RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 PLXNB2O15031 1838 aa18.07■□□□□ 0.48
IRF3-223ENST00000599223 CCL5P13501 91 aa18.07■□□□□ 0.48
IRF3-223ENST00000599223 GSTO1P78417 241 aa18.07■□□□□ 0.48
IRF3-223ENST00000599223 G3BP1Q13283 466 aaKnown RBP eCLIP18.07■□□□□ 0.48
IRF3-223ENST00000599223 TNNI3KQ59H18 835 aa18.07■□□□□ 0.48
IRF3-223ENST00000599223 UBE2Q1Q7Z7E8 422 aa18.07■□□□□ 0.48
IRF3-223ENST00000599223 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.07■□□□□ 0.48
IRF3-223ENST00000599223 FPGT-TNNI3KV9GXZ4 949 aa18.07■□□□□ 0.48
IRF3-223ENST00000599223 ALPK3Q96L96 1907 aa18.06■□□□□ 0.48
IRF3-223ENST00000599223 H0YGN5 161 aa18.06■□□□□ 0.48
IRF3-223ENST00000599223 RLBP1P12271 317 aa18.06■□□□□ 0.48
IRF3-223ENST00000599223 ELNP15502 786 aa18.06■□□□□ 0.48
IRF3-223ENST00000599223 HOXD10P28358 340 aa18.06■□□□□ 0.48
IRF3-223ENST00000599223 SHROOM1Q2M3G4 852 aaPredicted RBP18.06■□□□□ 0.48
IRF3-223ENST00000599223 ZKSCAN2Q63HK3 967 aa18.06■□□□□ 0.48
IRF3-223ENST00000599223 TEX11Q8IYF3 940 aa18.06■□□□□ 0.48
IRF3-223ENST00000599223 SSH3Q8TE77 659 aa18.06■□□□□ 0.48
IRF3-223ENST00000599223 SMCR8Q8TEV9 937 aaPredicted RBP18.06■□□□□ 0.48
IRF3-223ENST00000599223 DNAJC18Q9H819 358 aa18.06■□□□□ 0.48
IRF3-223ENST00000599223 TLR7Q9NYK1 1049 aaKnown RBP18.06■□□□□ 0.48
IRF3-223ENST00000599223 LRP2BPQ9P2M1 347 aa18.06■□□□□ 0.48
IRF3-223ENST00000599223 LDHCP07864 332 aa18.05■□□□□ 0.48
IRF3-223ENST00000599223 UQCRFS1P1P0C7P4 283 aa18.05■□□□□ 0.48
IRF3-223ENST00000599223 GJA8P48165 433 aa18.05■□□□□ 0.48
IRF3-223ENST00000599223 FLT3LGP49771 235 aa18.05■□□□□ 0.48
IRF3-223ENST00000599223 JAG1P78504 1218 aa18.05■□□□□ 0.48
IRF3-223ENST00000599223 ANKRD13CQ8N6S4 541 aa18.05■□□□□ 0.48
IRF3-223ENST00000599223 SLAIN1Q8ND83 568 aa18.05■□□□□ 0.48
IRF3-223ENST00000599223 UNC93B1Q9H1C4 597 aa18.05■□□□□ 0.48
IRF3-223ENST00000599223 AATFQ9NY61 560 aaKnown RBP eCLIP18.05■□□□□ 0.48
IRF3-223ENST00000599223 COLQQ9Y215 455 aaPredicted RBP18.05■□□□□ 0.48
IRF3-223ENST00000599223 DDX60LQ5H9U9 1706 aaKnown RBP18.05■□□□□ 0.48
IRF3-223ENST00000599223 MYH1P12882 1939 aa18.05■□□□□ 0.48
IRF3-223ENST00000599223 CYP2E1P05181 493 aaPredicted RBP18.04■□□□□ 0.48
IRF3-223ENST00000599223 GJB1P08034 283 aa18.04■□□□□ 0.48
IRF3-223ENST00000599223 FXR1P51114 621 aaKnown RBP eCLIP18.04■□□□□ 0.48
IRF3-223ENST00000599223 HMGCS2P54868 508 aa18.04■□□□□ 0.48
IRF3-223ENST00000599223 SPP2Q13103 211 aa18.04■□□□□ 0.48
IRF3-223ENST00000599223 RNF208Q9H0X6 261 aa18.04■□□□□ 0.48
IRF3-223ENST00000599223 DBNLQ9UJU6 430 aaKnown RBP18.04■□□□□ 0.48
IRF3-223ENST00000599223 FLT1P17948 1338 aa18.03■□□□□ 0.48
IRF3-223ENST00000599223 TNPO2O14787 897 aaKnown RBP18.03■□□□□ 0.48
IRF3-223ENST00000599223 ADCY3O60266 1144 aa18.03■□□□□ 0.48
IRF3-223ENST00000599223 MAP4K4O95819 1239 aaPredicted RBP18.03■□□□□ 0.48
IRF3-223ENST00000599223 INHAP05111 366 aa18.03■□□□□ 0.48
IRF3-223ENST00000599223 CAP2P40123 477 aa18.03■□□□□ 0.48
IRF3-223ENST00000599223 TTC39AQ5SRH9 613 aa18.03■□□□□ 0.48
IRF3-223ENST00000599223 NAA16Q6N069 864 aaPredicted RBP18.03■□□□□ 0.48
IRF3-223ENST00000599223 ZNF280CQ8ND82 737 aa18.03■□□□□ 0.48
IRF3-223ENST00000599223 GPR108Q9NPR9 543 aa18.03■□□□□ 0.48
IRF3-223ENST00000599223 PIH1D3Q9NQM4 214 aaKnown RBP18.03■□□□□ 0.48
IRF3-223ENST00000599223 BIN2Q9UBW5 565 aaPredicted RBP18.03■□□□□ 0.48
IRF3-223ENST00000599223 ATP8B2P98198 1209 aa18.02■□□□□ 0.48
IRF3-223ENST00000599223 OS9Q13438 667 aaPredicted RBP18.02■□□□□ 0.48
IRF3-223ENST00000599223 FAM110CQ1W6H9 321 aa18.02■□□□□ 0.48
IRF3-223ENST00000599223 MAPKAPK5Q8IW41 473 aa18.02■□□□□ 0.48
IRF3-223ENST00000599223 PROCA1Q8NCQ7 364 aaPredicted RBP18.02■□□□□ 0.48
IRF3-223ENST00000599223 U2AF1L4Q8WU68 220 aaKnown RBP18.02■□□□□ 0.48
IRF3-223ENST00000599223 LAMA3Q16787 3333 aa18.01■□□□□ 0.47
IRF3-223ENST00000599223 SURF6O75683 361 aaKnown RBP18.01■□□□□ 0.47
IRF3-223ENST00000599223 ZAP70P43403 619 aa18.01■□□□□ 0.47
IRF3-223ENST00000599223 IRF5Q13568 498 aa18.01■□□□□ 0.47
IRF3-223ENST00000599223 ITPRIPQ8IWB1 547 aa18.01■□□□□ 0.47
IRF3-223ENST00000599223 TGFBRAP1Q8WUH2 860 aa18.01■□□□□ 0.47
IRF3-223ENST00000599223 HERC5Q9UII4 1024 aaKnown RBP18.01■□□□□ 0.47
IRF3-223ENST00000599223 PEX10O60683 326 aa18■□□□□ 0.47
IRF3-223ENST00000599223 PPP4CP60510 307 aa18■□□□□ 0.47
IRF3-223ENST00000599223 UBXN2AP68543 259 aa18■□□□□ 0.47
IRF3-223ENST00000599223 HNRNPUQ00839 825 aaKnown RBP eCLIP18■□□□□ 0.472e-8■□□□□ 8.3
IRF3-223ENST00000599223 MTMR2Q13614 643 aa18■□□□□ 0.47
IRF3-223ENST00000599223 NKX2-3Q8TAU0 364 aa18■□□□□ 0.47
IRF3-223ENST00000599223 ASCC2Q9H1I8 757 aaPredicted RBP18■□□□□ 0.47
IRF3-223ENST00000599223 PI4KBQ9UBF8 816 aa18■□□□□ 0.47
IRF3-223ENST00000599223 PNMA3Q9UL41 463 aa18■□□□□ 0.47
IRF3-223ENST00000599223 NOP58Q9Y2X3 529 aaKnown RBP18■□□□□ 0.47
IRF3-223ENST00000599223 NDUFB9Q9Y6M9 179 aa18■□□□□ 0.47
IRF3-223ENST00000599223 NAV1Q8NEY1 1877 aa18■□□□□ 0.47
IRF3-223ENST00000599223 USP17L5A8MUK1 530 aa17.99■□□□□ 0.47
IRF3-223ENST00000599223 ZBTB7BO15156 539 aaPredicted RBP17.99■□□□□ 0.47
IRF3-223ENST00000599223 FARP2O94887 1054 aaPredicted RBP17.99■□□□□ 0.47
IRF3-223ENST00000599223 DYNLL1P63167 89 aaKnown RBP17.99■□□□□ 0.47
IRF3-223ENST00000599223 SH3D19Q5HYK7 790 aa17.99■□□□□ 0.47
IRF3-223ENST00000599223 CCDC158Q5M9N0 1113 aa17.99■□□□□ 0.47
IRF3-223ENST00000599223 METTL16Q86W50 562 aaKnown RBP17.99■□□□□ 0.47
IRF3-223ENST00000599223 FTSJ3Q8IY81 847 aaKnown RBP17.99■□□□□ 0.47
IRF3-223ENST00000599223 EAF2Q96CJ1 260 aaPredicted RBP17.99■□□□□ 0.47
IRF3-223ENST00000599223 ZNF512BQ96KM6 892 aaPredicted RBP17.99■□□□□ 0.47
IRF3-223ENST00000599223 NOL10Q9BSC4 688 aaKnown RBP17.99■□□□□ 0.47
IRF3-223ENST00000599223 SAP30BPQ9UHR5 308 aaKnown RBP17.99■□□□□ 0.47
IRF3-223ENST00000599223 TAOK2Q9UL54 1235 aa17.99■□□□□ 0.47
IRF3-223ENST00000599223 PALD1Q9ULE6 856 aa17.99■□□□□ 0.47
IRF3-223ENST00000599223 GDF11O95390 407 aa17.98■□□□□ 0.47
IRF3-223ENST00000599223 CHRDL2Q6WN34 429 aa17.98■□□□□ 0.47
IRF3-223ENST00000599223 PXYLP1Q8TE99 480 aa17.98■□□□□ 0.47
IRF3-223ENST00000599223 TBC1D2Q9BYX2 928 aa17.98■□□□□ 0.47
IRF3-223ENST00000599223 CCDC8Q9H0W5 538 aaPredicted RBP17.98■□□□□ 0.47
IRF3-223ENST00000599223 PAK6Q9NQU5 681 aaPredicted RBP17.98■□□□□ 0.47
IRF3-223ENST00000599223 SGPL1O95470 568 aa17.97■□□□□ 0.47
IRF3-223ENST00000599223 BAG3O95817 575 aa17.97■□□□□ 0.47
IRF3-223ENST00000599223 PLCG2P16885 1265 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms