RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 CETPP11597 493 aa23.24■■□□□ 1.31
SRSF4-206ENST00000605204 MS4A4AQ96JQ5 239 aa23.24■■□□□ 1.31
SRSF4-206ENST00000605204 RIOK1Q9BRS2 568 aaKnown RBP23.24■■□□□ 1.31
SRSF4-206ENST00000605204 ZNF532Q9HCE3 1301 aa23.24■■□□□ 1.31
SRSF4-206ENST00000605204 GLRX3O76003 335 aaKnown RBP23.23■■□□□ 1.31
SRSF4-206ENST00000605204 ADD2P35612 726 aa23.23■■□□□ 1.31
SRSF4-206ENST00000605204 USP5P45974 858 aa23.23■■□□□ 1.31
SRSF4-206ENST00000605204 UBE3CQ15386 1083 aa23.23■■□□□ 1.31
SRSF4-206ENST00000605204 LRRFIP1Q32MZ4 808 aaKnown RBP23.23■■□□□ 1.31
SRSF4-206ENST00000605204 FOXP4Q8IVH2 680 aaPredicted RBP23.23■■□□□ 1.31
SRSF4-206ENST00000605204 MAPKAPK5Q8IW41 473 aa23.23■■□□□ 1.31
SRSF4-206ENST00000605204 CRNKL1Q9BZJ0 848 aaKnown RBP23.23■■□□□ 1.31
SRSF4-206ENST00000605204 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.23■■□□□ 1.31
SRSF4-206ENST00000605204 TCRBV5S4A2TA0A5A2 114 aa23.22■■□□□ 1.31
SRSF4-206ENST00000605204 DYNLL1P63167 89 aaKnown RBP23.22■■□□□ 1.31
SRSF4-206ENST00000605204 METTL16Q86W50 562 aaKnown RBP23.22■■□□□ 1.31
SRSF4-206ENST00000605204 TRIM34Q9BYJ4 488 aa23.22■■□□□ 1.31
SRSF4-206ENST00000605204 TBC1D2Q9BYX2 928 aa23.22■■□□□ 1.31
SRSF4-206ENST00000605204 TAOK2Q9UL54 1235 aa23.22■■□□□ 1.31
SRSF4-206ENST00000605204 CCL15-CCL14A0A0B4J2E2 113 aa23.21■■□□□ 1.31
SRSF4-206ENST00000605204 IRF6O14896 467 aa23.21■■□□□ 1.31
SRSF4-206ENST00000605204 CCL15Q16663 113 aa23.21■■□□□ 1.31
SRSF4-206ENST00000605204 CNKSR2Q8WXI2 1034 aa23.21■■□□□ 1.31
SRSF4-206ENST00000605204 EDC3Q96F86 508 aaKnown RBP23.21■■□□□ 1.31
SRSF4-206ENST00000605204 KCNH4Q9UQ05 1017 aa23.21■■□□□ 1.31
SRSF4-206ENST00000605204 IGF2BP3O00425 579 aaKnown RBP eCLIP23.2■■□□□ 1.3
SRSF4-206ENST00000605204 CXCL11O14625 94 aa23.2■■□□□ 1.3
SRSF4-206ENST00000605204 ZFYP08048 801 aaPredicted RBP23.2■■□□□ 1.3
SRSF4-206ENST00000605204 MX1P20591 662 aa23.2■■□□□ 1.3
SRSF4-206ENST00000605204 ANKRD45Q5TZF3 282 aa23.2■■□□□ 1.3
SRSF4-206ENST00000605204 KBTBD3Q8NAB2 608 aa23.2■■□□□ 1.3
SRSF4-206ENST00000605204 EXOC6Q8TAG9 804 aa23.2■■□□□ 1.3
SRSF4-206ENST00000605204 GINM1Q9NU53 330 aa23.2■■□□□ 1.3
SRSF4-206ENST00000605204 TTC6Q86TZ1 520 aa23.19■■□□□ 1.3
SRSF4-206ENST00000605204 SMC5Q8IY18 1101 aa23.19■■□□□ 1.3
SRSF4-206ENST00000605204 CRACR2BQ8N4Y2 399 aaPredicted RBP23.19■■□□□ 1.3
SRSF4-206ENST00000605204 BRI3BPQ8WY22 251 aa23.19■■□□□ 1.3
SRSF4-206ENST00000605204 EHD4Q9H223 541 aa23.19■■□□□ 1.3
SRSF4-206ENST00000605204 RBBP6Q7Z6E9 1792 aaKnown RBP23.19■■□□□ 1.3
SRSF4-206ENST00000605204 PTPRAP18433 802 aa23.18■■□□□ 1.3
SRSF4-206ENST00000605204 AK9Q5TCS8 1911 aa23.18■■□□□ 1.3
SRSF4-206ENST00000605204 FKTNO75072 461 aa23.17■■□□□ 1.3
SRSF4-206ENST00000605204 PKN2Q16513 984 aaKnown RBP23.17■■□□□ 1.3
SRSF4-206ENST00000605204 FBXO46Q6PJ61 603 aaPredicted RBP23.17■■□□□ 1.3
SRSF4-206ENST00000605204 PALD1Q9ULE6 856 aa23.17■■□□□ 1.3
SRSF4-206ENST00000605204 MYO5AQ9Y4I1 1855 aaKnown RBP23.17■■□□□ 1.3
SRSF4-206ENST00000605204 FOCADQ5VW36 1801 aa23.17■■□□□ 1.3
SRSF4-206ENST00000605204 SALL3Q9BXA9 1300 aa23.16■■□□□ 1.3
SRSF4-206ENST00000605204 PI4K2BQ8TCG2 481 aa23.16■■□□□ 1.3
SRSF4-206ENST00000605204 DDRGK1Q96HY6 314 aa23.16■■□□□ 1.3
SRSF4-206ENST00000605204 PTPN18Q99952 460 aa23.16■■□□□ 1.3
SRSF4-206ENST00000605204 ASNSP08243 561 aa23.15■■□□□ 1.3
SRSF4-206ENST00000605204 CAP2P40123 477 aa23.15■■□□□ 1.3
SRSF4-206ENST00000605204 ATP8A2Q9NTI2 1148 aa23.15■■□□□ 1.3
SRSF4-206ENST00000605204 STAP2Q9UGK3 403 aa23.15■■□□□ 1.3
SRSF4-206ENST00000605204 SAP30BPQ9UHR5 308 aaKnown RBP23.15■■□□□ 1.3
SRSF4-206ENST00000605204 SERPINB13Q9UIV8 391 aa23.15■■□□□ 1.3
SRSF4-206ENST00000605204 ZHX2Q9Y6X8 837 aa23.15■■□□□ 1.3
SRSF4-206ENST00000605204 MBD4O95243 580 aa23.14■■□□□ 1.3
SRSF4-206ENST00000605204 TSHZ3Q63HK5 1081 aa23.14■■□□□ 1.3
SRSF4-206ENST00000605204 FASTKD5Q7L8L6 764 aaKnown RBP23.14■■□□□ 1.3
SRSF4-206ENST00000605204 TICAM2Q86XR7 235 aa23.14■■□□□ 1.3
SRSF4-206ENST00000605204 ZFYVE28Q9HCC9 887 aa23.14■■□□□ 1.3
SRSF4-206ENST00000605204 ZSWIM8A7E2V4 1837 aa23.14■■□□□ 1.29
SRSF4-206ENST00000605204 FAM196BA6NMK8 535 aa23.14■■□□□ 1.29
SRSF4-206ENST00000605204 ANKRD23Q86SG2 305 aa23.14■■□□□ 1.29
SRSF4-206ENST00000605204 AMOTL1Q8IY63 956 aa23.14■■□□□ 1.29
SRSF4-206ENST00000605204 LCORLQ8N3X6 602 aa23.14■■□□□ 1.29
SRSF4-206ENST00000605204 APPBP2Q92624 585 aa23.14■■□□□ 1.29
SRSF4-206ENST00000605204 AS3MTQ9HBK9 375 aa23.14■■□□□ 1.29
SRSF4-206ENST00000605204 AFG3L2Q9Y4W6 797 aa23.14■■□□□ 1.29
SRSF4-206ENST00000605204 A0A0G2JLL6 359 aaPredicted RBP23.13■■□□□ 1.29
SRSF4-206ENST00000605204 CAP1Q01518 475 aa23.13■■□□□ 1.29
SRSF4-206ENST00000605204 CRHR2Q13324 411 aa23.13■■□□□ 1.29
SRSF4-206ENST00000605204 TAF1CQ15572 869 aaPredicted RBP23.13■■□□□ 1.29
SRSF4-206ENST00000605204 PRPF38BQ5VTL8 546 aaKnown RBP23.13■■□□□ 1.29
SRSF4-206ENST00000605204 PRRT2Q7Z6L0 340 aaPredicted RBP23.13■■□□□ 1.29
SRSF4-206ENST00000605204 OTUD7AQ8TE49 926 aaPredicted RBP23.13■■□□□ 1.29
SRSF4-206ENST00000605204 ARMT1Q9H993 441 aa23.13■■□□□ 1.29
SRSF4-206ENST00000605204 DOCK1Q14185 1865 aa23.12■■□□□ 1.29
SRSF4-206ENST00000605204 BTBD19C9JJ37 291 aa23.12■■□□□ 1.29
SRSF4-206ENST00000605204 POLR3DP05423 398 aaPredicted RBP23.12■■□□□ 1.29
SRSF4-206ENST00000605204 FAM43AQ8N2R8 423 aa23.12■■□□□ 1.29
SRSF4-206ENST00000605204 DNAJC18Q9H819 358 aa23.12■■□□□ 1.29
SRSF4-206ENST00000605204 DCP1AQ9NPI6 582 aaPredicted RBP23.12■■□□□ 1.29
SRSF4-206ENST00000605204 MCM9Q9NXL9 1143 aa23.12■■□□□ 1.29
SRSF4-206ENST00000605204 USP17L5A8MUK1 530 aa23.11■■□□□ 1.29
SRSF4-206ENST00000605204 RNF113AO15541 343 aaKnown RBP23.11■■□□□ 1.29
SRSF4-206ENST00000605204 PDE1AP54750 535 aa23.11■■□□□ 1.29
SRSF4-206ENST00000605204 TATDN1Q6P1N9 297 aa23.11■■□□□ 1.29
SRSF4-206ENST00000605204 OTOP1Q7RTM1 612 aa23.11■■□□□ 1.29
SRSF4-206ENST00000605204 SLC45A1Q9Y2W3 748 aa23.11■■□□□ 1.29
SRSF4-206ENST00000605204 GNAT2P19087 354 aa23.1■■□□□ 1.29
SRSF4-206ENST00000605204 NUCB1Q02818 461 aa23.1■■□□□ 1.29
SRSF4-206ENST00000605204 CHD1LQ86WJ1 897 aa23.1■■□□□ 1.29
SRSF4-206ENST00000605204 ZNF280CQ8ND82 737 aa23.1■■□□□ 1.29
SRSF4-206ENST00000605204 SDR42E1Q8WUS8 393 aa23.1■■□□□ 1.29
SRSF4-206ENST00000605204 TRIM17Q9Y577 477 aa23.1■■□□□ 1.29
SRSF4-206ENST00000605204 DDX60LQ5H9U9 1706 aaKnown RBP23.1■■□□□ 1.29
SRSF4-206ENST00000605204 CDK5RAP2Q96SN8 1893 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms