RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 ZHX2Q9Y6X8 837 aa20.02■□□□□ 0.8
LINC00240-203ENST00000606878 COL2A1P02458 1487 aaPredicted RBP20.01■□□□□ 0.79
LINC00240-203ENST00000606878 TSHZ3Q63HK5 1081 aa20.01■□□□□ 0.79
LINC00240-203ENST00000606878 TTC6Q86TZ1 520 aa20.01■□□□□ 0.79
LINC00240-203ENST00000606878 CRACR2BQ8N4Y2 399 aaPredicted RBP20.01■□□□□ 0.79
LINC00240-203ENST00000606878 FAM196BA6NMK8 535 aa20■□□□□ 0.79
LINC00240-203ENST00000606878 CXCL11O14625 94 aa20■□□□□ 0.79
LINC00240-203ENST00000606878 GLRX3O76003 335 aaKnown RBP20■□□□□ 0.79
LINC00240-203ENST00000606878 PTPRAP18433 802 aa20■□□□□ 0.79
LINC00240-203ENST00000606878 MX1P20591 662 aa20■□□□□ 0.79
LINC00240-203ENST00000606878 NOM1Q5C9Z4 860 aaKnown RBP20■□□□□ 0.79
LINC00240-203ENST00000606878 GPR25O00155 361 aa19.99■□□□□ 0.79
LINC00240-203ENST00000606878 LRRFIP1Q32MZ4 808 aaKnown RBP19.99■□□□□ 0.79
LINC00240-203ENST00000606878 METTL16Q86W50 562 aaKnown RBP19.99■□□□□ 0.79
LINC00240-203ENST00000606878 SMC5Q8IY18 1101 aa19.99■□□□□ 0.79
LINC00240-203ENST00000606878 KBTBD3Q8NAB2 608 aa19.99■□□□□ 0.79
LINC00240-203ENST00000606878 OTUD7AQ8TE49 926 aaPredicted RBP19.99■□□□□ 0.79
LINC00240-203ENST00000606878 KCNH4Q9UQ05 1017 aa19.99■□□□□ 0.79
LINC00240-203ENST00000606878 IGHDP01880 384 aa19.98■□□□□ 0.79
LINC00240-203ENST00000606878 CAP2P40123 477 aa19.98■□□□□ 0.79
LINC00240-203ENST00000606878 R3HDMLQ9H3Y0 253 aa19.98■□□□□ 0.79
LINC00240-203ENST00000606878 ARMT1Q9H993 441 aa19.98■□□□□ 0.79
LINC00240-203ENST00000606878 MYO5AQ9Y4I1 1855 aaKnown RBP19.97■□□□□ 0.79
LINC00240-203ENST00000606878 POLR3DP05423 398 aaPredicted RBP19.97■□□□□ 0.79
LINC00240-203ENST00000606878 SLFNL1Q499Z3 407 aa19.97■□□□□ 0.79
LINC00240-203ENST00000606878 B4GALNT3Q6L9W6 998 aa19.97■□□□□ 0.79
LINC00240-203ENST00000606878 LCORLQ8N3X6 602 aa19.97■□□□□ 0.79
LINC00240-203ENST00000606878 PI4K2BQ8TCG2 481 aa19.97■□□□□ 0.79
LINC00240-203ENST00000606878 ZNF296Q8WUU4 475 aaPredicted RBP19.97■□□□□ 0.79
LINC00240-203ENST00000606878 ZFYVE28Q9HCC9 887 aa19.97■□□□□ 0.79
LINC00240-203ENST00000606878 ZCCHC17Q9NP64 241 aaKnown RBP19.97■□□□□ 0.79
LINC00240-203ENST00000606878 AFG3L2Q9Y4W6 797 aa19.97■□□□□ 0.79
LINC00240-203ENST00000606878 BTBD19C9JJ37 291 aa19.96■□□□□ 0.79
LINC00240-203ENST00000606878 RNF113AO15541 343 aaKnown RBP19.96■□□□□ 0.79
LINC00240-203ENST00000606878 FKTNO75072 461 aa19.96■□□□□ 0.79
LINC00240-203ENST00000606878 MBD4O95243 580 aa19.96■□□□□ 0.79
LINC00240-203ENST00000606878 ZFYP08048 801 aaPredicted RBP19.96■□□□□ 0.79
LINC00240-203ENST00000606878 IRX6P78412 446 aaPredicted RBP19.96■□□□□ 0.79
LINC00240-203ENST00000606878 CRHR2Q13324 411 aa19.96■□□□□ 0.79
LINC00240-203ENST00000606878 TAF1CQ15572 869 aaPredicted RBP19.96■□□□□ 0.79
LINC00240-203ENST00000606878 SLC4A8Q2Y0W8 1093 aa19.96■□□□□ 0.79
LINC00240-203ENST00000606878 IFFO2Q5TF58 517 aa19.96■□□□□ 0.79
LINC00240-203ENST00000606878 FASTKD5Q7L8L6 764 aaKnown RBP19.96■□□□□ 0.79
LINC00240-203ENST00000606878 FAM43AQ8N2R8 423 aa19.96■□□□□ 0.79
LINC00240-203ENST00000606878 MCM9Q9NXL9 1143 aa19.96■□□□□ 0.79
LINC00240-203ENST00000606878 STAP2Q9UGK3 403 aa19.96■□□□□ 0.79
LINC00240-203ENST00000606878 SERPINB13Q9UIV8 391 aa19.96■□□□□ 0.79
LINC00240-203ENST00000606878 RRP1BQ14684 758 aaKnown RBP19.95■□□□□ 0.78
LINC00240-203ENST00000606878 SDR42E1Q8WUS8 393 aa19.95■□□□□ 0.78
LINC00240-203ENST00000606878 DDRGK1Q96HY6 314 aa19.95■□□□□ 0.78
LINC00240-203ENST00000606878 TBC1D2Q9BYX2 928 aa19.95■□□□□ 0.78
LINC00240-203ENST00000606878 LNPKQ9C0E8 428 aa19.95■□□□□ 0.78
LINC00240-203ENST00000606878 EHD4Q9H223 541 aa19.95■□□□□ 0.78
LINC00240-203ENST00000606878 DCP1AQ9NPI6 582 aaPredicted RBP19.95■□□□□ 0.78
LINC00240-203ENST00000606878 ATP8A2Q9NTI2 1148 aa19.95■□□□□ 0.78
LINC00240-203ENST00000606878 GINM1Q9NU53 330 aa19.95■□□□□ 0.78
LINC00240-203ENST00000606878 CASP8AP2Q9UKL3 1982 aa19.95■□□□□ 0.78
LINC00240-203ENST00000606878 MAST2Q6P0Q8 1798 aa19.95■□□□□ 0.78
LINC00240-203ENST00000606878 USP17L5A8MUK1 530 aa19.94■□□□□ 0.78
LINC00240-203ENST00000606878 CHGBP05060 677 aa19.94■□□□□ 0.78
LINC00240-203ENST00000606878 ASNSP08243 561 aa19.94■□□□□ 0.78
LINC00240-203ENST00000606878 PDE1AP54750 535 aa19.94■□□□□ 0.78
LINC00240-203ENST00000606878 DGKZQ13574 1117 aa19.94■□□□□ 0.78
LINC00240-203ENST00000606878 ANKRD23Q86SG2 305 aa19.94■□□□□ 0.78
LINC00240-203ENST00000606878 PUS7LQ9H0K6 701 aaKnown RBP19.94■□□□□ 0.78
LINC00240-203ENST00000606878 PRKAB2O43741 272 aa19.93■□□□□ 0.78
LINC00240-203ENST00000606878 PLCD1P51178 756 aa19.93■□□□□ 0.78
LINC00240-203ENST00000606878 SPP2Q13103 211 aa19.93■□□□□ 0.78
LINC00240-203ENST00000606878 CTU1Q7Z7A3 348 aaKnown RBP19.93■□□□□ 0.78
LINC00240-203ENST00000606878 CHD1LQ86WJ1 897 aa19.93■□□□□ 0.78
LINC00240-203ENST00000606878 ZNF280CQ8ND82 737 aa19.93■□□□□ 0.78
LINC00240-203ENST00000606878 APPBP2Q92624 585 aa19.93■□□□□ 0.78
LINC00240-203ENST00000606878 DNAJC18Q9H819 358 aa19.93■□□□□ 0.78
LINC00240-203ENST00000606878 AS3MTQ9HBK9 375 aa19.93■□□□□ 0.78
LINC00240-203ENST00000606878 SLC4A4Q9Y6R1 1079 aa19.93■□□□□ 0.78
LINC00240-203ENST00000606878 OTOFQ9HC10 1997 aa19.93■□□□□ 0.78
LINC00240-203ENST00000606878 SALL3Q9BXA9 1300 aa19.93■□□□□ 0.78
LINC00240-203ENST00000606878 A0A0G2JLL6 359 aaPredicted RBP19.92■□□□□ 0.78
LINC00240-203ENST00000606878 TRIM75PA6NK02 468 aa19.92■□□□□ 0.78
LINC00240-203ENST00000606878 PDHXO00330 501 aa19.92■□□□□ 0.78
LINC00240-203ENST00000606878 NUCB1Q02818 461 aa19.92■□□□□ 0.78
LINC00240-203ENST00000606878 TATDN1Q6P1N9 297 aa19.92■□□□□ 0.78
LINC00240-203ENST00000606878 PRRT2Q7Z6L0 340 aaPredicted RBP19.92■□□□□ 0.78
LINC00240-203ENST00000606878 CCDC84Q86UT8 332 aaPredicted RBP19.92■□□□□ 0.78
LINC00240-203ENST00000606878 AMOTL1Q8IY63 956 aa19.92■□□□□ 0.78
LINC00240-203ENST00000606878 STRBPQ96SI9 672 aaKnown RBP19.92■□□□□ 0.78
LINC00240-203ENST00000606878 FSD1Q9BTV5 496 aa19.92■□□□□ 0.78
LINC00240-203ENST00000606878 MCOLN1Q9GZU1 580 aa19.92■□□□□ 0.78
LINC00240-203ENST00000606878 DOCK2Q92608 1830 aa19.91■□□□□ 0.78
LINC00240-203ENST00000606878 MOGSQ13724 837 aa19.91■□□□□ 0.78
LINC00240-203ENST00000606878 EVI5LQ96CN4 794 aa19.91■□□□□ 0.78
LINC00240-203ENST00000606878 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.91■□□□□ 0.78
LINC00240-203ENST00000606878 TLR2O60603 784 aa19.9■□□□□ 0.78
LINC00240-203ENST00000606878 GDF11O95390 407 aa19.9■□□□□ 0.78
LINC00240-203ENST00000606878 SP3Q02447 781 aa19.9■□□□□ 0.78
LINC00240-203ENST00000606878 CERKLQ49MI3 558 aaPredicted RBP19.9■□□□□ 0.78
LINC00240-203ENST00000606878 GADL1Q6ZQY3 521 aa19.9■□□□□ 0.78
LINC00240-203ENST00000606878 OSBP2Q969R2 916 aa19.9■□□□□ 0.78
LINC00240-203ENST00000606878 ERO1AQ96HE7 468 aa19.9■□□□□ 0.78
LINC00240-203ENST00000606878 WDR18Q9BV38 432 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms