RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 MIGA2Q7L4E1 593 aa17.12■□□□□ 0.33
CTSA-211ENST00000606066 CTU1Q7Z7A3 348 aaKnown RBP17.12■□□□□ 0.33
CTSA-211ENST00000606066 TTC6Q86TZ1 520 aa17.12■□□□□ 0.33
CTSA-211ENST00000606066 FOXP4Q8IVH2 680 aaPredicted RBP17.12■□□□□ 0.33
CTSA-211ENST00000606066 ANKRD13AQ8IZ07 590 aa17.12■□□□□ 0.33
CTSA-211ENST00000606066 PAPPA2Q9BXP8 1791 aa17.11■□□□□ 0.33
CTSA-211ENST00000606066 POLR3DP05423 398 aaPredicted RBP17.11■□□□□ 0.33
CTSA-211ENST00000606066 MAP3K9P80192 1104 aa17.11■□□□□ 0.33
CTSA-211ENST00000606066 MAP3K10Q02779 954 aa17.11■□□□□ 0.33
CTSA-211ENST00000606066 MCMDC2Q4G0Z9 681 aa17.11■□□□□ 0.33
CTSA-211ENST00000606066 RASAL3Q86YV0 1011 aa17.11■□□□□ 0.33
CTSA-211ENST00000606066 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
CTSA-211ENST00000606066 SDR42E1Q8WUS8 393 aa17.11■□□□□ 0.33
CTSA-211ENST00000606066 TRIM34Q9BYJ4 488 aa17.11■□□□□ 0.33
CTSA-211ENST00000606066 DCP1AQ9NPI6 582 aaPredicted RBP17.11■□□□□ 0.33
CTSA-211ENST00000606066 DIAPH3Q9NSV4 1193 aa17.11■□□□□ 0.33
CTSA-211ENST00000606066 MCM9Q9NXL9 1143 aa17.11■□□□□ 0.33
CTSA-211ENST00000606066 SAP30BPQ9UHR5 308 aaKnown RBP17.11■□□□□ 0.33
CTSA-211ENST00000606066 HERC5Q9UII4 1024 aaKnown RBP17.11■□□□□ 0.33
CTSA-211ENST00000606066 PALD1Q9ULE6 856 aa17.11■□□□□ 0.33
CTSA-211ENST00000606066 FZD1Q9UP38 647 aa17.11■□□□□ 0.33
CTSA-211ENST00000606066 MYO5AQ9Y4I1 1855 aaKnown RBP17.1■□□□□ 0.33
CTSA-211ENST00000606066 M0R2C6 588 aa17.1■□□□□ 0.33
CTSA-211ENST00000606066 PRKAB2O43741 272 aa17.1■□□□□ 0.33
CTSA-211ENST00000606066 PKN2Q16513 984 aaKnown RBP17.1■□□□□ 0.33
CTSA-211ENST00000606066 GIMAP6Q6P9H5 292 aa17.1■□□□□ 0.33
CTSA-211ENST00000606066 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.1■□□□□ 0.33
CTSA-211ENST00000606066 WRNIP1Q96S55 665 aa17.1■□□□□ 0.33
CTSA-211ENST00000606066 SEC62Q99442 399 aaKnown RBP17.1■□□□□ 0.33
CTSA-211ENST00000606066 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.1■□□□□ 0.33
CTSA-211ENST00000606066 CSADQ9Y600 493 aa17.1■□□□□ 0.33
CTSA-211ENST00000606066 TNRC18O15417 2968 aaPredicted RBP17.1■□□□□ 0.33
CTSA-211ENST00000606066 PATL2C9JE40 543 aaKnown RBP17.09■□□□□ 0.33
CTSA-211ENST00000606066 APPP05067 770 aa17.09■□□□□ 0.33
CTSA-211ENST00000606066 TM4SF4P48230 202 aa17.09■□□□□ 0.33
CTSA-211ENST00000606066 MFAP1P55081 439 aaKnown RBP17.09■□□□□ 0.33
CTSA-211ENST00000606066 NOM1Q5C9Z4 860 aaKnown RBP17.09■□□□□ 0.33
CTSA-211ENST00000606066 CRACR2BQ8N4Y2 399 aaPredicted RBP17.09■□□□□ 0.33
CTSA-211ENST00000606066 SLC10A4Q96EP9 437 aa17.09■□□□□ 0.33
CTSA-211ENST00000606066 NACAP1Q9BZK3 213 aa17.09■□□□□ 0.33
CTSA-211ENST00000606066 ZNF112Q9UJU3 913 aa17.09■□□□□ 0.33
CTSA-211ENST00000606066 NMIQ13287 307 aaPredicted RBP17.08■□□□□ 0.32
CTSA-211ENST00000606066 METTL16Q86W50 562 aaKnown RBP17.08■□□□□ 0.32
CTSA-211ENST00000606066 FAM227BQ96M60 508 aa17.08■□□□□ 0.32
CTSA-211ENST00000606066 EHD4Q9H223 541 aa17.08■□□□□ 0.32
CTSA-211ENST00000606066 TAOK2Q9UL54 1235 aa17.08■□□□□ 0.32
CTSA-211ENST00000606066 GSG1L2A8MUP6 293 aa17.07■□□□□ 0.32
CTSA-211ENST00000606066 BMP2KLQ5H9B9 411 aa17.07■□□□□ 0.32
CTSA-211ENST00000606066 CWC27Q6UX04 472 aaKnown RBP17.07■□□□□ 0.32
CTSA-211ENST00000606066 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.07■□□□□ 0.32
CTSA-211ENST00000606066 ARPP21Q9UBL0 812 aaPredicted RBP17.07■□□□□ 0.32
CTSA-211ENST00000606066 SERPINB13Q9UIV8 391 aa17.07■□□□□ 0.32
CTSA-211ENST00000606066 CASP8AP2Q9UKL3 1982 aa17.07■□□□□ 0.32
CTSA-211ENST00000606066 A0A0D9SFI3 127 aa17.06■□□□□ 0.32
CTSA-211ENST00000606066 TDO2P48775 406 aa17.06■□□□□ 0.32
CTSA-211ENST00000606066 VGLL4Q14135 290 aa17.06■□□□□ 0.32
CTSA-211ENST00000606066 SLC4A8Q2Y0W8 1093 aa17.06■□□□□ 0.32
CTSA-211ENST00000606066 SKAP1Q86WV1 359 aa17.06■□□□□ 0.32
CTSA-211ENST00000606066 RUFY2Q8WXA3 655 aa17.06■□□□□ 0.32
CTSA-211ENST00000606066 PDE4DIPQ5VU43 2346 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 PHF20L1A8MW92 1017 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 USP17L12C9JPN9 530 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 USP17L21D6R901 530 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 CTNND1O60716 968 aaKnown RBP17.05■□□□□ 0.32
CTSA-211ENST00000606066 PLCD1P51178 756 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 SOX10P56693 466 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 SBK1Q52WX2 424 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 NOL9Q5SY16 702 aaKnown RBP17.05■□□□□ 0.32
CTSA-211ENST00000606066 CCDC129Q6ZRS4 1044 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 IFNL3Q8IZI9 196 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 ZKSCAN4Q969J2 545 aaPredicted RBP17.05■□□□□ 0.32
CTSA-211ENST00000606066 CLMNQ96JQ2 1002 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 CFHR5Q9BXR6 569 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 NAPBQ9H115 298 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 ELP3Q9H9T3 547 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
CTSA-211ENST00000606066 HPS5Q9UPZ3 1129 aa17.05■□□□□ 0.32
CTSA-211ENST00000606066 CCDC171Q6TFL3 1326 aa17.04■□□□□ 0.32
CTSA-211ENST00000606066 ZBTB48P10074 688 aaPredicted RBP17.04■□□□□ 0.32
CTSA-211ENST00000606066 INPP5BP32019 993 aa17.04■□□□□ 0.32
CTSA-211ENST00000606066 C12orf60Q5U649 245 aa17.04■□□□□ 0.32
CTSA-211ENST00000606066 CTR9Q6PD62 1173 aa17.04■□□□□ 0.32
CTSA-211ENST00000606066 SCYL3Q8IZE3 742 aa17.04■□□□□ 0.32
CTSA-211ENST00000606066 ZNF296Q8WUU4 475 aaPredicted RBP17.04■□□□□ 0.32
CTSA-211ENST00000606066 PICK1Q9NRD5 415 aa17.04■□□□□ 0.32
CTSA-211ENST00000606066 SWAP70Q9UH65 585 aa17.04■□□□□ 0.32
CTSA-211ENST00000606066 MYH7P12883 1935 aa17.04■□□□□ 0.32
CTSA-211ENST00000606066 RAD50Q92878 1312 aa17.03■□□□□ 0.32
CTSA-211ENST00000606066 FAM196BA6NMK8 535 aa17.03■□□□□ 0.32
CTSA-211ENST00000606066 TBC1D8O95759 1140 aa17.03■□□□□ 0.32
CTSA-211ENST00000606066 CHMLP26374 656 aa17.03■□□□□ 0.32
CTSA-211ENST00000606066 SPRYD7Q5W111 196 aa17.03■□□□□ 0.32
CTSA-211ENST00000606066 ERO1BQ86YB8 467 aa17.03■□□□□ 0.32
CTSA-211ENST00000606066 OPTNQ96CV9 577 aa17.03■□□□□ 0.32
CTSA-211ENST00000606066 GINM1Q9NU53 330 aa17.03■□□□□ 0.32
CTSA-211ENST00000606066 SNCAIPQ9Y6H5 919 aa17.03■□□□□ 0.32
CTSA-211ENST00000606066 SPDYE5A6NIY4 337 aa17.02■□□□□ 0.32
CTSA-211ENST00000606066 MINDY4BA8MYZ0 360 aa17.02■□□□□ 0.32
CTSA-211ENST00000606066 GPR25O00155 361 aa17.02■□□□□ 0.32
CTSA-211ENST00000606066 SLURP2P0DP57 97 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms