RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 SDR42E1Q8WUS8 393 aa17.76■□□□□ 0.43
PNKP-204ENST00000594661 ZNF622Q969S3 477 aaKnown RBP eCLIP17.76■□□□□ 0.43
PNKP-204ENST00000594661 NSUN4Q96CB9 384 aaKnown RBP17.76■□□□□ 0.43
PNKP-204ENST00000594661 LLPHQ9BRT6 129 aaKnown RBP17.76■□□□□ 0.43
PNKP-204ENST00000594661 CHD4Q14839 1912 aa17.76■□□□□ 0.43
PNKP-204ENST00000594661 WDR19Q8NEZ3 1342 aa17.76■□□□□ 0.43
PNKP-204ENST00000594661 CASQ1P31415 396 aa17.75■□□□□ 0.43
PNKP-204ENST00000594661 MECOMQ03112 1051 aa17.75■□□□□ 0.43
PNKP-204ENST00000594661 POTEAQ6S8J7 498 aa17.75■□□□□ 0.43
PNKP-204ENST00000594661 MYCBPQ99417 103 aaPredicted RBP17.75■□□□□ 0.43
PNKP-204ENST00000594661 NCAPGQ9BPX3 1015 aa17.75■□□□□ 0.43
PNKP-204ENST00000594661 NACAP1Q9BZK3 213 aa17.75■□□□□ 0.43
PNKP-204ENST00000594661 ZNF215Q9UL58 517 aaPredicted RBP17.75■□□□□ 0.43
PNKP-204ENST00000594661 LOC102724159A0A0B4J2E5 919 aa17.75■□□□□ 0.43
PNKP-204ENST00000594661 H3BQV1 296 aa17.75■□□□□ 0.43
PNKP-204ENST00000594661 PWP2Q15269 919 aaKnown RBP17.75■□□□□ 0.43
PNKP-204ENST00000594661 IFFO2Q5TF58 517 aa17.75■□□□□ 0.43
PNKP-204ENST00000594661 CEP135Q66GS9 1140 aa17.75■□□□□ 0.43
PNKP-204ENST00000594661 NLGN1Q8N2Q7 840 aa17.75■□□□□ 0.43
PNKP-204ENST00000594661 NRXN2Q9P2S2 1712 aa17.75■□□□□ 0.43
PNKP-204ENST00000594661 MAST2Q6P0Q8 1798 aa17.74■□□□□ 0.43
PNKP-204ENST00000594661 KLF18A0A0U1RQI7 1052 aa17.74■□□□□ 0.43
PNKP-204ENST00000594661 PTPDC1A2A3K4 754 aa17.74■□□□□ 0.43
PNKP-204ENST00000594661 PLCB2Q00722 1185 aa17.74■□□□□ 0.43
PNKP-204ENST00000594661 UFL1O94874 794 aa17.74■□□□□ 0.43
PNKP-204ENST00000594661 H2AFXP16104 143 aaPredicted RBP17.74■□□□□ 0.43
PNKP-204ENST00000594661 TTC6Q86TZ1 520 aa17.74■□□□□ 0.43
PNKP-204ENST00000594661 SALL1Q9NSC2 1324 aa17.73■□□□□ 0.43
PNKP-204ENST00000594661 PPFIA3O75145 1194 aa17.73■□□□□ 0.43
PNKP-204ENST00000594661 BBOX1O75936 387 aa17.73■□□□□ 0.43
PNKP-204ENST00000594661 GUCY2CP25092 1073 aa17.73■□□□□ 0.43
PNKP-204ENST00000594661 AKNAD1Q5T1N1 836 aa17.73■□□□□ 0.43
PNKP-204ENST00000594661 RAB11FIP4Q86YS3 637 aa17.73■□□□□ 0.43
PNKP-204ENST00000594661 CRAMP1Q96RY5 1269 aa17.73■□□□□ 0.43
PNKP-204ENST00000594661 BCCIPQ9P287 314 aaKnown RBP eCLIP17.73■□□□□ 0.43
PNKP-204ENST00000594661 HPS5Q9UPZ3 1129 aa17.73■□□□□ 0.43
PNKP-204ENST00000594661 FHOD1Q9Y613 1164 aa17.73■□□□□ 0.43
PNKP-204ENST00000594661 GOLGA8BA8MQT2 603 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 SH2B2O14492 632 aaPredicted RBP17.72■□□□□ 0.43
PNKP-204ENST00000594661 SYT10Q6XYQ8 523 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 C15orf52Q6ZUT6 534 aaKnown RBP17.72■□□□□ 0.43
PNKP-204ENST00000594661 TDRD7Q8NHU6 1098 aaKnown RBP17.72■□□□□ 0.43
PNKP-204ENST00000594661 RGPD3A6NKT7 1758 aaPredicted RBP17.72■□□□□ 0.43
PNKP-204ENST00000594661 RGPD4Q7Z3J3 1758 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 MYO1CO00159 1063 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 ELF2Q15723 593 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 TEX35Q5T0J7 233 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 CCDC186Q7Z3E2 898 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 ZNF804AQ7Z570 1209 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 STK11IPQ8N1F8 1099 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 FLAD1Q8NFF5 587 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 STAG1Q8WVM7 1258 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 SCAND2PQ9GZW5 306 aaPredicted RBP17.72■□□□□ 0.43
PNKP-204ENST00000594661 SENP2Q9HC62 589 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 TFIP11Q9UBB9 837 aaKnown RBP17.72■□□□□ 0.43
PNKP-204ENST00000594661 GGA1Q9UJY5 639 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 ANGEL1Q9UNK9 670 aaKnown RBP17.72■□□□□ 0.43
PNKP-204ENST00000594661 LRRC37AA6NMS7 1700 aa17.72■□□□□ 0.43
PNKP-204ENST00000594661 ELP1O95163 1332 aa17.71■□□□□ 0.43
PNKP-204ENST00000594661 SMIM22K7EJ46 135 aa17.71■□□□□ 0.43
PNKP-204ENST00000594661 MMP10P09238 476 aa17.71■□□□□ 0.43
PNKP-204ENST00000594661 ATP2B4P23634 1241 aa17.71■□□□□ 0.43
PNKP-204ENST00000594661 PPARAQ07869 468 aa17.71■□□□□ 0.43
PNKP-204ENST00000594661 LRMPQ12912 555 aa17.71■□□□□ 0.43
PNKP-204ENST00000594661 TPD52L1Q16890 204 aaPredicted RBP17.71■□□□□ 0.43
PNKP-204ENST00000594661 MSL1Q68DK7 614 aa17.71■□□□□ 0.43
PNKP-204ENST00000594661 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.71■□□□□ 0.43
PNKP-204ENST00000594661 BRIP1Q9BX63 1249 aa17.71■□□□□ 0.43
PNKP-204ENST00000594661 CCDC88AQ3V6T2 1871 aa17.71■□□□□ 0.43
PNKP-204ENST00000594661 LTBP1Q14766 1721 aa17.71■□□□□ 0.43
PNKP-204ENST00000594661 FOSBP53539 338 aa17.71■□□□□ 0.42
PNKP-204ENST00000594661 RESTQ13127 1097 aa17.71■□□□□ 0.42
PNKP-204ENST00000594661 MFSD6Q6ZSS7 791 aa17.71■□□□□ 0.42
PNKP-204ENST00000594661 SPATA32Q96LK8 384 aa17.71■□□□□ 0.42
PNKP-204ENST00000594661 AATFQ9NY61 560 aaKnown RBP eCLIP17.71■□□□□ 0.42
PNKP-204ENST00000594661 ZSWIM5Q9P217 1185 aa17.71■□□□□ 0.42
PNKP-204ENST00000594661 POLLQ9UGP5 575 aa17.71■□□□□ 0.42
PNKP-204ENST00000594661 BAZ2AQ9UIF9 1905 aaKnown RBP17.7■□□□□ 0.42
PNKP-204ENST00000594661 IGDCC4Q8TDY8 1250 aa17.7■□□□□ 0.42
PNKP-204ENST00000594661 ZSCAN16Q9H4T2 348 aaPredicted RBP17.7■□□□□ 0.42
PNKP-204ENST00000594661 CNNM2Q9H8M5 875 aa17.7■□□□□ 0.42
PNKP-204ENST00000594661 COL11A2P13942 1736 aaPredicted RBP17.69■□□□□ 0.42
PNKP-204ENST00000594661 MINDY4BA8MYZ0 360 aa17.69■□□□□ 0.42
PNKP-204ENST00000594661 PPEF1O14829 653 aaPredicted RBP17.69■□□□□ 0.42
PNKP-204ENST00000594661 MYCNP04198 464 aaPredicted RBP17.69■□□□□ 0.42
PNKP-204ENST00000594661 PLA2G4AP47712 749 aa17.69■□□□□ 0.42
PNKP-204ENST00000594661 GRIK5Q16478 980 aa17.69■□□□□ 0.42
PNKP-204ENST00000594661 RRP12Q5JTH9 1297 aaKnown RBP17.69■□□□□ 0.42
PNKP-204ENST00000594661 NYAP1Q6ZVC0 841 aa17.69■□□□□ 0.42
PNKP-204ENST00000594661 DHX37Q8IY37 1157 aaKnown RBP17.69■□□□□ 0.42
PNKP-204ENST00000594661 TBC1D16Q8TBP0 767 aa17.69■□□□□ 0.42
PNKP-204ENST00000594661 TMEM87BQ96K49 555 aa17.69■□□□□ 0.42
PNKP-204ENST00000594661 LY9Q9HBG7 655 aa17.69■□□□□ 0.42
PNKP-204ENST00000594661 SRGNP10124 158 aa17.69■□□□□ 0.42
PNKP-204ENST00000594661 DZIP1Q86YF9 867 aaKnown RBP17.69■□□□□ 0.42
PNKP-204ENST00000594661 WDR66Q8TBY9 1149 aa17.69■□□□□ 0.42
PNKP-204ENST00000594661 LEO1Q8WVC0 666 aaPredicted RBP17.69■□□□□ 0.42
PNKP-204ENST00000594661 KRT23Q9C075 422 aa17.69■□□□□ 0.42
PNKP-204ENST00000594661 CD209Q9NNX6 404 aa17.69■□□□□ 0.42
PNKP-204ENST00000594661 CYP2D7A0A087X1C5 515 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms