RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
SCN8A-208ENST00000599343 MGARPQ8TDB4 240 aa13.19□□□□□ -0.3
SCN8A-208ENST00000599343 V9GY48 417 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-208ENST00000599343 VAMP4O75379 141 aa13.18□□□□□ -0.3
SCN8A-208ENST00000599343 SATB1Q01826 763 aa13.18□□□□□ -0.3
SCN8A-208ENST00000599343 TRPC3Q13507 836 aa13.18□□□□□ -0.3
SCN8A-208ENST00000599343 NAP1L4Q99733 375 aaKnown RBP13.18□□□□□ -0.3
SCN8A-208ENST00000599343 NUF2Q9BZD4 464 aa13.18□□□□□ -0.3
SCN8A-208ENST00000599343 SARNPP82979 210 aaKnown RBP13.18□□□□□ -0.3
SCN8A-208ENST00000599343 DYMQ7RTS9 669 aa13.18□□□□□ -0.3
SCN8A-208ENST00000599343 OTUD7AQ8TE49 926 aaPredicted RBP13.18□□□□□ -0.3
SCN8A-208ENST00000599343 GDAP1L1Q96MZ0 367 aa13.18□□□□□ -0.3
SCN8A-208ENST00000599343 DDX21Q9NR30 783 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCN8A-208ENST00000599343 ZBTB40Q9NUA8 1239 aa13.18□□□□□ -0.3
SCN8A-208ENST00000599343 CEP128Q6ZU80 1094 aa13.18□□□□□ -0.3
SCN8A-208ENST00000599343 SMTNP53814 917 aa13.18□□□□□ -0.3
SCN8A-208ENST00000599343 MTX1Q13505 466 aa13.18□□□□□ -0.3
SCN8A-208ENST00000599343 RAD51AP2Q09MP3 1159 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 TAOK1Q7L7X3 1001 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 SLF1Q9BQI6 1058 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 GADD45BO75293 160 aaPredicted RBP13.17□□□□□ -0.3
SCN8A-208ENST00000599343 NLRP12P59046 1061 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 TEX11Q8IYF3 940 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 TBC1D31Q96DN5 1066 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 MYL10Q9BUA6 226 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 ARID4AP29374 1257 aaPredicted RBP13.17□□□□□ -0.3
SCN8A-208ENST00000599343 PPP1R2P41236 205 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 TSNAXIP1Q2TAA8 658 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 SND1Q7KZF4 910 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCN8A-208ENST00000599343 GBP7Q8N8V2 638 aaPredicted RBP13.17□□□□□ -0.3
SCN8A-208ENST00000599343 SNX14Q9Y5W7 946 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 RPRD2Q5VT52 1461 aaKnown RBP13.17□□□□□ -0.3
SCN8A-208ENST00000599343 TIMM10P62072 90 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 GABPAQ06546 454 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 SLC9C1Q4G0N8 1177 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 TPTE2Q6XPS3 522 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 CABS1Q96KC9 395 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 MYO1AQ9UBC5 1043 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 CETN3O15182 167 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 PDE1CQ14123 709 aaPredicted RBP13.17□□□□□ -0.3
SCN8A-208ENST00000599343 TTC38Q5R3I4 469 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 NELFCDQ8IXH7 590 aa13.17□□□□□ -0.3
SCN8A-208ENST00000599343 CABLES1Q8TDN4 633 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 KIAA0586Q9BVV6 1533 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 SLC8A3P57103 927 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 STRN3Q13033 797 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 TUBB2AQ13885 445 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 CASC4Q6P4E1 433 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 TRMT44Q8IYL2 757 aaKnown RBP13.16□□□□□ -0.3
SCN8A-208ENST00000599343 TUBB2BQ9BVA1 445 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.16□□□□□ -0.3
SCN8A-208ENST00000599343 PRDM1O75626 825 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 KRT15P19012 456 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 MAGEA1P43355 309 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 CCDC105Q8IYK2 499 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 ANKRD2Q9GZV1 360 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 BLZF1Q9H2G9 400 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 STK38LQ9Y2H1 464 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 STK10O94804 968 aaKnown RBP13.16□□□□□ -0.3
SCN8A-208ENST00000599343 ZNF202O95125 648 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 ZYXQ15942 572 aaKnown RBP13.16□□□□□ -0.3
SCN8A-208ENST00000599343 ANKRD42Q8N9B4 389 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 TRIM6Q9C030 488 aaPredicted RBP13.16□□□□□ -0.3
SCN8A-208ENST00000599343 I3L4J1 428 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 MYCLP12524 364 aaPredicted RBP13.16□□□□□ -0.3
SCN8A-208ENST00000599343 CTDSPL2Q05D32 466 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 RUFY4Q6ZNE9 571 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 DIS3L2Q8IYB7 885 aaKnown RBP13.16□□□□□ -0.3
SCN8A-208ENST00000599343 NELFBQ8WX92 580 aa13.16□□□□□ -0.3
SCN8A-208ENST00000599343 ARHGEF35A5YM69 484 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 CUTAO60888 179 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 MAN1A1P33908 653 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 STAMQ92783 540 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 FAM227BQ96M60 508 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 GINS2Q9Y248 185 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 AFG3L2Q9Y4W6 797 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 PAK2Q13177 524 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 HAUS3Q68CZ6 603 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 KLHDC4Q8TBB5 520 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 PHKBQ93100 1093 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 NUP58Q9BVL2 599 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 POLKQ9UBT6 870 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 PLB1Q6P1J6 1458 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 TBC1D8O95759 1140 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 TTC6Q86TZ1 520 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 MYRIPQ8NFW9 859 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 TACO1Q9BSH4 297 aaKnown RBP13.15□□□□□ -0.3
SCN8A-208ENST00000599343 MAP3K5Q99683 1374 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 DCUN1D2Q6PH85 259 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 SNX29Q8TEQ0 813 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 VPS37BQ9H9H4 285 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 DENND2AQ9ULE3 1009 aa13.15□□□□□ -0.3
SCN8A-208ENST00000599343 GIPC1O14908 333 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 TYW1BQ6NUM6 668 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 AFAP1L2Q8N4X5 818 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 TTLL3Q9Y4R7 772 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 KLHL30Q0D2K2 578 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 DDB1Q16531 1140 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 TMEM87BQ96K49 555 aa13.14□□□□□ -0.31
SCN8A-208ENST00000599343 NFE2L3Q9Y4A8 694 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms