RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 CD163Q86VB7 1156 aa11.57□□□□□ -0.56
SGMS1-206ENST00000602565 RNF214Q8ND24 703 aa11.57□□□□□ -0.56
SGMS1-206ENST00000602565 UTP4Q969X6 686 aaKnown RBP11.57□□□□□ -0.56
SGMS1-206ENST00000602565 FERD3LQ96RJ6 166 aa11.57□□□□□ -0.56
SGMS1-206ENST00000602565 YIPF2Q9BWQ6 316 aa11.57□□□□□ -0.56
SGMS1-206ENST00000602565 SSU72Q9NP77 194 aaKnown RBP11.57□□□□□ -0.56
SGMS1-206ENST00000602565 DISC1Q9NRI5 854 aa11.57□□□□□ -0.56
SGMS1-206ENST00000602565 PCDHB14Q9Y5E9 798 aa11.57□□□□□ -0.56
SGMS1-206ENST00000602565 FANCGO15287 622 aa11.56□□□□□ -0.56
SGMS1-206ENST00000602565 HCLS1P14317 486 aaPredicted RBP11.56□□□□□ -0.56
SGMS1-206ENST00000602565 RAB6AP20340 208 aa11.56□□□□□ -0.56
SGMS1-206ENST00000602565 FBXW10Q5XX13 1052 aa11.56□□□□□ -0.56
SGMS1-206ENST00000602565 CPLX3Q8WVH0 158 aa11.56□□□□□ -0.56
SGMS1-206ENST00000602565 MEGF10Q96KG7 1140 aa11.56□□□□□ -0.56
SGMS1-206ENST00000602565 UBL7Q96S82 380 aaPredicted RBP11.56□□□□□ -0.56
SGMS1-206ENST00000602565 FAM105AQ9NUU6 356 aa11.56□□□□□ -0.56
SGMS1-206ENST00000602565 GRK4P32298 578 aa11.55□□□□□ -0.56
SGMS1-206ENST00000602565 SOX9P48436 509 aa11.55□□□□□ -0.56
SGMS1-206ENST00000602565 MLECQ14165 292 aa11.55□□□□□ -0.56
SGMS1-206ENST00000602565 ZBTB37Q5TC79 503 aa11.55□□□□□ -0.56
SGMS1-206ENST00000602565 CDC37L1Q7L3B6 337 aa11.55□□□□□ -0.56
SGMS1-206ENST00000602565 REXO1Q8N1G1 1221 aaKnown RBP11.55□□□□□ -0.56
SGMS1-206ENST00000602565 FAM46AQ96IP4 442 aaKnown RBP11.55□□□□□ -0.56
SGMS1-206ENST00000602565 WNT10AQ9GZT5 417 aa11.55□□□□□ -0.56
SGMS1-206ENST00000602565 PRKAG2Q9UGJ0 569 aa11.55□□□□□ -0.56
SGMS1-206ENST00000602565 POLR3KQ9Y2Y1 108 aaPredicted RBP11.55□□□□□ -0.56
SGMS1-206ENST00000602565 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.54□□□□□ -0.56
SGMS1-206ENST00000602565 SSBP05455 408 aaKnown RBP eCLIP11.54□□□□□ -0.56
SGMS1-206ENST00000602565 PGRP06401 933 aa11.54□□□□□ -0.56
SGMS1-206ENST00000602565 PLCG1P19174 1290 aa11.54□□□□□ -0.56
SGMS1-206ENST00000602565 RXRBP28702 533 aa11.54□□□□□ -0.56
SGMS1-206ENST00000602565 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.54□□□□□ -0.56
SGMS1-206ENST00000602565 ZNF507Q8TCN5 953 aa11.54□□□□□ -0.56
SGMS1-206ENST00000602565 CORINQ9Y5Q5 1042 aa11.54□□□□□ -0.56
SGMS1-206ENST00000602565 GATA4P43694 442 aa11.53□□□□□ -0.56
SGMS1-206ENST00000602565 RING1Q06587 406 aa11.53□□□□□ -0.56
SGMS1-206ENST00000602565 DZIP1LQ8IYY4 767 aaKnown RBP11.53□□□□□ -0.56
SGMS1-206ENST00000602565 GMLQ99445 158 aa11.53□□□□□ -0.56
SGMS1-206ENST00000602565 GSX1Q9H4S2 264 aaPredicted RBP11.53□□□□□ -0.56
SGMS1-206ENST00000602565 PPP1R1BQ9UD71 204 aaPredicted RBP11.53□□□□□ -0.56
SGMS1-206ENST00000602565 STRIP2Q9ULQ0 834 aa11.53□□□□□ -0.56
SGMS1-206ENST00000602565 PPT2Q9UMR5 302 aa11.53□□□□□ -0.56
SGMS1-206ENST00000602565 HTR3BO95264 441 aa11.52□□□□□ -0.57
SGMS1-206ENST00000602565 GDF11O95390 407 aa11.52□□□□□ -0.57
SGMS1-206ENST00000602565 IMPDH2P12268 514 aa11.52□□□□□ -0.57
SGMS1-206ENST00000602565 ATP2B1P20020 1258 aa11.52□□□□□ -0.57
SGMS1-206ENST00000602565 CLCQ05315 142 aa11.52□□□□□ -0.57
SGMS1-206ENST00000602565 SMYD4Q8IYR2 804 aaPredicted RBP11.52□□□□□ -0.57
SGMS1-206ENST00000602565 KCT2Q8NC54 265 aa11.52□□□□□ -0.57
SGMS1-206ENST00000602565 CRBNQ96SW2 442 aa11.52□□□□□ -0.57
SGMS1-206ENST00000602565 BMP3P12645 472 aa11.51□□□□□ -0.57
SGMS1-206ENST00000602565 CCDC81Q6ZN84 652 aa11.51□□□□□ -0.57
SGMS1-206ENST00000602565 MYRFLQ96LU7 910 aa11.51□□□□□ -0.57
SGMS1-206ENST00000602565 KCNF1Q9H3M0 494 aa11.51□□□□□ -0.57
SGMS1-206ENST00000602565 REV1Q9UBZ9 1251 aa11.51□□□□□ -0.57
SGMS1-206ENST00000602565 DAGLAQ9Y4D2 1042 aa11.51□□□□□ -0.57
SGMS1-206ENST00000602565 PRR36Q9H6K5 1346 aa11.5□□□□□ -0.57
SGMS1-206ENST00000602565 NEFMP07197 916 aa11.5□□□□□ -0.57
SGMS1-206ENST00000602565 FGRP09769 529 aa11.5□□□□□ -0.57
SGMS1-206ENST00000602565 SGO2Q562F6 1265 aa11.5□□□□□ -0.57
SGMS1-206ENST00000602565 TMEM151AQ8N4L1 468 aa11.5□□□□□ -0.57
SGMS1-206ENST00000602565 FBLIM1Q8WUP2 373 aa11.5□□□□□ -0.57
SGMS1-206ENST00000602565 ISL2Q96A47 359 aa11.5□□□□□ -0.57
SGMS1-206ENST00000602565 SRRTQ9BXP5 876 aaKnown RBP11.5□□□□□ -0.57
SGMS1-206ENST00000602565 EHMT1Q9H9B1 1298 aa11.5□□□□□ -0.57
SGMS1-206ENST00000602565 ADAM30Q9UKF2 790 aa11.5□□□□□ -0.57
SGMS1-206ENST00000602565 DHX15O43143 795 aaKnown RBP11.49□□□□□ -0.57
SGMS1-206ENST00000602565 ATE1O95260 518 aa11.49□□□□□ -0.57
SGMS1-206ENST00000602565 CDPF1Q6NVV7 123 aa11.49□□□□□ -0.57
SGMS1-206ENST00000602565 MCF2L2Q86YR7 1114 aa11.49□□□□□ -0.57
SGMS1-206ENST00000602565 HID1Q8IV36 788 aa11.49□□□□□ -0.57
SGMS1-206ENST00000602565 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.49□□□□□ -0.57
SGMS1-206ENST00000602565 KLHL3Q9UH77 587 aa11.49□□□□□ -0.57
SGMS1-206ENST00000602565 PCOLCE2Q9UKZ9 415 aa11.49□□□□□ -0.57
SGMS1-206ENST00000602565 ZNRF3Q9ULT6 936 aa11.49□□□□□ -0.57
SGMS1-206ENST00000602565 MAP4P27816 1152 aaKnown RBP11.48□□□□□ -0.57
SGMS1-206ENST00000602565 MAP7Q14244 749 aa11.48□□□□□ -0.57
SGMS1-206ENST00000602565 ARMC10Q8N2F6 343 aa11.48□□□□□ -0.57
SGMS1-206ENST00000602565 TP53INP1Q96A56 240 aa11.48□□□□□ -0.57
SGMS1-206ENST00000602565 ACSS3Q9H6R3 686 aa11.48□□□□□ -0.57
SGMS1-206ENST00000602565 NFICP08651 508 aa11.47□□□□□ -0.57
SGMS1-206ENST00000602565 NTF4P34130 210 aa11.47□□□□□ -0.57
SGMS1-206ENST00000602565 EIF6P56537 245 aaKnown RBP11.47□□□□□ -0.57
SGMS1-206ENST00000602565 LRRFIP1Q32MZ4 808 aaKnown RBP11.47□□□□□ -0.57
SGMS1-206ENST00000602565 PLA2G4EQ3MJ16 856 aa11.47□□□□□ -0.57
SGMS1-206ENST00000602565 FAM20CQ8IXL6 584 aa11.47□□□□□ -0.57
SGMS1-206ENST00000602565 GSK3AP49840 483 aa11.46□□□□□ -0.57
SGMS1-206ENST00000602565 FAM13CQ8NE31 585 aa11.46□□□□□ -0.57
SGMS1-206ENST00000602565 ANAPC16Q96DE5 110 aa11.46□□□□□ -0.57
SGMS1-206ENST00000602565 SEMA6CQ9H3T2 930 aa11.46□□□□□ -0.57
SGMS1-206ENST00000602565 LGR6Q9HBX8 967 aa11.46□□□□□ -0.57
SGMS1-206ENST00000602565 FAM95CA0A1B0GW59 222 aa11.45□□□□□ -0.58
SGMS1-206ENST00000602565 GTF2F1P35269 517 aaKnown RBP eCLIP11.45□□□□□ -0.58
SGMS1-206ENST00000602565 YARSP54577 528 aaKnown RBP11.45□□□□□ -0.58
SGMS1-206ENST00000602565 NFKBIBQ15653 356 aa11.45□□□□□ -0.58
SGMS1-206ENST00000602565 TMEM201Q5SNT2 666 aa11.45□□□□□ -0.58
SGMS1-206ENST00000602565 ACSF2Q96CM8 615 aaPredicted RBP11.45□□□□□ -0.58
SGMS1-206ENST00000602565 FBRSQ9HAH7 460 aa11.45□□□□□ -0.58
SGMS1-206ENST00000602565 GMIPQ9P107 970 aa11.45□□□□□ -0.58
SGMS1-206ENST00000602565 STK10O94804 968 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms