RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 NOL9Q5SY16 702 aaKnown RBP6.4□□□□□ -1.38
VRK3-226ENST00000602029 GPAT2Q6NUI2 795 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 PRRT2Q7Z6L0 340 aaPredicted RBP6.4□□□□□ -1.38
VRK3-226ENST00000602029 SSH1Q8WYL5 1049 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.4□□□□□ -1.38
VRK3-226ENST00000602029 USP44Q9H0E7 712 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 BCL11AQ9H165 835 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 TMOD4Q9NZQ9 345 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 LRP2BPQ9P2M1 347 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 AKAP2Q9Y2D5 859 aa6.4□□□□□ -1.38
VRK3-226ENST00000602029 UTYO14607 1347 aa6.4□□□□□ -1.39
VRK3-226ENST00000602029 KIF16BQ96L93 1317 aa6.4□□□□□ -1.39
VRK3-226ENST00000602029 A0A1B0GUL6 1792 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 A0A1W2PPC1 479 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 DDTLA6NHG4 134 aaPredicted RBP6.39□□□□□ -1.39
VRK3-226ENST00000602029 SEMA3EO15041 775 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 CIAO1O76071 339 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 HMGCRP04035 888 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 MYCNP04198 464 aaPredicted RBP6.39□□□□□ -1.39
VRK3-226ENST00000602029 LDHCP07864 332 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 SLURP2P0DP57 97 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 BCRP11274 1271 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 CYP2B6P20813 491 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 FGFR2P21802 821 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 RASGRF1Q13972 1273 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 TREML2Q5T2D2 321 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 CCDC102BQ68D86 513 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 TEX11Q8IYF3 940 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 GUCD1Q96NT3 240 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 FEZ1Q99689 392 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 PAGR1Q9BTK6 254 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 AS3MTQ9HBK9 375 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 HMX1Q9NP08 348 aaPredicted RBP6.39□□□□□ -1.39
VRK3-226ENST00000602029 ZNF112Q9UJU3 913 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 AGTPBP1Q9UPW5 1226 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 MROH7-TTC4A0A0A0MT08 1334 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 ADGRA2Q96PE1 1338 aa6.39□□□□□ -1.39
VRK3-226ENST00000602029 A0A1B0GUL7 405 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 USP17L5A8MUK1 530 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 SRGAP3O43295 1099 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 GCLCP48506 637 aaPredicted RBP6.38□□□□□ -1.39
VRK3-226ENST00000602029 TIMM10P62072 90 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 HNRNPUQ00839 825 aaKnown RBP eCLIP6.38□□□□□ -1.39
VRK3-226ENST00000602029 MECOMQ03112 1051 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 TFCP2Q12800 502 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 TTC39AQ5SRH9 613 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 ATG9AQ7Z3C6 839 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 ZNF280CQ8ND82 737 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 PXYLP1Q8TE99 480 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 DIS3LQ8TF46 1054 aaKnown RBP6.38□□□□□ -1.39
VRK3-226ENST00000602029 XAGE2Q96GT9 111 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 API5Q9BZZ5 524 aaKnown RBP6.38□□□□□ -1.39
VRK3-226ENST00000602029 UBE2OQ9C0C9 1292 aaKnown RBP6.38□□□□□ -1.39
VRK3-226ENST00000602029 NBPF3Q9H094 633 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 DDX4Q9NQI0 724 aaKnown RBP6.38□□□□□ -1.39
VRK3-226ENST00000602029 NOB1Q9ULX3 412 aaKnown RBP6.38□□□□□ -1.39
VRK3-226ENST00000602029 AFG3L2Q9Y4W6 797 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 MYO9BQ13459 2157 aa6.38□□□□□ -1.39
VRK3-226ENST00000602029 AK9Q5TCS8 1911 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 SALL1Q9NSC2 1324 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 PHF20L1A8MW92 1017 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 BAG3O95817 575 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 HLA-DOAP06340 250 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 GNAI3P08754 354 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 PRKAR2AP13861 404 aaKnown RBP6.37□□□□□ -1.39
VRK3-226ENST00000602029 ZKSCAN1P17029 563 aaPredicted RBP6.37□□□□□ -1.39
VRK3-226ENST00000602029 CNGA1P29973 690 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 RFX5P48382 616 aaPredicted RBP6.37□□□□□ -1.39
VRK3-226ENST00000602029 G3BP1Q13283 466 aaKnown RBP eCLIP6.37□□□□□ -1.39
VRK3-226ENST00000602029 IRF5Q13568 498 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 MTMR2Q13614 643 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 MOGSQ13724 837 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 ZYXQ15942 572 aaKnown RBP6.37□□□□□ -1.39
VRK3-226ENST00000602029 FAM110CQ1W6H9 321 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 SAMD1Q6SPF0 538 aaPredicted RBP6.37□□□□□ -1.39
VRK3-226ENST00000602029 TBC1D9Q6ZT07 1266 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 SPATA5Q8NB90 893 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 PROCA1Q8NCQ7 364 aaPredicted RBP6.37□□□□□ -1.39
VRK3-226ENST00000602029 FRAT1Q92837 279 aaPredicted RBP6.37□□□□□ -1.39
VRK3-226ENST00000602029 LBHD1Q9BQE6 289 aaPredicted RBP6.37□□□□□ -1.39
VRK3-226ENST00000602029 NUDT12Q9BQG2 462 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 IDI2Q9BXS1 227 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 OSBPL5Q9H0X9 879 aaPredicted RBP6.37□□□□□ -1.39
VRK3-226ENST00000602029 ASCC2Q9H1I8 757 aaPredicted RBP6.37□□□□□ -1.39
VRK3-226ENST00000602029 C11orf49Q9H6J7 331 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 SNRKQ9NRH2 765 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 AATFQ9NY61 560 aaKnown RBP eCLIP6.37□□□□□ -1.39
VRK3-226ENST00000602029 PRKAG2Q9UGJ0 569 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 SAP30BPQ9UHR5 308 aaKnown RBP6.37□□□□□ -1.39
VRK3-226ENST00000602029 FBXO3Q9UK99 471 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 SLC45A1Q9Y2W3 748 aa6.37□□□□□ -1.39
VRK3-226ENST00000602029 TCF20Q9UGU0 1960 aaKnown RBP6.37□□□□□ -1.39
VRK3-226ENST00000602029 GAKO14976 1311 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 RPTORQ8N122 1335 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 GDF11O95390 407 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 PLCG2P16885 1265 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 MAGEA10P43363 369 aaPredicted RBP6.36□□□□□ -1.39
VRK3-226ENST00000602029 MDM2Q00987 491 aaPredicted RBP6.36□□□□□ -1.39
VRK3-226ENST00000602029 TRIM32Q13049 653 aa6.36□□□□□ -1.39
VRK3-226ENST00000602029 ALDH1L2Q3SY69 923 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms