RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SULF1Q8IWU6 871 aa15.97■□□□□ 0.15
VMP1-217ENST00000593168 TTC14Q96N46 770 aa15.97■□□□□ 0.15
VMP1-217ENST00000593168 ALDH8A1Q9H2A2 487 aaPredicted RBP15.97■□□□□ 0.15
VMP1-217ENST00000593168 ATP8A2Q9NTI2 1148 aa15.97■□□□□ 0.15
VMP1-217ENST00000593168 MYH2Q9UKX2 1941 aa15.96■□□□□ 0.15
VMP1-217ENST00000593168 PAPPA2Q9BXP8 1791 aa15.96■□□□□ 0.15
VMP1-217ENST00000593168 E7EWF7 191 aa15.96■□□□□ 0.15
VMP1-217ENST00000593168 PLCG2P16885 1265 aa15.96■□□□□ 0.15
VMP1-217ENST00000593168 RPS6KB1P23443 525 aa15.96■□□□□ 0.15
VMP1-217ENST00000593168 SLC4A3P48751 1232 aa15.96■□□□□ 0.15
VMP1-217ENST00000593168 TDO2P48775 406 aa15.96■□□□□ 0.15
VMP1-217ENST00000593168 HHIPL2Q6UWX4 724 aa15.96■□□□□ 0.15
VMP1-217ENST00000593168 STOX1Q6ZVD7 989 aa15.96■□□□□ 0.15
VMP1-217ENST00000593168 RASAL3Q86YV0 1011 aa15.96■□□□□ 0.15
VMP1-217ENST00000593168 TTF2Q9UNY4 1162 aaKnown RBP15.96■□□□□ 0.15
VMP1-217ENST00000593168 ANGEL2Q5VTE6 544 aaKnown RBP15.95■□□□□ 0.14
VMP1-217ENST00000593168 SDR42E1Q8WUS8 393 aa15.95■□□□□ 0.14
VMP1-217ENST00000593168 MXD3Q9BW11 206 aa15.95■□□□□ 0.14
VMP1-217ENST00000593168 PDRG1Q9NUG6 133 aa15.95■□□□□ 0.14
VMP1-217ENST00000593168 MYO3BQ8WXR4 1341 aa15.94■□□□□ 0.14
VMP1-217ENST00000593168 ZNF646O15015 1829 aaPredicted RBP15.94■□□□□ 0.14
VMP1-217ENST00000593168 BTDP43251 543 aa15.94■□□□□ 0.14
VMP1-217ENST00000593168 ZNF280AP59817 542 aaPredicted RBP15.94■□□□□ 0.14
VMP1-217ENST00000593168 HAND2P61296 217 aa15.94■□□□□ 0.14
VMP1-217ENST00000593168 DHX32Q7L7V1 743 aaKnown RBP15.94■□□□□ 0.14
VMP1-217ENST00000593168 CTU1Q7Z7A3 348 aaKnown RBP15.94■□□□□ 0.14
VMP1-217ENST00000593168 DCP1AQ9NPI6 582 aaPredicted RBP15.94■□□□□ 0.14
VMP1-217ENST00000593168 ANAPC4Q9UJX5 808 aa15.94■□□□□ 0.14
VMP1-217ENST00000593168 DAGLAQ9Y4D2 1042 aa15.94■□□□□ 0.14
VMP1-217ENST00000593168 F8W031 263 aaPredicted RBP15.93■□□□□ 0.14
VMP1-217ENST00000593168 CPA1P15085 419 aa15.93■□□□□ 0.14
VMP1-217ENST00000593168 SBK1Q52WX2 424 aa15.93■□□□□ 0.14
VMP1-217ENST00000593168 RSBN1LQ6PCB5 846 aaPredicted RBP15.93■□□□□ 0.14
VMP1-217ENST00000593168 NCOA7Q8NI08 942 aa15.93■□□□□ 0.14
VMP1-217ENST00000593168 SH3RF3Q8TEJ3 882 aaPredicted RBP15.93■□□□□ 0.14
VMP1-217ENST00000593168 TEKT1Q969V4 418 aa15.93■□□□□ 0.14
VMP1-217ENST00000593168 SCAF8Q9UPN6 1271 aaKnown RBP15.93■□□□□ 0.14
VMP1-217ENST00000593168 LAMA4Q16363 1823 aa15.92■□□□□ 0.14
VMP1-217ENST00000593168 AK2P54819 239 aa15.92■□□□□ 0.14
VMP1-217ENST00000593168 RHBDL3P58872 404 aa15.92■□□□□ 0.14
VMP1-217ENST00000593168 EXOSC10Q01780 885 aaKnown RBP15.92■□□□□ 0.14
VMP1-217ENST00000593168 TRDNQ13061 729 aa15.92■□□□□ 0.14
VMP1-217ENST00000593168 ANKRD1Q15327 319 aa15.92■□□□□ 0.14
VMP1-217ENST00000593168 MOB2Q70IA6 237 aa15.92■□□□□ 0.14
VMP1-217ENST00000593168 AGBL3Q8NEM8 1001 aa15.92■□□□□ 0.14
VMP1-217ENST00000593168 GMLQ99445 158 aa15.92■□□□□ 0.14
VMP1-217ENST00000593168 NBPF3Q9H094 633 aa15.92■□□□□ 0.14
VMP1-217ENST00000593168 PCP11498 1178 aaKnown RBP15.91■□□□□ 0.14
VMP1-217ENST00000593168 USP5P45974 858 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 CRKP46108 304 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 PPARAQ07869 468 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 AKNAD1Q5T1N1 836 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 CTR9Q6PD62 1173 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 TBC1D10CQ8IV04 446 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 KIAA0825Q8IV33 1275 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 REM2Q8IYK8 340 aaPredicted RBP15.91■□□□□ 0.14
VMP1-217ENST00000593168 FBXL16Q8N461 479 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 STAG1Q8WVM7 1258 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 ZSCAN31Q96LW9 406 aaPredicted RBP15.91■□□□□ 0.14
VMP1-217ENST00000593168 ZDHHC15Q96MV8 337 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 RNF41Q9H4P4 317 aaPredicted RBP15.91■□□□□ 0.14
VMP1-217ENST00000593168 MYOZ2Q9NPC6 264 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 ARPP21Q9UBL0 812 aaPredicted RBP15.91■□□□□ 0.14
VMP1-217ENST00000593168 SERPINA10Q9UK55 444 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 LIMCH1Q9UPQ0 1083 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 HPS5Q9UPZ3 1129 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 WDR19Q8NEZ3 1342 aa15.91■□□□□ 0.14
VMP1-217ENST00000593168 USP17L12C9JPN9 530 aa15.9■□□□□ 0.14
VMP1-217ENST00000593168 USP17L21D6R901 530 aa15.9■□□□□ 0.14
VMP1-217ENST00000593168 MCM5P33992 734 aa15.9■□□□□ 0.14
VMP1-217ENST00000593168 FKBP1BP68106 108 aa15.9■□□□□ 0.14
VMP1-217ENST00000593168 COL9A3Q14050 684 aaPredicted RBP15.9■□□□□ 0.14
VMP1-217ENST00000593168 APOBEC3HQ6NTF7 200 aaKnown RBP15.9■□□□□ 0.14
VMP1-217ENST00000593168 MFSD6Q6ZSS7 791 aa15.9■□□□□ 0.14
VMP1-217ENST00000593168 RALYLQ86SE5 291 aaKnown RBP15.9■□□□□ 0.14
VMP1-217ENST00000593168 MB21D2Q8IYB1 491 aaPredicted RBP15.9■□□□□ 0.14
VMP1-217ENST00000593168 TEX11Q8IYF3 940 aa15.9■□□□□ 0.14
VMP1-217ENST00000593168 TGFBRAP1Q8WUH2 860 aa15.9■□□□□ 0.14
VMP1-217ENST00000593168 TMX3Q96JJ7 454 aa15.9■□□□□ 0.14
VMP1-217ENST00000593168 AGXT2Q9BYV1 514 aa15.9■□□□□ 0.14
VMP1-217ENST00000593168 CNNM2Q9H8M5 875 aa15.9■□□□□ 0.14
VMP1-217ENST00000593168 MINDY4BA8MYZ0 360 aa15.89■□□□□ 0.13
VMP1-217ENST00000593168 UBE2Q2LH0YL09 131 aa15.89■□□□□ 0.13
VMP1-217ENST00000593168 FGRP09769 529 aa15.89■□□□□ 0.13
VMP1-217ENST00000593168 USP17L8P0C7I0 530 aa15.89■□□□□ 0.13
VMP1-217ENST00000593168 MMP14P50281 582 aa15.89■□□□□ 0.13
VMP1-217ENST00000593168 CTDSPL2Q05D32 466 aa15.89■□□□□ 0.13
VMP1-217ENST00000593168 CUL4AQ13619 759 aa15.89■□□□□ 0.13
VMP1-217ENST00000593168 PRPF38BQ5VTL8 546 aaKnown RBP15.89■□□□□ 0.13
VMP1-217ENST00000593168 PRAMEF18Q5VWM3 479 aa15.89■□□□□ 0.13
VMP1-217ENST00000593168 KRT23Q9C075 422 aa15.89■□□□□ 0.13
VMP1-217ENST00000593168 PITPNM2Q9BZ72 1349 aa15.89■□□□□ 0.13
VMP1-217ENST00000593168 TBC1D8O95759 1140 aa15.88■□□□□ 0.13
VMP1-217ENST00000593168 SLC3A2P08195 630 aaKnown RBP15.88■□□□□ 0.13
VMP1-217ENST00000593168 NT5C2P49902 561 aa15.88■□□□□ 0.13
VMP1-217ENST00000593168 TOB2Q14106 344 aaPredicted RBP15.88■□□□□ 0.13
VMP1-217ENST00000593168 C12orf60Q5U649 245 aa15.88■□□□□ 0.13
VMP1-217ENST00000593168 Q6ZUG5 572 aa15.88■□□□□ 0.13
VMP1-217ENST00000593168 AMOTL1Q8IY63 956 aa15.88■□□□□ 0.13
VMP1-217ENST00000593168 ZNF296Q8WUU4 475 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms