RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 SHROOM1Q2M3G4 852 aaPredicted RBP14.81□□□□□ -0.04
LIG1-217ENST00000599165 SLFNL1Q499Z3 407 aa14.81□□□□□ -0.04
LIG1-217ENST00000599165 GPAT2Q6NUI2 795 aa14.81□□□□□ -0.04
LIG1-217ENST00000599165 AFG3L2Q9Y4W6 797 aa14.81□□□□□ -0.04
LIG1-217ENST00000599165 GOLIM4O00461 696 aa14.8□□□□□ -0.04
LIG1-217ENST00000599165 CTNND1O60716 968 aaKnown RBP14.8□□□□□ -0.04
LIG1-217ENST00000599165 PDE6AP16499 860 aa14.8□□□□□ -0.04
LIG1-217ENST00000599165 ATP5JP18859 108 aa14.8□□□□□ -0.04
LIG1-217ENST00000599165 OTUD7BQ6GQQ9 843 aa14.8□□□□□ -0.04
LIG1-217ENST00000599165 CD99L2Q8TCZ2 262 aa14.8□□□□□ -0.04
LIG1-217ENST00000599165 LRRCC1Q9C099 1032 aa14.8□□□□□ -0.04
LIG1-217ENST00000599165 ZCCHC17Q9NP64 241 aaKnown RBP14.8□□□□□ -0.04
LIG1-217ENST00000599165 PALD1Q9ULE6 856 aa14.8□□□□□ -0.04
LIG1-217ENST00000599165 HPS5Q9UPZ3 1129 aa14.8□□□□□ -0.04
LIG1-217ENST00000599165 ZHX2Q9Y6X8 837 aa14.8□□□□□ -0.04
LIG1-217ENST00000599165 A0A0G2JLL6 359 aaPredicted RBP14.79□□□□□ -0.04
LIG1-217ENST00000599165 CXCL11O14625 94 aa14.79□□□□□ -0.04
LIG1-217ENST00000599165 PLCG2P16885 1265 aa14.79□□□□□ -0.04
LIG1-217ENST00000599165 MAP3K12Q12852 859 aa14.79□□□□□ -0.04
LIG1-217ENST00000599165 OTOP1Q7RTM1 612 aa14.79□□□□□ -0.04
LIG1-217ENST00000599165 PRRT2Q7Z6L0 340 aaPredicted RBP14.79□□□□□ -0.04
LIG1-217ENST00000599165 ANKRD23Q86SG2 305 aa14.79□□□□□ -0.04
LIG1-217ENST00000599165 CRBNQ96SW2 442 aa14.79□□□□□ -0.04
LIG1-217ENST00000599165 DNAJC2Q99543 621 aaKnown RBP14.79□□□□□ -0.04
LIG1-217ENST00000599165 BCL11AQ9H165 835 aa14.79□□□□□ -0.04
LIG1-217ENST00000599165 BOLA2Q9H3K6 86 aa14.79□□□□□ -0.04
LIG1-217ENST00000599165 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.79□□□□□ -0.04
LIG1-217ENST00000599165 BAZ2AQ9UIF9 1905 aaKnown RBP14.78□□□□□ -0.04
LIG1-217ENST00000599165 TLR2O60603 784 aa14.78□□□□□ -0.04
LIG1-217ENST00000599165 CTGFP29279 349 aa14.78□□□□□ -0.04
LIG1-217ENST00000599165 CAP2P40123 477 aa14.78□□□□□ -0.04
LIG1-217ENST00000599165 SP3Q02447 781 aa14.78□□□□□ -0.04
LIG1-217ENST00000599165 EVX2Q03828 476 aa14.78□□□□□ -0.04
LIG1-217ENST00000599165 HAUS7Q99871 368 aa14.78□□□□□ -0.04
LIG1-217ENST00000599165 NOL10Q9BSC4 688 aaKnown RBP14.78□□□□□ -0.04
LIG1-217ENST00000599165 DHX36Q9H2U1 1008 aaKnown RBP14.78□□□□□ -0.04
LIG1-217ENST00000599165 ZFYVE28Q9HCC9 887 aa14.78□□□□□ -0.04
LIG1-217ENST00000599165 PI4KBQ9UBF8 816 aa14.78□□□□□ -0.04
LIG1-217ENST00000599165 SAP30BPQ9UHR5 308 aaKnown RBP14.78□□□□□ -0.04
LIG1-217ENST00000599165 ZNF532Q9HCE3 1301 aa14.77□□□□□ -0.04
LIG1-217ENST00000599165 CENPFP49454 3210 aa14.77□□□□□ -0.04
LIG1-217ENST00000599165 PDHXO00330 501 aa14.77□□□□□ -0.05
LIG1-217ENST00000599165 RGS19P49795 217 aa14.77□□□□□ -0.05
LIG1-217ENST00000599165 TTF1Q15361 905 aaPredicted RBP14.77□□□□□ -0.05
LIG1-217ENST00000599165 PKN2Q16513 984 aaKnown RBP14.77□□□□□ -0.05
LIG1-217ENST00000599165 SLC4A8Q2Y0W8 1093 aa14.77□□□□□ -0.05
LIG1-217ENST00000599165 SLC9C2Q5TAH2 1124 aa14.77□□□□□ -0.05
LIG1-217ENST00000599165 FBXO46Q6PJ61 603 aaPredicted RBP14.77□□□□□ -0.05
LIG1-217ENST00000599165 TMED8Q6PL24 325 aaPredicted RBP14.77□□□□□ -0.05
LIG1-217ENST00000599165 C17orf99Q6UX52 265 aa14.77□□□□□ -0.05
LIG1-217ENST00000599165 ARHGAP39Q9C0H5 1083 aa14.77□□□□□ -0.05
LIG1-217ENST00000599165 PICK1Q9NRD5 415 aa14.77□□□□□ -0.05
LIG1-217ENST00000599165 PAG1Q9NWQ8 432 aa14.77□□□□□ -0.05
LIG1-217ENST00000599165 HERC5Q9UII4 1024 aaKnown RBP14.77□□□□□ -0.05
LIG1-217ENST00000599165 TRIM17Q9Y577 477 aa14.77□□□□□ -0.05
LIG1-217ENST00000599165 MGAMO43451 1857 aa14.77□□□□□ -0.05
LIG1-217ENST00000599165 ADD2P35612 726 aa14.76□□□□□ -0.05
LIG1-217ENST00000599165 TSHZ3Q63HK5 1081 aa14.76□□□□□ -0.05
LIG1-217ENST00000599165 LCORLQ8N3X6 602 aa14.76□□□□□ -0.05
LIG1-217ENST00000599165 ERO1AQ96HE7 468 aa14.76□□□□□ -0.05
LIG1-217ENST00000599165 DOCK3Q8IZD9 2030 aa14.75□□□□□ -0.05
LIG1-217ENST00000599165 TRIM75PA6NK02 468 aa14.75□□□□□ -0.05
LIG1-217ENST00000599165 CYP2C8P10632 490 aa14.75□□□□□ -0.05
LIG1-217ENST00000599165 FOXP4Q8IVH2 680 aaPredicted RBP14.75□□□□□ -0.05
LIG1-217ENST00000599165 OTUD7AQ8TE49 926 aaPredicted RBP14.75□□□□□ -0.05
LIG1-217ENST00000599165 CPA4Q9UI42 421 aa14.75□□□□□ -0.05
LIG1-217ENST00000599165 KIAA0100Q14667 2235 aaKnown RBP14.75□□□□□ -0.05
LIG1-217ENST00000599165 BRCA2P51587 3418 aa14.74□□□□□ -0.05
LIG1-217ENST00000599165 MAGEB6P1A0A0J9YX57 407 aa14.74□□□□□ -0.05
LIG1-217ENST00000599165 BCRP11274 1271 aa14.74□□□□□ -0.05
LIG1-217ENST00000599165 PLCD1P51178 756 aa14.74□□□□□ -0.05
LIG1-217ENST00000599165 LACTBP83111 547 aaPredicted RBP14.74□□□□□ -0.05
LIG1-217ENST00000599165 SPP2Q13103 211 aa14.74□□□□□ -0.05
LIG1-217ENST00000599165 TREML2Q5T2D2 321 aa14.74□□□□□ -0.05
LIG1-217ENST00000599165 ECHDC1Q9NTX5 307 aa14.74□□□□□ -0.05
LIG1-217ENST00000599165 PTPN22Q9Y2R2 807 aa14.74□□□□□ -0.05
LIG1-217ENST00000599165 RBBP6Q7Z6E9 1792 aaKnown RBP14.74□□□□□ -0.05
LIG1-217ENST00000599165 SALL3Q9BXA9 1300 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 SMIM22K7EJ46 135 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 PRKAB2O43741 272 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 GDF11O95390 407 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 USP5P45974 858 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 SOX10P56693 466 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 GABPAQ06546 454 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 TATDN1Q6P1N9 297 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 CERS3Q8IU89 383 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 ZNF280CQ8ND82 737 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 SDR42E1Q8WUS8 393 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 EHD4Q9H223 541 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 ARMT1Q9H993 441 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 EFCC1Q9HA90 598 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 ZBTB21Q9ULJ3 1066 aa14.73□□□□□ -0.05
LIG1-217ENST00000599165 MYH8P13535 1937 aa14.72□□□□□ -0.05
LIG1-217ENST00000599165 CYP2D6P10635 497 aa14.72□□□□□ -0.05
LIG1-217ENST00000599165 SHMT1P34896 483 aa14.72□□□□□ -0.05
LIG1-217ENST00000599165 SH3D19Q5HYK7 790 aa14.72□□□□□ -0.05
LIG1-217ENST00000599165 GADL1Q6ZQY3 521 aa14.72□□□□□ -0.05
LIG1-217ENST00000599165 FASTKD5Q7L8L6 764 aaKnown RBP14.72□□□□□ -0.05
LIG1-217ENST00000599165 PI4K2BQ8TCG2 481 aa14.72□□□□□ -0.05
LIG1-217ENST00000599165 WDR18Q9BV38 432 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms