RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 NDUFB9Q9Y6M9 179 aa11.74□□□□□ -0.53
CTCFL-220ENST00000608858 FAM196BA6NMK8 535 aa11.73□□□□□ -0.53
CTCFL-220ENST00000608858 COL2A1P02458 1487 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-220ENST00000608858 CNGA1P29973 690 aa11.73□□□□□ -0.53
CTCFL-220ENST00000608858 SMAD3P84022 425 aaKnown RBP11.73□□□□□ -0.53
CTCFL-220ENST00000608858 LRRC24Q50LG9 513 aa11.73□□□□□ -0.53
CTCFL-220ENST00000608858 SH3RF1Q7Z6J0 888 aa11.73□□□□□ -0.53
CTCFL-220ENST00000608858 ASB2Q96Q27 587 aa11.73□□□□□ -0.53
CTCFL-220ENST00000608858 UHRF1Q96T88 793 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-220ENST00000608858 NUDT12Q9BQG2 462 aa11.73□□□□□ -0.53
CTCFL-220ENST00000608858 ASCC2Q9H1I8 757 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-220ENST00000608858 A0A1B0GUL6 1792 aa11.72□□□□□ -0.53
CTCFL-220ENST00000608858 ZKSCAN1P17029 563 aaPredicted RBP11.72□□□□□ -0.53
CTCFL-220ENST00000608858 ZEB1P37275 1124 aaPredicted RBP11.72□□□□□ -0.53
CTCFL-220ENST00000608858 RGS3P49796 1198 aa11.72□□□□□ -0.53
CTCFL-220ENST00000608858 HMGCS2P54868 508 aa11.72□□□□□ -0.53
CTCFL-220ENST00000608858 FLIIQ13045 1269 aa11.72□□□□□ -0.53
CTCFL-220ENST00000608858 Q3C1V9 767 aa11.72□□□□□ -0.53
CTCFL-220ENST00000608858 GJC2Q5T442 439 aaPredicted RBP11.72□□□□□ -0.53
CTCFL-220ENST00000608858 ALYREFQ86V81 257 aaKnown RBP11.72□□□□□ -0.53
CTCFL-220ENST00000608858 P2RX7Q99572 595 aaKnown RBP11.72□□□□□ -0.53
CTCFL-220ENST00000608858 PNMA3Q9UL41 463 aa11.72□□□□□ -0.53
CTCFL-220ENST00000608858 TCF20Q9UGU0 1960 aaKnown RBP11.71□□□□□ -0.53
CTCFL-220ENST00000608858 DDTLA6NHG4 134 aaPredicted RBP11.71□□□□□ -0.53
CTCFL-220ENST00000608858 CTNND1O60716 968 aaKnown RBP11.71□□□□□ -0.53
CTCFL-220ENST00000608858 GCLCP48506 637 aaPredicted RBP11.71□□□□□ -0.53
CTCFL-220ENST00000608858 EVX2Q03828 476 aa11.71□□□□□ -0.53
CTCFL-220ENST00000608858 PICALMQ13492 652 aa11.71□□□□□ -0.53
CTCFL-220ENST00000608858 METTL24Q5JXM2 366 aa11.71□□□□□ -0.53
CTCFL-220ENST00000608858 POTEEQ6S8J3 1075 aa11.71□□□□□ -0.53
CTCFL-220ENST00000608858 CHMP4AQ9BY43 222 aa11.71□□□□□ -0.53
CTCFL-220ENST00000608858 RPAP1Q9BWH6 1393 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-220ENST00000608858 PLXNB2O15031 1838 aa11.7□□□□□ -0.54
CTCFL-220ENST00000608858 MAST3O60307 1309 aa11.7□□□□□ -0.54
CTCFL-220ENST00000608858 TRIM43BA6NCK2 446 aa11.7□□□□□ -0.54
CTCFL-220ENST00000608858 EPHB4P54760 987 aa11.7□□□□□ -0.54
CTCFL-220ENST00000608858 TWISTNBQ3B726 338 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-220ENST00000608858 ANO1Q5XXA6 986 aa11.7□□□□□ -0.54
CTCFL-220ENST00000608858 CCAR1Q8IX12 1150 aaKnown RBP11.7□□□□□ -0.54
CTCFL-220ENST00000608858 KLHDC4Q8TBB5 520 aa11.7□□□□□ -0.54
CTCFL-220ENST00000608858 TRIM43Q96BQ3 446 aaPredicted RBP11.7□□□□□ -0.54
CTCFL-220ENST00000608858 TXNRD2Q9NNW7 524 aa11.7□□□□□ -0.54
CTCFL-220ENST00000608858 BDP1A6H8Y1 2624 aa11.7□□□□□ -0.54
CTCFL-220ENST00000608858 PRDX5P30044 214 aa11.69□□□□□ -0.54
CTCFL-220ENST00000608858 MRPS5P82675 430 aaKnown RBP11.69□□□□□ -0.54
CTCFL-220ENST00000608858 SLC39A5Q6ZMH5 540 aa11.69□□□□□ -0.54
CTCFL-220ENST00000608858 GPRC5AQ8NFJ5 357 aa11.69□□□□□ -0.54
CTCFL-220ENST00000608858 ATXN2LQ8WWM7 1075 aaKnown RBP11.69□□□□□ -0.54
CTCFL-220ENST00000608858 FERMT2Q96AC1 680 aa11.69□□□□□ -0.54
CTCFL-220ENST00000608858 RNPC3Q96LT9 517 aaKnown RBP11.69□□□□□ -0.54
CTCFL-220ENST00000608858 ZNF576Q9H609 170 aa11.69□□□□□ -0.54
CTCFL-220ENST00000608858 C9orf78Q9NZ63 289 aaPredicted RBP11.69□□□□□ -0.54
CTCFL-220ENST00000608858 FLRT1Q9NZU1 646 aa11.69□□□□□ -0.54
CTCFL-220ENST00000608858 XRCC5P13010 732 aaKnown RBP11.68□□□□□ -0.54
CTCFL-220ENST00000608858 IGFBP4P22692 258 aa11.68□□□□□ -0.54
CTCFL-220ENST00000608858 ITGB8P26012 769 aa11.68□□□□□ -0.54
CTCFL-220ENST00000608858 CALD1Q05682 793 aaKnown RBP11.68□□□□□ -0.54
CTCFL-220ENST00000608858 TRIM60Q495X7 471 aa11.68□□□□□ -0.54
CTCFL-220ENST00000608858 BEND3Q5T5X7 828 aa11.68□□□□□ -0.54
CTCFL-220ENST00000608858 PROCA1Q8NCQ7 364 aaPredicted RBP11.68□□□□□ -0.54
CTCFL-220ENST00000608858 ZNF280CQ8ND82 737 aa11.68□□□□□ -0.54
CTCFL-220ENST00000608858 IL27Q8NEV9 243 aa11.68□□□□□ -0.54
CTCFL-220ENST00000608858 PAGR1Q9BTK6 254 aa11.68□□□□□ -0.54
CTCFL-220ENST00000608858 LRFN3Q9BTN0 628 aa11.68□□□□□ -0.54
CTCFL-220ENST00000608858 PORCNQ9H237 461 aa11.68□□□□□ -0.54
CTCFL-220ENST00000608858 PRDM12Q9H4Q4 367 aa11.68□□□□□ -0.54
CTCFL-220ENST00000608858 EPHX3Q9H6B9 360 aa11.68□□□□□ -0.54
CTCFL-220ENST00000608858 RBPJLQ9UBG7 517 aa11.68□□□□□ -0.54
CTCFL-220ENST00000608858 SUGT1Q9Y2Z0 365 aa11.68□□□□□ -0.54
CTCFL-220ENST00000608858 MROH5Q6ZUA9 1318 aa11.67□□□□□ -0.54
CTCFL-220ENST00000608858 GRM8O00222 908 aa11.67□□□□□ -0.54
CTCFL-220ENST00000608858 PDE8BO95263 885 aa11.67□□□□□ -0.54
CTCFL-220ENST00000608858 LDHBP07195 334 aaKnown RBP11.67□□□□□ -0.54
CTCFL-220ENST00000608858 IRX3P78415 501 aaPredicted RBP11.67□□□□□ -0.54
CTCFL-220ENST00000608858 PABPC4Q13310 644 aaKnown RBP eCLIP11.67□□□□□ -0.54
CTCFL-220ENST00000608858 RRP1BQ14684 758 aaKnown RBP11.67□□□□□ -0.54
CTCFL-220ENST00000608858 WDR66Q8TBY9 1149 aa11.67□□□□□ -0.54
CTCFL-220ENST00000608858 USP6NLQ92738 828 aa11.67□□□□□ -0.54
CTCFL-220ENST00000608858 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
CTCFL-220ENST00000608858 SUCLG2Q96I99 432 aa11.67□□□□□ -0.54
CTCFL-220ENST00000608858 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.67□□□□□ -0.54
CTCFL-220ENST00000608858 CWC22Q9HCG8 908 aaKnown RBP11.67□□□□□ -0.54
CTCFL-220ENST00000608858 DDX4Q9NQI0 724 aaKnown RBP11.67□□□□□ -0.54
CTCFL-220ENST00000608858 THEGQ9P2T0 379 aa11.67□□□□□ -0.54
CTCFL-220ENST00000608858 MORF4L1Q9UBU8 362 aa11.67□□□□□ -0.54
CTCFL-220ENST00000608858 MYO9BQ13459 2157 aa11.67□□□□□ -0.54
CTCFL-220ENST00000608858 ATRNL1Q5VV63 1379 aa11.67□□□□□ -0.54
CTCFL-220ENST00000608858 PTPRFP10586 1907 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 PHIPQ8WWQ0 1821 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 GRXCR1A8MXD5 290 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 DNAJB2P25686 324 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 CYP2C19P33261 490 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 PBX2P40425 430 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 RGS2P41220 211 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 ADCYAP1R1P41586 468 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 MAP3K10Q02779 954 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 WDR78Q5VTH9 848 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 SLC4A10Q6U841 1118 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 GPR142Q7Z601 462 aa11.66□□□□□ -0.54
CTCFL-220ENST00000608858 PLEKHH3Q7Z736 793 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms