000609024 TRIB2Q92519 343 aa21.39■■□□□ 1.01
CHMP4A-211ENST00000609024 LRP2BPQ9P2M1 347 aa21.39■■□□□ 1.01
CHMP4A-211ENST00000609024 PI4KBQ9UBF8 816 aa21.39■■□□□ 1.01
CHMP4A-211ENST00000609024 MORF4L1Q9UBU8 362 aa21.39■■□□□ 1.01
CHMP4A-211ENST00000609024 OGDHLQ9ULD0 1010 aa21.39■■□□□ 1.01
CHMP4A-211ENST00000609024 STXBP5LQ9Y2K9 1186 aa21.39■■□□□ 1.01
CHMP4A-211ENST00000609024 LOC285556D6RIA3 1793 aa21.38■■□□□ 1.01
CHMP4A-211ENST00000609024 DDX60LQ5H9U9 1706 aaKnown RBP21.38■■□□□ 1.01
CHMP4A-211ENST00000609024 SRGAP3O43295 1099 aa21.38■■□□□ 1.01
CHMP4A-211ENST00000609024 BAG3O95817 575 aa21.38■■□□□ 1.01
CHMP4A-211ENST00000609024 ASNSP08243 561 aa21.38■■□□□ 1.01
CHMP4A-211ENST00000609024 MTMR2Q13614 643 aa21.38■■□□□ 1.01
CHMP4A-211ENST00000609024 CRACR2BQ8N4Y2 399 aaPredicted RBP21.38■■□□□ 1.01
CHMP4A-211ENST00000609024 DHX36Q9H2U1 1008 aaKnown RBP21.38■■□□□ 1.01
CHMP4A-211ENST00000609024 NOB1Q9ULX3 412 aaKnown RBP21.38■■□□□ 1.01
CHMP4A-211ENST00000609024 COL2A1P02458 1487 aaPredicted RBP21.38■■□□□ 1.01
CHMP4A-211ENST00000609024 ATAD5Q96QE3 1844 aa21.37■■□□□ 1.01
CHMP4A-211ENST00000609024 MAPK4P31152 587 aa21.37■■□□□ 1.01
CHMP4A-211ENST00000609024 NSUN4Q96CB9 384 aaKnown RBP21.37■■□□□ 1.01
CHMP4A-211ENST00000609024 HMG20BQ9P0W2 317 aa21.37■■□□□ 1.01
CHMP4A-211ENST00000609024 C19orf81C9J6K1 198 aa21.36■■□□□ 1.01
CHMP4A-211ENST00000609024 XRCC5P13010 732 aaKnown RBP21.36■■□□□ 1.01
CHMP4A-211ENST00000609024 BACE1P56817 501 aa21.36■■□□□ 1.01
CHMP4A-211ENST00000609024 SLFN5Q08AF3 891 aa21.36■■□□□ 1.01
CHMP4A-211ENST00000609024 TBC1D9Q6ZT07 1266 aa21.36■■□□□ 1.01
CHMP4A-211ENST00000609024 P2RX7Q99572 595 aaKnown RBP21.36■■□□□ 1.01
CHMP4A-211ENST00000609024 WDR18Q9BV38 432 aa21.36■■□□□ 1.01
CHMP4A-211ENST00000609024 GNAI3P08754 354 aa21.35■■□□□ 1.01
CHMP4A-211ENST00000609024 PLCG2P16885 1265 aa21.35■■□□□ 1.01
CHMP4A-211ENST00000609024 RGS2P41220 211 aa21.35■■□□□ 1.01
CHMP4A-211ENST00000609024 HERVK_113P62684 666 aa21.35■■□□□ 1.01
CHMP4A-211ENST00000609024 GTF3C2Q8WUA4 911 aaPredicted RBP21.35■■□□□ 1.01
CHMP4A-211ENST00000609024 USP17L10C9JJH3 530 aa21.34■■□□□ 1.01
CHMP4A-211ENST00000609024 HOXA7P31268 230 aaPredicted RBP21.34■■□□□ 1.01
CHMP4A-211ENST00000609024 MAP3K21Q5TCX8 1036 aa21.34■■□□□ 1.01
CHMP4A-211ENST00000609024 MEIS3Q99687 375 aa21.34■■□□□ 1.01
CHMP4A-211ENST00000609024 LBHD1Q9BQE6 289 aaPredicted RBP21.34■■□□□ 1.01
CHMP4A-211ENST00000609024 PAGR1Q9BTK6 254 aa21.34■■□□□ 1.01
CHMP4A-211ENST00000609024 COL6A3P12111 3177 aa21.33■■□□□ 1.01
CHMP4A-211ENST00000609024 GLRX3O76003 335 aaKnown RBP21.33■■□□□ 1.01
CHMP4A-211ENST00000609024 UQCRFS1P1P0C7P4 283 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms