RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 HSD3B7Q9H2F3 369 aa13.5□□□□□ -0.25
CTCFL-217ENST00000608425 LMCD1Q9NZU5 365 aa13.5□□□□□ -0.25
CTCFL-217ENST00000608425 NDUFAB1O14561 156 aa13.5□□□□□ -0.25
CTCFL-217ENST00000608425 AKAP17AQ02040 695 aaKnown RBP13.5□□□□□ -0.25
CTCFL-217ENST00000608425 CFAP100Q494V2 611 aa13.5□□□□□ -0.25
CTCFL-217ENST00000608425 SDF4Q9BRK5 362 aa13.5□□□□□ -0.25
CTCFL-217ENST00000608425 CDC23Q9UJX2 597 aa13.5□□□□□ -0.25
CTCFL-217ENST00000608425 PNMA6EA0A0J9YXQ4 647 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 GOLGA6CA6NDK9 693 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 OPLAHO14841 1288 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 MYO1BO43795 1136 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 ABL1P00519 1130 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 GOLGA6DP0CG33 693 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 AARSP49588 968 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTCFL-217ENST00000608425 UBASH3AP57075 661 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 ATP8B2P98198 1209 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 PDCLQ13371 301 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 CCDC13Q8IYE1 715 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 FSIP1Q8NA03 581 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 ENGASEQ8NFI3 743 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 NECTIN2Q92692 538 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 SH2B1Q9NRF2 756 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-217ENST00000608425 GOLGA6AQ9NYA3 693 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 PARP4Q9UKK3 1724 aaKnown RBP13.49□□□□□ -0.25
CTCFL-217ENST00000608425 A0A1B0GVL5 298 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 ARHGAP6O43182 974 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 RESTQ13127 1097 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 MPRIPQ6WCQ1 1025 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 CCDC73Q6ZRK6 1079 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 SAAL1Q96ER3 474 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 YIPF3Q9GZM5 350 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 TPX2Q9ULW0 747 aaKnown RBP13.49□□□□□ -0.25
CTCFL-217ENST00000608425 CYP46A1Q9Y6A2 500 aa13.49□□□□□ -0.25
CTCFL-217ENST00000608425 ANKRD18BA2A2Z9 1011 aa13.48□□□□□ -0.25
CTCFL-217ENST00000608425 SLC5A9Q2M3M2 681 aa13.48□□□□□ -0.25
CTCFL-217ENST00000608425 SPRED3Q2MJR0 410 aa13.48□□□□□ -0.25
CTCFL-217ENST00000608425 CCDC181Q5TID7 509 aa13.48□□□□□ -0.25
CTCFL-217ENST00000608425 ZSCAN31Q96LW9 406 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-217ENST00000608425 MRC1P22897 1456 aa13.48□□□□□ -0.25
CTCFL-217ENST00000608425 EIF4E1BA6NMX2 242 aaKnown RBP13.48□□□□□ -0.25
CTCFL-217ENST00000608425 SERPINC1P01008 464 aa13.48□□□□□ -0.25
CTCFL-217ENST00000608425 KIF4BQ2VIQ3 1234 aa13.48□□□□□ -0.25
CTCFL-217ENST00000608425 NCAPH2Q6IBW4 605 aa13.48□□□□□ -0.25
CTCFL-217ENST00000608425 BRF1Q92994 677 aa13.48□□□□□ -0.25
CTCFL-217ENST00000608425 TEX13AQ9BXU3 409 aaPredicted RBP13.48□□□□□ -0.25
CTCFL-217ENST00000608425 USP44Q9H0E7 712 aa13.48□□□□□ -0.25
CTCFL-217ENST00000608425 SIL1Q9H173 461 aa13.48□□□□□ -0.25
CTCFL-217ENST00000608425 PHAXQ9H814 394 aaKnown RBP13.48□□□□□ -0.25
CTCFL-217ENST00000608425 TAF6LQ9Y6J9 622 aa13.48□□□□□ -0.25
CTCFL-217ENST00000608425 CPDO75976 1380 aa13.48□□□□□ -0.25
CTCFL-217ENST00000608425 TMCO5BA8MYB1 307 aa13.47□□□□□ -0.25
CTCFL-217ENST00000608425 ZEB2O60315 1214 aa13.47□□□□□ -0.25
CTCFL-217ENST00000608425 UBTFL1P0CB47 393 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-217ENST00000608425 TOP1P11387 765 aaKnown RBP13.47□□□□□ -0.25
CTCFL-217ENST00000608425 SMTNP53814 917 aa13.47□□□□□ -0.25
CTCFL-217ENST00000608425 ICA1Q05084 483 aa13.47□□□□□ -0.25
CTCFL-217ENST00000608425 SF3B2Q13435 895 aaKnown RBP13.47□□□□□ -0.25
CTCFL-217ENST00000608425 STIM1Q13586 685 aa13.47□□□□□ -0.25
CTCFL-217ENST00000608425 PAIP2Q9BPZ3 127 aaKnown RBP13.47□□□□□ -0.25
CTCFL-217ENST00000608425 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
CTCFL-217ENST00000608425 SLC39A2Q9NP94 309 aa13.47□□□□□ -0.25
CTCFL-217ENST00000608425 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.47□□□□□ -0.25
CTCFL-217ENST00000608425 CHPF2Q9P2E5 772 aa13.47□□□□□ -0.25
CTCFL-217ENST00000608425 SNCBQ16143 134 aa13.47□□□□□ -0.25
CTCFL-217ENST00000608425 ZNF569Q5MCW4 686 aa13.47□□□□□ -0.25
CTCFL-217ENST00000608425 TBC1D31Q96DN5 1066 aa13.47□□□□□ -0.25
CTCFL-217ENST00000608425 DBF4Q9UBU7 674 aaPredicted RBP13.47□□□□□ -0.25
CTCFL-217ENST00000608425 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
CTCFL-217ENST00000608425 EZRP15311 586 aaKnown RBP13.46□□□□□ -0.25
CTCFL-217ENST00000608425 PARP9Q8IXQ6 854 aa13.46□□□□□ -0.25
CTCFL-217ENST00000608425 RPUSD2Q8IZ73 545 aaKnown RBP13.46□□□□□ -0.25
CTCFL-217ENST00000608425 ZSWIM6Q9HCJ5 1215 aa13.46□□□□□ -0.25
CTCFL-217ENST00000608425 RAB11FIP3O75154 756 aa13.46□□□□□ -0.25
CTCFL-217ENST00000608425 PYGBP11216 843 aa13.46□□□□□ -0.25
CTCFL-217ENST00000608425 PDCP20941 246 aa13.46□□□□□ -0.25
CTCFL-217ENST00000608425 ADD1P35611 737 aaKnown RBP13.46□□□□□ -0.25
CTCFL-217ENST00000608425 PPFIA1Q13136 1202 aa13.46□□□□□ -0.25
CTCFL-217ENST00000608425 USP28Q96RU2 1077 aa13.46□□□□□ -0.25
CTCFL-217ENST00000608425 VCPKMTQ9H867 229 aa13.46□□□□□ -0.25
CTCFL-217ENST00000608425 INTS13Q9NVM9 706 aa13.46□□□□□ -0.25
CTCFL-217ENST00000608425 C5P01031 1676 aa13.46□□□□□ -0.26
CTCFL-217ENST00000608425 STRCQ7RTU9 1775 aa13.46□□□□□ -0.26
CTCFL-217ENST00000608425 SOWAHDA6NJG2 315 aa13.46□□□□□ -0.26
CTCFL-217ENST00000608425 KCNQ3O43525 872 aa13.46□□□□□ -0.26
CTCFL-217ENST00000608425 GIGYF1O75420 1035 aaPredicted RBP13.46□□□□□ -0.26
CTCFL-217ENST00000608425 ATP1A2P50993 1020 aa13.46□□□□□ -0.26
CTCFL-217ENST00000608425 IFT88Q13099 833 aa13.46□□□□□ -0.26
CTCFL-217ENST00000608425 CYB5D1Q6P9G0 228 aa13.46□□□□□ -0.26
CTCFL-217ENST00000608425 TTLL7Q6ZT98 887 aa13.46□□□□□ -0.26
CTCFL-217ENST00000608425 CDC5LQ99459 802 aaKnown RBP13.46□□□□□ -0.26
CTCFL-217ENST00000608425 TMEM165Q9HC07 324 aa13.46□□□□□ -0.26
CTCFL-217ENST00000608425 HAUS2Q9NVX0 235 aa13.46□□□□□ -0.26
CTCFL-217ENST00000608425 ZNF232Q9UNY5 417 aa13.46□□□□□ -0.26
CTCFL-217ENST00000608425 MEGF6O75095 1541 aa13.46□□□□□ -0.26
CTCFL-217ENST00000608425 ME1P48163 572 aa13.45□□□□□ -0.26
CTCFL-217ENST00000608425 ZC3H6P61129 1189 aaKnown RBP13.45□□□□□ -0.26
CTCFL-217ENST00000608425 FAM160A1Q05DH4 1040 aa13.45□□□□□ -0.26
CTCFL-217ENST00000608425 SF3A1Q15459 793 aaKnown RBP13.45□□□□□ -0.26
CTCFL-217ENST00000608425 VSTM4Q8IW00 320 aa13.45□□□□□ -0.26
CTCFL-217ENST00000608425 DRAXINQ8NBI3 349 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms