RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CACNB3P54284 484 aa26.63■■□□□ 1.85
IRF3-228ENST00000601291 ANTXR2P58335 489 aa26.63■■□□□ 1.85
IRF3-228ENST00000601291 FBXL16Q8N461 479 aa26.63■■□□□ 1.85
IRF3-228ENST00000601291 LRRC2Q9BYS8 371 aa26.63■■□□□ 1.85
IRF3-228ENST00000601291 CNOT7Q9UIV1 285 aaKnown RBP26.63■■□□□ 1.85
IRF3-228ENST00000601291 ENTPD3O75355 529 aa26.62■■□□□ 1.85
IRF3-228ENST00000601291 EVX2Q03828 476 aa26.62■■□□□ 1.85
IRF3-228ENST00000601291 SPDYE2Q495Y8 402 aa26.62■■□□□ 1.85
IRF3-228ENST00000601291 CYB5R4Q7L1T6 521 aa26.62■■□□□ 1.85
IRF3-228ENST00000601291 BRF1Q92994 677 aa26.62■■□□□ 1.85
IRF3-228ENST00000601291 ZBED3Q96IU2 234 aaPredicted RBP26.62■■□□□ 1.85
IRF3-228ENST00000601291 TMEM87BQ96K49 555 aa26.62■■□□□ 1.85
IRF3-228ENST00000601291 AGXT2Q9BYV1 514 aa26.62■■□□□ 1.85
IRF3-228ENST00000601291 DHX36Q9H2U1 1008 aaKnown RBP26.62■■□□□ 1.85
IRF3-228ENST00000601291 SH2B1Q9NRF2 756 aaPredicted RBP26.62■■□□□ 1.85
IRF3-228ENST00000601291 ZNF70Q9UC06 446 aaPredicted RBP26.62■■□□□ 1.85
IRF3-228ENST00000601291 SART3Q15020 963 aaKnown RBP26.61■■□□□ 1.85
IRF3-228ENST00000601291 ZSWIM5Q9P217 1185 aa26.61■■□□□ 1.85
IRF3-228ENST00000601291 FAM198AQ9UFP1 575 aa26.61■■□□□ 1.85
IRF3-228ENST00000601291 H7C1D1 291 aa26.6■■□□□ 1.85
IRF3-228ENST00000601291 RANBP6O60518 1105 aaKnown RBP26.6■■□□□ 1.85
IRF3-228ENST00000601291 PRDM1O75626 825 aa26.6■■□□□ 1.85
IRF3-228ENST00000601291 C16orf86Q6ZW13 317 aa26.6■■□□□ 1.85
IRF3-228ENST00000601291 MTA3Q9BTC8 594 aa26.6■■□□□ 1.85
IRF3-228ENST00000601291 MKNK2Q9HBH9 465 aa26.6■■□□□ 1.85
IRF3-228ENST00000601291 COL2A1P02458 1487 aaPredicted RBP26.6■■□□□ 1.85
IRF3-228ENST00000601291 SHTN1A0MZ66 631 aa26.59■■□□□ 1.85
IRF3-228ENST00000601291 CLRN2A0PK11 232 aa26.59■■□□□ 1.85
IRF3-228ENST00000601291 WNT10BO00744 389 aa26.59■■□□□ 1.85
IRF3-228ENST00000601291 TCP10Q12799 353 aa26.59■■□□□ 1.85
IRF3-228ENST00000601291 DYNLL2Q96FJ2 89 aa26.59■■□□□ 1.85
IRF3-228ENST00000601291 LARP6Q9BRS8 491 aaKnown RBP26.59■■□□□ 1.85
IRF3-228ENST00000601291 ERICH2A1L162 156 aa26.58■■□□□ 1.85
IRF3-228ENST00000601291 FKBP1CQ5VVH2 108 aa26.58■■□□□ 1.85
IRF3-228ENST00000601291 UBAC1Q9BSL1 405 aa26.58■■□□□ 1.85
IRF3-228ENST00000601291 TPCN1Q9ULQ1 816 aa26.58■■□□□ 1.85
IRF3-228ENST00000601291 ANGEL1Q9UNK9 670 aaKnown RBP26.58■■□□□ 1.85
IRF3-228ENST00000601291 RBM26Q5T8P6 1007 aaKnown RBP26.58■■□□□ 1.85
IRF3-228ENST00000601291 ZSCAN29Q8IWY8 852 aaPredicted RBP26.58■■□□□ 1.85
IRF3-228ENST00000601291 SPRYD3Q8NCJ5 442 aa26.58■■□□□ 1.85
IRF3-228ENST00000601291 VEZTQ9HBM0 779 aa26.58■■□□□ 1.85
IRF3-228ENST00000601291 GPRC5DQ9NZD1 345 aa26.58■■□□□ 1.85
IRF3-228ENST00000601291 ZC3H4Q9UPT8 1303 aaKnown RBP26.57■■□□□ 1.84
IRF3-228ENST00000601291 SH2B2O14492 632 aaPredicted RBP26.57■■□□□ 1.84
IRF3-228ENST00000601291 IFIT3O14879 490 aaKnown RBP26.57■■□□□ 1.84
IRF3-228ENST00000601291 KIF4BQ2VIQ3 1234 aa26.57■■□□□ 1.84
IRF3-228ENST00000601291 NBPF9Q3BBW0 867 aa26.57■■□□□ 1.84
IRF3-228ENST00000601291 TMEM67Q5HYA8 995 aa26.57■■□□□ 1.84
IRF3-228ENST00000601291 IQCA1Q86XH1 822 aa26.57■■□□□ 1.84
IRF3-228ENST00000601291 NKX2-3Q8TAU0 364 aa26.57■■□□□ 1.84
IRF3-228ENST00000601291 EHD4Q9H223 541 aa26.57■■□□□ 1.84
IRF3-228ENST00000601291 SERPINB13Q9UIV8 391 aa26.57■■□□□ 1.84
IRF3-228ENST00000601291 TAOK2Q9UL54 1235 aa26.57■■□□□ 1.84
IRF3-228ENST00000601291 TSPY2A6NKD2 308 aa26.56■■□□□ 1.84
IRF3-228ENST00000601291 TCP10L2B9ZVM9 353 aa26.56■■□□□ 1.84
IRF3-228ENST00000601291 CDK8P49336 464 aa26.56■■□□□ 1.84
IRF3-228ENST00000601291 CUL4AQ13619 759 aa26.56■■□□□ 1.84
IRF3-228ENST00000601291 ZNF444Q8N0Y2 327 aaPredicted RBP26.56■■□□□ 1.84
IRF3-228ENST00000601291 SWAP70Q9UH65 585 aa26.56■■□□□ 1.84
IRF3-228ENST00000601291 ATRNL1Q5VV63 1379 aa26.56■■□□□ 1.84
IRF3-228ENST00000601291 APOBRQ0VD83 1088 aa26.55■■□□□ 1.84
IRF3-228ENST00000601291 ME3Q16798 604 aa26.55■■□□□ 1.84
IRF3-228ENST00000601291 SAMD7Q7Z3H4 446 aa26.55■■□□□ 1.84
IRF3-228ENST00000601291 ZFPM1Q8IX07 1006 aa26.55■■□□□ 1.84
IRF3-228ENST00000601291 PI4KBQ9UBF8 816 aa26.55■■□□□ 1.84
IRF3-228ENST00000601291 DDNO94850 711 aaPredicted RBP26.54■■□□□ 1.84
IRF3-228ENST00000601291 LMOD1P29536 600 aaPredicted RBP26.54■■□□□ 1.84
IRF3-228ENST00000601291 TNNI2P48788 182 aa26.54■■□□□ 1.84
IRF3-228ENST00000601291 TBC1D10BQ4KMP7 808 aaPredicted RBP26.54■■□□□ 1.84
IRF3-228ENST00000601291 DPY19L2Q6NUT2 758 aa26.54■■□□□ 1.84
IRF3-228ENST00000601291 SLC44A5Q8NCS7 719 aa26.54■■□□□ 1.84
IRF3-228ENST00000601291 IGDCC4Q8TDY8 1250 aa26.54■■□□□ 1.84
IRF3-228ENST00000601291 FAM151AQ8WW52 585 aa26.54■■□□□ 1.84
IRF3-228ENST00000601291 TRIM34Q9BYJ4 488 aa26.54■■□□□ 1.84
IRF3-228ENST00000601291 LARGE1O95461 756 aa26.54■■□□□ 1.84
IRF3-228ENST00000601291 LIFRP42702 1097 aa26.54■■□□□ 1.84
IRF3-228ENST00000601291 GABPAQ06546 454 aa26.54■■□□□ 1.84
IRF3-228ENST00000601291 TNFAIP1Q13829 316 aa26.54■■□□□ 1.84
IRF3-228ENST00000601291 FAM83AQ86UY5 434 aa26.54■■□□□ 1.84
IRF3-228ENST00000601291 CRACR2BQ8N4Y2 399 aaPredicted RBP26.54■■□□□ 1.84
IRF3-228ENST00000601291 INTS4Q96HW7 963 aaKnown RBP26.54■■□□□ 1.84
IRF3-228ENST00000601291 ZSCAN10Q96SZ4 725 aaPredicted RBP26.54■■□□□ 1.84
IRF3-228ENST00000601291 DDTLA6NHG4 134 aaPredicted RBP26.53■■□□□ 1.84
IRF3-228ENST00000601291 EGFRP00533 1210 aa26.53■■□□□ 1.84
IRF3-228ENST00000601291 EVCP57679 992 aa26.53■■□□□ 1.84
IRF3-228ENST00000601291 WTAPQ15007 396 aa26.53■■□□□ 1.84
IRF3-228ENST00000601291 TMTC2Q8N394 836 aa26.53■■□□□ 1.84
IRF3-228ENST00000601291 ZNF274Q96GC6 653 aaPredicted RBP26.53■■□□□ 1.84
IRF3-228ENST00000601291 ZKSCAN3Q9BRR0 538 aa26.53■■□□□ 1.84
IRF3-228ENST00000601291 LY9Q9HBG7 655 aa26.53■■□□□ 1.84
IRF3-228ENST00000601291 GPHNQ9NQX3 736 aaPredicted RBP26.53■■□□□ 1.84
IRF3-228ENST00000601291 FOXD4L1Q9NU39 408 aa26.53■■□□□ 1.84
IRF3-228ENST00000601291 NAP1L2Q9ULW6 460 aaPredicted RBP26.53■■□□□ 1.84
IRF3-228ENST00000601291 TNKSO95271 1327 aa26.52■■□□□ 1.84
IRF3-228ENST00000601291 TSPY3P0CV98 308 aa26.52■■□□□ 1.84
IRF3-228ENST00000601291 TSPY8P0CW00 308 aa26.52■■□□□ 1.84
IRF3-228ENST00000601291 RASA1P20936 1047 aa26.52■■□□□ 1.84
IRF3-228ENST00000601291 FAM47AQ5JRC9 791 aa26.52■■□□□ 1.84
IRF3-228ENST00000601291 NFXL1Q6ZNB6 911 aa26.52■■□□□ 1.84
IRF3-228ENST00000601291 SH3BP5LQ7L8J4 393 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms