RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 WDHD1O75717 1129 aaPredicted RBP17.82■□□□□ 0.44
VRK3-218ENST00000600031 PLCD1P51178 756 aa17.82■□□□□ 0.44
VRK3-218ENST00000600031 PRELPP51888 382 aa17.82■□□□□ 0.44
VRK3-218ENST00000600031 EVCP57679 992 aa17.82■□□□□ 0.44
VRK3-218ENST00000600031 GMLQ99445 158 aa17.82■□□□□ 0.44
VRK3-218ENST00000600031 SERPINA10Q9UK55 444 aa17.82■□□□□ 0.44
VRK3-218ENST00000600031 ZBTB12Q9Y330 459 aaPredicted RBP17.82■□□□□ 0.44
VRK3-218ENST00000600031 FOCADQ5VW36 1801 aa17.82■□□□□ 0.44
VRK3-218ENST00000600031 LTBP3Q9NS15 1303 aa17.82■□□□□ 0.44
VRK3-218ENST00000600031 PCP11498 1178 aaKnown RBP17.81■□□□□ 0.44
VRK3-218ENST00000600031 PDIA3P30101 505 aaKnown RBP17.81■□□□□ 0.44
VRK3-218ENST00000600031 RBM5P52756 815 aaKnown RBP eCLIP17.81■□□□□ 0.44
VRK3-218ENST00000600031 CXCL9Q07325 125 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 PKP1Q13835 747 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 GTF3C6Q969F1 213 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 TMEM87BQ96K49 555 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 SENP2Q9HC62 589 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 DDX4Q9NQI0 724 aaKnown RBP17.81■□□□□ 0.44
VRK3-218ENST00000600031 ANGEL1Q9UNK9 670 aaKnown RBP17.81■□□□□ 0.44
VRK3-218ENST00000600031 DDX60LQ5H9U9 1706 aaKnown RBP17.81■□□□□ 0.44
VRK3-218ENST00000600031 SRCAPQ6ZRS2 3230 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 PFKFB2O60825 505 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 POLR3DP05423 398 aaPredicted RBP17.81■□□□□ 0.44
VRK3-218ENST00000600031 SCRN1Q12765 414 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 PICALMQ13492 652 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 JDP2Q8WYK2 163 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 ESR2Q92731 530 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 DYNLL2Q96FJ2 89 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 ZNF274Q96GC6 653 aaPredicted RBP17.81■□□□□ 0.44
VRK3-218ENST00000600031 ZKSCAN3Q9BRR0 538 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 NAP1L2Q9ULW6 460 aaPredicted RBP17.81■□□□□ 0.44
VRK3-218ENST00000600031 MYO3BQ8WXR4 1341 aa17.81■□□□□ 0.44
VRK3-218ENST00000600031 SLC3A2P08195 630 aaKnown RBP17.8■□□□□ 0.44
VRK3-218ENST00000600031 TMEM67Q5HYA8 995 aa17.8■□□□□ 0.44
VRK3-218ENST00000600031 LY9Q9HBG7 655 aa17.8■□□□□ 0.44
VRK3-218ENST00000600031 MYH1P12882 1939 aa17.8■□□□□ 0.44
VRK3-218ENST00000600031 KLF18A0A0U1RQI7 1052 aa17.8■□□□□ 0.44
VRK3-218ENST00000600031 IFIT3O14879 490 aaKnown RBP17.8■□□□□ 0.44
VRK3-218ENST00000600031 ORC4O43929 436 aa17.8■□□□□ 0.44
VRK3-218ENST00000600031 RANBP6O60518 1105 aaKnown RBP17.8■□□□□ 0.44
VRK3-218ENST00000600031 CCT2P78371 535 aaKnown RBP17.8■□□□□ 0.44
VRK3-218ENST00000600031 CFAP100Q494V2 611 aa17.8■□□□□ 0.44
VRK3-218ENST00000600031 AMOTL1Q8IY63 956 aa17.8■□□□□ 0.44
VRK3-218ENST00000600031 SMC3Q9UQE7 1217 aa17.8■□□□□ 0.44
VRK3-218ENST00000600031 ROBO3Q96MS0 1386 aa17.79■□□□□ 0.44
VRK3-218ENST00000600031 PDE4BQ07343 736 aa17.79■□□□□ 0.44
VRK3-218ENST00000600031 NFIAQ12857 509 aa17.79■□□□□ 0.44
VRK3-218ENST00000600031 MCTP1Q6DN14 999 aa17.79■□□□□ 0.44
VRK3-218ENST00000600031 TRIM44Q96DX7 344 aaPredicted RBP17.79■□□□□ 0.44
VRK3-218ENST00000600031 ECM29Q5VYK3 1845 aa17.79■□□□□ 0.44
VRK3-218ENST00000600031 GJB2P29033 226 aa17.78■□□□□ 0.44
VRK3-218ENST00000600031 LIFRP42702 1097 aa17.78■□□□□ 0.44
VRK3-218ENST00000600031 CACNB3P54284 484 aa17.78■□□□□ 0.44
VRK3-218ENST00000600031 ZNF445P59923 1031 aa17.78■□□□□ 0.44
VRK3-218ENST00000600031 CIAPIN1Q6FI81 312 aa17.78■□□□□ 0.44
VRK3-218ENST00000600031 RAB11FIP4Q86YS3 637 aa17.78■□□□□ 0.44
VRK3-218ENST00000600031 SLC44A5Q8NCS7 719 aa17.78■□□□□ 0.44
VRK3-218ENST00000600031 PRMT6Q96LA8 375 aaPredicted RBP17.78■□□□□ 0.44
VRK3-218ENST00000600031 SYT17Q9BSW7 474 aa17.78■□□□□ 0.44
VRK3-218ENST00000600031 NCOA5Q9HCD5 579 aaKnown RBP17.78■□□□□ 0.44
VRK3-218ENST00000600031 HPS5Q9UPZ3 1129 aa17.78■□□□□ 0.44
VRK3-218ENST00000600031 CCDC173Q0VFZ6 552 aa17.77■□□□□ 0.44
VRK3-218ENST00000600031 FAM47AQ5JRC9 791 aa17.77■□□□□ 0.44
VRK3-218ENST00000600031 SGMS1Q86VZ5 419 aa17.77■□□□□ 0.44
VRK3-218ENST00000600031 MTA3Q9BTC8 594 aa17.77■□□□□ 0.44
VRK3-218ENST00000600031 LMBRD1Q9NUN5 540 aa17.77■□□□□ 0.44
VRK3-218ENST00000600031 ZDHHC9Q9Y397 364 aa17.77■□□□□ 0.44
VRK3-218ENST00000600031 GOLGA8BA8MQT2 603 aa17.77■□□□□ 0.43
VRK3-218ENST00000600031 ESPNB1AK53 854 aa17.77■□□□□ 0.43
VRK3-218ENST00000600031 SART3Q15020 963 aaKnown RBP17.77■□□□□ 0.43
VRK3-218ENST00000600031 AGBL3Q8NEM8 1001 aa17.77■□□□□ 0.43
VRK3-218ENST00000600031 UBAC1Q9BSL1 405 aa17.77■□□□□ 0.43
VRK3-218ENST00000600031 OSBPL5Q9H0X9 879 aaPredicted RBP17.77■□□□□ 0.43
VRK3-218ENST00000600031 TDRD3Q9H7E2 651 aaKnown RBP17.77■□□□□ 0.43
VRK3-218ENST00000600031 JAK2O60674 1132 aa17.76■□□□□ 0.43
VRK3-218ENST00000600031 WTAPQ15007 396 aa17.76■□□□□ 0.43
VRK3-218ENST00000600031 SEC23AQ15436 765 aa17.76■□□□□ 0.43
VRK3-218ENST00000600031 NFXL1Q6ZNB6 911 aa17.76■□□□□ 0.43
VRK3-218ENST00000600031 ZFPM1Q8IX07 1006 aa17.76■□□□□ 0.43
VRK3-218ENST00000600031 HDAC9Q9UKV0 1011 aa17.76■□□□□ 0.43
VRK3-218ENST00000600031 TNKSO95271 1327 aa17.76■□□□□ 0.43
VRK3-218ENST00000600031 CTDNEP1O95476 244 aa17.75■□□□□ 0.43
VRK3-218ENST00000600031 APOA5Q6Q788 366 aa17.75■□□□□ 0.43
VRK3-218ENST00000600031 ARHGAP27Q6ZUM4 889 aa17.75■□□□□ 0.43
VRK3-218ENST00000600031 C16orf86Q6ZW13 317 aa17.75■□□□□ 0.43
VRK3-218ENST00000600031 OGFOD1Q8N543 542 aa17.75■□□□□ 0.43
VRK3-218ENST00000600031 ANP32BQ92688 251 aaKnown RBP17.75■□□□□ 0.43
VRK3-218ENST00000600031 ZSCAN10Q96SZ4 725 aaPredicted RBP17.75■□□□□ 0.43
VRK3-218ENST00000600031 IDI2Q9BXS1 227 aa17.75■□□□□ 0.43
VRK3-218ENST00000600031 MKNK2Q9HBH9 465 aa17.75■□□□□ 0.43
VRK3-218ENST00000600031 FAM198AQ9UFP1 575 aa17.75■□□□□ 0.43
VRK3-218ENST00000600031 ERICH2A1L162 156 aa17.75■□□□□ 0.43
VRK3-218ENST00000600031 CDK8P49336 464 aa17.75■□□□□ 0.43
VRK3-218ENST00000600031 TNIP1Q15025 636 aa17.75■□□□□ 0.43
VRK3-218ENST00000600031 ENAHQ8N8S7 591 aaPredicted RBP17.75■□□□□ 0.43
VRK3-218ENST00000600031 PPP1R9BQ96SB3 815 aa17.75■□□□□ 0.43
VRK3-218ENST00000600031 SPDYE2BA6NHP3 402 aa17.74■□□□□ 0.43
VRK3-218ENST00000600031 FZD9O00144 591 aa17.74■□□□□ 0.43
VRK3-218ENST00000600031 NMT2O60551 498 aa17.74■□□□□ 0.43
VRK3-218ENST00000600031 SPDYE6P0CI01 402 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms